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CHECK HERE FOR DESCRIPTIONS OF NEWLY CHARACTERIZED MAIZE GENES!

With the overwhelming number of genes that are being discovered by phenotypic and sequence analyses, the MaizeGDB staff is missing some that should be included in MaizeGDB. We need your help! Please let us know about new genes that you're working on or have recently read about.

Below is a list of newly reported or newly characterized genes (new reference, new gene product, and/or new variation) with which you may not yet be familiar. The genes are sorted by the last time the gene has been updated. To suggest genes for inclusion in this list, email us and include the gene name, full name, chromosome or bin, and a recent reference.

If you cannot find the gene you would like to recommend in the database, send us an email so that we can add it to the database!

This page is based on our monthly release. The most recent updates can be found on our curation site or by clicking the Most Recent Data option in the menu below.


         Recommended Genes


Most recent data | Six months | One year | All time

New or updated genes since one year ago. The cutoff date is February 19th, 2018

Last UpdateGeneFull Name : DescriptionChromosome
or Bin
Gene
Model
Recent ReferenceOrthologsUpdate information
yesterdayrth2 roothair defective2: root hairs elongate 1/5-1/4 of normal; plants are vigorous and show little nutritional deficiency
5.04 - 5.09
   Klamer, F et al. 2019. Ann Bot pp.doi: 10.1093/aob/mcz011     Reference: February 18th, 2019
Variation: September 1st, 2003
yesterdayIDP232  :
2.02
GRMZM5G876898
    Variation: March 31st, 2005
Gene Model: February 18th, 2019
yesterdayIDP2388  :
2.02
GRMZM2G007914
    Variation: March 31st, 2005
Gene Model: February 18th, 2019
yesterdayIDP53  :
2.01
GRMZM2G407347
    Gene Product: March 25th, 2010
Gene Model: February 18th, 2019
yesterdayIDP776  :
2.01
GRMZM2G065012
    Variation: March 31st, 2005
Gene Model: February 18th, 2019
yesterdayrad51b recombination protein51 gene b: one of two loci producing cDNA homologous to yeast protein required with Dmc1 protein for meiotic homologous recombination
3.05
GRMZM2G084762
Liu, F et al. 2019. Int J Mol Sci 20:807     Reference: February 18th, 2019
Gene Product: August 12th, 2016
Variation: May 13th, 2012
Gene Model: June 19th, 2014
yesterdayrad51a recombination protein51 gene a: one of two loci producing cDNA homologous to yeast protein required with Dmc1 protein for meiotic homologous recombination
7.04
GRMZM2G121543
Liu, F et al. 2019. Int J Mol Sci 20:807     Reference: February 18th, 2019
Gene Product: August 12th, 2016
Variation: April 19th, 2012
Gene Model: June 19th, 2014
2 days agozim32 ZIM-transcription factor 32: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Yilmaz, A et al. 2009. Plant Physiol 149:171-180     Reference: May 12th, 2011
Variation: February 17th, 2019
3 days agoIDP1478  :
1.11
GRMZM2G001661
    Variation: March 31st, 2005
Gene Model: February 16th, 2019
3 days agoIDP1633  :
1.11
GRMZM2G004459
    Variation: March 31st, 2005
Gene Model: February 16th, 2019
3 days agomagi24643  :
1.10
GRMZM2G120596
    Variation: March 31st, 2005
Gene Model: February 16th, 2019
3 days agoIDP2395  :
1.10
GRMZM2G031870
    Variation: March 31st, 2005
Gene Model: February 16th, 2019
3 days agoIDP2400  :
1.12
GRMZM2G021642
    Variation: March 31st, 2005
Gene Model: February 16th, 2019
3 days agoIDP340  :
1.09
GRMZM2G042040
    Variation: March 31st, 2005
Gene Model: February 16th, 2019
3 days agoIDP538  :
1.11
GRMZM2G062289
    Variation: March 31st, 2005
Gene Model: February 16th, 2019
3 days agoIDP603  :
1.11
GRMZM2G024267
    Variation: March 31st, 2005
Gene Model: February 16th, 2019
3 days agomagi62468  :
1.12
GRMZM2G023242
    Variation: March 31st, 2005
Gene Model: February 16th, 2019
3 days agoIDP72  :
1.11
GRMZM5G878153
    Variation: March 31st, 2005
Gene Model: February 16th, 2019
3 days agoIDP738  :
1.10
GRMZM2G443453
    Variation: March 31st, 2005
Gene Model: February 16th, 2019
3 days agoIDP772  :
1.11
GRMZM2G477609
    Variation: March 31st, 2005
Gene Model: February 16th, 2019
3 days agomagi7806  :
1.10
GRMZM2G165619
    Variation: March 31st, 2005
Gene Model: February 16th, 2019
4 days agocah6 carbonic anhydrase6: predicted beta carbonic anhydrase
8.06
GRMZM2G094165
Kolbe, AR et al. 2019. BMC Genomics 20:138     Reference: February 15th, 2019
Gene Product: August 5th, 2014
Gene Model: July 31st, 2014
4 days agorbm48 RNA binding motif protein 48: Encodes a U12 splicing factor; mutants have a rough endosperm phenotype
 
GRMZM2G163247
Bai, F et al. 2019. Plant Cell pp.doi: 10.1105/tpc.18.00754     Reference: February 15th, 2019
Gene Product: February 15th, 2019
Variation: February 15th, 2019
Gene Model: February 15th, 2019
4 days agocah2 carbonic anhydrase2: with cah1 promotes leaf CO2 availability for photosynthesis (Studer et al 2014)
 
GRMZM2G348512
Kolbe, AR et al. 2019. BMC Genomics 20:138     Reference: February 15th, 2019
Gene Product: August 5th, 2014
Variation: May 25th, 2018
Gene Model: July 31st, 2014
4 days agorgh3 rough endosperm3: Mature rgh3 seeds show a rough, etched, or pitted endosperm surface as well as a reduced seed size
 
GRMZM5G849788
Bai, F et al. 2019. Plant Cell pp.doi: 10.1105/tpc.18.00754     Reference: February 15th, 2019
Gene Product: December 29th, 2011
Variation: December 29th, 2011
Gene Model: April 29th, 2013
4 days agocah1 carbonic anhydrase1: C4 carbonic anhydrase; higher transcripts in mesophyll cells (Tausta 2014); double mutants with cah2 virutally remove this activity from leaf (Studer et al 2014).
 
GRMZM2G121878
Kolbe, AR et al. 2019. BMC Genomics 20:138     Reference: February 15th, 2019
Gene Product: August 5th, 2014
Variation: May 25th, 2018
Gene Model: July 31st, 2014
4 days agocah4 carbonic anhydrase4: putative mitochondrial carbonic anhydrase (Studer et al 2014)
 
GRMZM2G414528
Kolbe, AR et al. 2019. BMC Genomics 20:138     Reference: February 15th, 2019
Gene Product: August 5th, 2014
Gene Model: July 31st, 2014
4 days agocah5 carbonic anhydrase5: predicted mitochondrial carbonic anhydrase
 
GRMZM2G145101
Kolbe, AR et al. 2019. BMC Genomics 20:138     Reference: February 15th, 2019
Gene Product: August 5th, 2014
Gene Model: July 31st, 2014
4 days agoplt5 phospholipid transfer protein homolog5:
 
GRMZM2G005991
Wei, KF; Zhong, XJ. 2014. BMC Plant Biology 4:281     Reference: January 6th, 2017
Gene Product: September 1st, 2003
Variation: February 15th, 2019
Gene Model: January 6th, 2017
4 days agoIDP2450  : similar to P-loop containing nucleoside triphosphate hydrolase-like protein of A. thaliana
1.10
GRMZM5G837018
    Variation: March 31st, 2005
Gene Model: February 15th, 2019
4 days agoIDP352  :
1.08
GRMZM2G015005
    Variation: March 31st, 2005
Gene Model: February 15th, 2019
4 days agoIDP437  :
1.09
GRMZM2G038217
    Variation: May 12th, 2006
Gene Model: February 15th, 2019
4 days agoIDP630  :
1.08
GRMZM2G092391
    Variation: February 15th, 2007
Gene Model: February 15th, 2019
5 days agorgh*-N802 roughN802: speckled kernel; floury pitted etched rough surface
3.05 - 3.09
   Neuffer, MG and England, DJ. 1995. MNL 69:43-46     Reference: September 1st, 2003
Variation: February 14th, 2019
5 days agoagal1 alpha-galactosidase1: Entrez Gene relates to alpha-galactosidase 1 (AGAL) of Arabidopsis
1.07
GRMZM2G095126
Beaumont, VH et al. 1996. Theor Appl Genet 93:606-612     Reference: September 1st, 2003
Gene Product: September 1st, 2003
Variation: February 14th, 2019
Gene Model: April 19th, 2016
5 days agoIDP1437a  : similar to protein PIR of A. thaliana (1S site)similar to small subunit ribosomal protein S19 of A. thaliana (1L site)
1.01
GRMZM2G170567
    Variation: March 31st, 2005
Gene Model: February 14th, 2019
5 days agoIDP1468  : similar to RNA polymerase Rpb6 of A. thaliana
1.08
GRMZM2G013600
    Variation: March 31st, 2005
Gene Model: February 14th, 2019
5 days agoIDP156  :
1.06
GRMZM2G056122
    Variation: March 31st, 2005
Gene Model: February 14th, 2019
5 days agoIDP174  :
1.07
GRMZM5G877884
    Variation: March 31st, 2005
Gene Model: February 14th, 2019
5 days agoIDP190  :
1.08
GRMZM2G144782
    Variation: May 12th, 2006
Gene Model: February 14th, 2019
5 days agomagi32402  :
1.07
GRMZM2G057608
    Variation: March 31st, 2005
Gene Model: February 14th, 2019
5 days agoIDP1982  :
1.07
GRMZM5G832380
    Variation: March 31st, 2005
Gene Model: February 14th, 2019
5 days agoIDP243  :
1.07
GRMZM2G152552
    Variation: March 31st, 2005
Gene Model: February 14th, 2019
5 days agoIDP2492  :
1.07
GRMZM2G135866
    Variation: March 31st, 2005
Gene Model: February 14th, 2019
5 days agoIDP295  : similar to chitin elicitor receptor kinase 1 of A. thaliana
1.06
GRMZM2G317770
    Variation: March 31st, 2005
Gene Model: February 14th, 2019
5 days agoIDP512  :
1.08
GRMZM2G124434
    Variation: March 31st, 2005
Gene Model: February 14th, 2019
5 days agoIDP640  : similar to methionine aminopeptidase 1A of A. thaliana
1.07
GRMZM2G113062
    Variation: March 31st, 2005
Gene Model: February 14th, 2019
5 days agoIDP641  : similar to UDP-glucosyl transferase 85A2 of A. thaliana
1.07
GRMZM2G373124
    Variation: March 31st, 2005
Gene Model: February 14th, 2019
5 days agoIDP644  :
1.07
GRMZM2G025855
    Variation: March 31st, 2005
Gene Model: February 14th, 2019
5 days agoIDP669  :
1.08
GRMZM2G064605
    Variation: March 31st, 2005
Gene Model: February 14th, 2019
5 days agoIDP707  :
1.08
GRMZM2G164018
    Variation: March 31st, 2005
Gene Model: February 14th, 2019
5 days agoIDP716  : similar to thioredoxin family protein of A. thaliana
1.07
GRMZM5G882446
    Variation: March 31st, 2005
Gene Model: February 14th, 2019
5 days agoIDP790  :
1.06
GRMZM2G068657
    Variation: March 31st, 2005
Gene Model: February 14th, 2019
5 days agoIDP820  :
1.07
GRMZM2G153208
    Variation: March 31st, 2005
Gene Model: February 14th, 2019
5 days agoIDP856  :
1.07
AC217910.3_FG004
    Variation: March 31st, 2005
Gene Model: February 14th, 2019
6 days agosro2 similar to RCD one2:
 
GRMZM5G866843
Jiang, HH et al. 2018. Acta Physiol Plant 40:176     Reference: September 7th, 2018
Gene Product: September 7th, 2018
Variation: February 13th, 2019
Gene Model: August 10th, 2018
6 days agoIDP1407  :
1.05
GRMZM2G114356
    Variation: March 31st, 2005
Gene Model: February 13th, 2019
6 days agomagi23951  :
1.04
GRMZM2G330650
    Variation: September 25th, 2007
Gene Model: February 13th, 2019
6 days agoIDP1473  :
1.04
GRMZM2G074138
    Variation: March 31st, 2005
Gene Model: February 13th, 2019
6 days agoIDP1675  :
1.05
GRMZM2G424181
    Variation: March 31st, 2005
Gene Model: February 13th, 2019
6 days agoIDP182  :
1.04
GRMZM2G115975
    Variation: March 31st, 2005
Gene Model: February 13th, 2019
6 days agoIDP194  :
1.05
GRMZM2G034372
    Variation: March 31st, 2005
Gene Model: February 13th, 2019
6 days agoIDP1953  :
1.04
GRMZM2G074946
    Variation: March 31st, 2005
Gene Model: February 13th, 2019
6 days agoIDP1986  :
1.04
GRMZM2G028302
    Variation: March 31st, 2005
Gene Model: February 13th, 2019
6 days agoIDP2367  :
1.05
GRMZM5G868757
    Variation: March 31st, 2005
Gene Model: February 13th, 2019
6 days agoIDP2553  :
1.04
GRMZM2G107473
    Variation: March 31st, 2005
Gene Model: February 13th, 2019
6 days agoIDP34  :
1.05
GRMZM2G167728
    Variation: March 31st, 2005
Gene Model: February 13th, 2019
6 days agoIDP511  :
1.04
GRMZM5G862467
    Variation: March 31st, 2005
Gene Model: February 13th, 2019
6 days agoIDP739  :
1.04
GRMZM2G009232
    Variation: March 31st, 2005
Gene Model: February 13th, 2019
6 days agoIDP741  : similar to Lactoylglutathione lyase / glyoxalase I family protein of A. thaliana
1.06
GRMZM2G067028
    Variation: March 31st, 2005
Gene Model: February 13th, 2019
6 days agoIDP751  :
1.05
GRMZM2G033478
    Variation: March 31st, 2005
Gene Model: February 13th, 2019
6 days agoIDP752  : similar to putative protein phosphatase 2C 6 of A. thaliana
1.06
GRMZM2G170299
    Variation: March 31st, 2005
Gene Model: February 13th, 2019
6 days agoIDP839  :
1.04
GRMZM2G039880
    Variation: March 31st, 2005
Gene Model: February 13th, 2019
6 days agoIDP875  :
1.03
GRMZM5G851485
    Variation: March 31st, 2005
Gene Model: February 13th, 2019
6 days agomagi107220  :
1.04
GRMZM2G172244
    Variation: March 31st, 2005
Gene Model: February 13th, 2019
7 days agoo2 opaque endosperm2: like o1; high lysine content; regulates b-32 protein (see rip1); reduced lysine degradation (lysine-ketoglutaric reductase); SSRs phi057, 112
7.01
   Jia, SG et al. 2019. pp.doi: 10.1016/j.gpb.2018.02.003     Reference: February 12th, 2019
Gene Product: September 1st, 2003
Variation: June 6th, 2016
7 days agopdi9 protein disulfide isomerase9:
1.03
GRMZM2G073628
Jia, SG et al. 2019. pp.doi: 10.1016/j.gpb.2018.02.003     Reference: February 12th, 2019
Gene Product: September 1st, 2003
Variation: December 23rd, 2015
Gene Model: December 18th, 2015
7 days agoAY106592  : similar to protein sodium-and lithium-tolerant 1 of A. thaliana
1.03
GRMZM2G048482
    Variation: February 12th, 2019
Gene Model: February 12th, 2019
7 days agoAY110240  :
1.03
GRMZM2G013957
    Variation: July 29th, 2004
Gene Model: February 12th, 2019
7 days agoIDP112  :
1.03
GRMZM2G319781
    Variation: March 31st, 2005
Gene Model: February 12th, 2019
7 days agolimtf1 LIM-transcription factor 1: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
1.03
GRMZM2G128206
Yilmaz, A et al. 2009. Plant Physiol 149:171-180     Reference: May 12th, 2011
Variation: March 31st, 2005
Gene Model: February 12th, 2019
7 days agoIDP180  :
1.03
GRMZM2G341309
    Variation: March 31st, 2005
Gene Model: February 12th, 2019
7 days agoIDP329  :
1.03
GRMZM2G049190
    Variation: March 31st, 2005
Gene Model: February 12th, 2019
7 days agoIDP643  : similar to gamma-interferon-inducible lysosomal thiol reductase family protein of A. thaliana
1.03
GRMZM2G307992
    Variation: March 31st, 2005
Gene Model: February 12th, 2019
7 days agoIDP701  :
1.03
GRMZM2G048703
    Variation: March 31st, 2005
Gene Model: February 12th, 2019
7 days agoIDP92  :
1.03
GRMZM2G049041
    Variation: March 31st, 2005
Gene Model: February 12th, 2019
8 days agotrps2 trehalose-6-phosphate synthase2:
1.03
GRMZM2G099860
Zhou, ML et al. 2014. J Plant Growth Reg 33:256-271     Reference: June 26th, 2014
Gene Product: September 15th, 2013
Gene Model: February 11th, 2019
8 days agolw2 lemon white2: like lw1
5.05
GRMZM2G137409
Zhang, LL et al. 2019. Plant Physiol pp.doi: 10.1104/pp.18.01148     Reference: February 8th, 2019
Gene Product: February 8th, 2019
Variation: February 11th, 2019
Gene Model: February 8th, 2019
8 days agooy1 oil yellow1: seedling oily greenish-yellow; viable; fails to convert protoporphyrin IX to Mg-protoporphyrin; oy1-t tinged green; oy1-1039, oy1-1040 lethal; Oy1-700 dominant yellow-green; gene product confirmed by transgenic expression and genetic mapping.
10.02
   Khangura, RS et al. 2019. G3 9:375-390     Reference: February 11th, 2019
Gene Product: June 8th, 2007
Variation: March 17th, 2011
8 days agobnlg1429  :
1.02
       Variation: February 11th, 2019
8 days agoIDP1425  :
1.02
GRMZM2G136081
    Variation: March 31st, 2005
Gene Model: February 11th, 2019
8 days agoIDP2385  :
1.03
GRMZM2G012501
    Variation: March 31st, 2005
Gene Model: February 11th, 2019
8 days agomagi2762  :
1.02
GRMZM2G172410
    Variation: March 31st, 2005
Gene Model: February 11th, 2019
8 days agoIDP29  :
1.02
GRMZM2G080586
    Variation: March 31st, 2005
Gene Model: February 11th, 2019
8 days agoIDP343  : similar to vacuolar protein-sorting-associated protein 37-1 of A. thaliana
1.02
GRMZM2G023575
    Variation: March 31st, 2005
Gene Model: February 11th, 2019
8 days agoIDP622  :
1.02
GRMZM2G009326
    Variation: March 12th, 2007
Gene Model: February 11th, 2019
8 days agoIDP810  :
1.02
GRMZM2G164965
    Variation: March 31st, 2005
Gene Model: February 11th, 2019
8 days agoIDP847  :
1.01
GRMZM2G038485
    Variation: March 31st, 2005
Gene Model: February 11th, 2019
8 days agoIDP871  : similar to RAB GTPase H1E of A. thaliana
1.02
AC166636.1_FG008
    Variation: March 31st, 2005
Gene Model: February 11th, 2019
9 days agoIDP1464  :
1.01
GRMZM2G013634
    Variation: March 31st, 2005
Gene Model: February 10th, 2019
9 days agoIDP2420  :
1.01
GRMZM2G176820
    Variation: March 31st, 2005
Gene Model: February 10th, 2019
9 days agoIDP553  :
1.01
GRMZM2G176397
    Variation: March 31st, 2005
Gene Model: February 10th, 2019
9 days agoIDP658  :
1.02
GRMZM2G070259
    Variation: May 13th, 2006
Gene Model: February 10th, 2019
9 days agoIDP755  : similar to D111/G-patch domain-containing protein of A. thaliana
1.01
GRMZM2G089976
    Variation: March 31st, 2005
Gene Model: February 10th, 2019
10 days agopx14 peroxidase14:
2.03
GRMZM2G108219
Jin, B et al. 2019. PLoS One 14:e0211941     Reference: February 9th, 2019
Gene Product: September 18th, 2015
Variation: February 22nd, 2015
Gene Model: February 23rd, 2015
11 days agopza01089  : candidate modifier of Ga1-s expression (Hurst et al. 2019)
10.04
   Hurst, P et al. 2019. bioRxiv preprint pp.doi: 10.1101/543264     Reference: February 8th, 2019
Variation: January 26th, 2019
11 days agoga1 gametophyte factor1: (was ga9) Ga1 pollen grains are competitively superior to ga1 on Ga1 silks; Ga1-S (strong) super-gametophyte
4.02 - 4.03
   Hurst, P et al. 2019. bioRxiv preprint pp.doi: 10.1101/543264     Reference: February 8th, 2019
Variation: June 22nd, 2005
11 days agoumc1454  : candidate modifier of Ga1-s expression (Hurst et al. 2019)
2.04
AC235541.1_FG002
Hurst, P et al. 2019. bioRxiv preprint pp.doi: 10.1101/543264     Reference: February 8th, 2019
Variation: September 1st, 2003
Gene Model: February 21st, 2018
11 days agode18 defective18: Defective kernel: seed weight less than half of normal (B37) (Torti et al. 1984)
10.03
GRMZM2G091819
Bernardi, J et al. 2019. Plant Sci pp.doi; 10.1016/j.plantsci.2019.01.027     Reference: February 8th, 2019
Gene Product: June 18th, 2018
Variation: January 21st, 2016
Gene Model: September 11th, 2012
12 days agosid1 sister of indeterminate spikelet1: inflorescence architecture, apparent target of tasselseed4 microRNA (Chuck et al 2008),
 
GRMZM2G176175
Stephenson, E et al. 2019. PLoS One 14:e0203728     Reference: February 7th, 2019
Gene Product: February 27th, 2017
Variation: October 17th, 2014
Gene Model: October 16th, 2014
Recommended by Lisa Harper:
September 2nd, 2008
12 days agospi1 sparse inflorescence1: mutant tassels have fewer branches and spikelets, and its ears are small, with fewer kernels
3.08
GRMZM2G025222
Stephenson, E et al. 2019. PLoS One 14:e0203728     Reference: February 7th, 2019
Gene Product: June 18th, 2018
Variation: June 24th, 2011
Gene Model: April 24th, 2013
Recommended by Lisa Harper:
October 7th, 2008
12 days agots6 tasselseed6: Recessive alleles have more than two florets per spikelet, and reversed germ orientation. Dominant Ts6 tassels are compact, pistillate to mixed and ears have irregular kernel placement.
1.11
GRMZM5G862109
Stephenson, E et al. 2019. PLoS One 14:e0203728     Reference: February 7th, 2019
Gene Product: February 27th, 2017
Variation: December 4th, 2013
Gene Model: July 14th, 2011
Recommended by George Chuck:
September 25th, 2007
12 days agorap2 rap2.7 orthologue: negative regulator of flowering time; vgt1 acts as an enhancer (Salvi et al. 2007)
8.06
GRMZM2G700665
Stephenson, E et al. 2019. PLoS One 14:e0203728     Reference: February 7th, 2019
Gene Product: February 27th, 2017
Gene Model: November 20th, 2012
12 days agopebp1 phosphatidylethanolamine-binding protein1:
 
   Stephenson, E et al. 2019. PLoS One 14:e0203728     Reference: February 7th, 2019
Variation: November 17th, 2010
12 days agopebp2 phosphatidylethanolamine-binding protein2:
 
   Stephenson, E et al. 2019. PLoS One 14:e0203728     Reference: February 7th, 2019
Variation: December 15th, 2010
12 days agopebp3 phosphatidylethanolamine-binding protein3:
 
   Stephenson, E et al. 2019. PLoS One 14:e0203728     Reference: February 7th, 2019
Variation: December 15th, 2010
12 days agopebp7 phosphatidylethanolamine-binding protein7:
 
   Stephenson, E et al. 2019. PLoS One 14:e0203728     Reference: February 7th, 2019
Variation: June 19th, 2015
12 days agopebp8 phosphatidylethanolamine-binding protein8: florigen activity: complements Arabidopsis FT mutants, promoting flowering at short days. Requires functional id1 gene.(Lazakis et al 2011)
 
GRMZM2G179264
Stephenson, E et al. 2019. PLoS One 14:e0203728     Reference: February 7th, 2019
Gene Product: May 6th, 2011
Variation: June 19th, 2015
Gene Model: May 6th, 2011
12 days agopebp12 phosphatidylethanolamine-binding protein12:
 
   Stephenson, E et al. 2019. PLoS One 14:e0203728     Reference: February 7th, 2019
Variation: December 10th, 2010
12 days agopebp14 phosphatidylethanolamine-binding protein:
 
   Stephenson, E et al. 2019. PLoS One 14:e0203728     Reference: February 7th, 2019
Variation: December 15th, 2010
12 days agopebp15 phosphatidylethanolamine-binding protein15:
 
   Stephenson, E et al. 2019. PLoS One 14:e0203728     Reference: February 7th, 2019
Variation: December 15th, 2010
12 days agopebp18 phosphatidylethanolamine-binding protein18:
 
   Stephenson, E et al. 2019. PLoS One 14:e0203728     Reference: February 7th, 2019
Variation: December 13th, 2010
12 days agopebp26 phosphatidylethanolamine-binding protein26:
 
GRMZM2G400167
Stephenson, E et al. 2019. PLoS One 14:e0203728     Reference: February 7th, 2019
Variation: December 14th, 2010
Gene Model: July 28th, 2016
12 days agogi1 gigantea1: homologous to Arabidopsis photoperiod gene gigantea
8.03
GRMZM2G107101
Stephenson, E et al. 2019. PLoS One 14:e0203728     Reference: February 7th, 2019
Gene Product: September 19th, 2012
Variation: April 23rd, 2013
Gene Model: September 18th, 2012
12 days agogi2 gigantea2: homologous to Arabidopsis photoperiod gene gigantea.
3.03
GRMZM5G844173
Stephenson, E et al. 2019. PLoS One 14:e0203728     Reference: February 7th, 2019
Gene Product: September 19th, 2012
Variation: September 18th, 2012
Gene Model: September 18th, 2012
12 days agoba1 barren stalk1: ear shoots and most tassel branches and spikelets absent
3.06
   Stephenson, E et al. 2019. PLoS One 14:e0203728     Reference: February 7th, 2019
Gene Product: July 19th, 2012
Variation: March 18th, 2015
12 days agobd1 branched silkless1: ear silkless with indeterminate branches at base; tassel proliferated, bushy
7.05
GRMZM2G307119
Stephenson, E et al. 2019. PLoS One 14:e0203728   At5g18560 (TAIR)
LOC_Os01g21820 (MSU/TIGR)
Os07g0669500 (Gramene)
Reference: February 7th, 2019
Gene Product: July 27th, 2009
Variation: August 13th, 2011
Gene Model: July 14th, 2011
12 days agobif1 barren inflorescence1: dominant Bif1 plants have ear and tassel with many fewer spikelets, bare rachis appendages
8.03 - 8.03
GRMZM2G130953
Stephenson, E et al. 2019. PLoS One 14:e0203728     Reference: February 7th, 2019
Gene Product: October 16th, 2015
Variation: October 16th, 2015
Gene Model: October 16th, 2015
12 days agoct2 compact plant2: semi-dwarf plant, 1/3 height; shortened internodes; club tassel, fasciated ear
1.01 - 1.02
GRMZM2G064732
Je, BI, et al. 2018. Elife. 7:doi: 10.7554/eLife.35673.001     Reference: February 7th, 2019
Gene Product: September 16th, 2013
Variation: September 20th, 2013
Gene Model: September 16th, 2013
12 days agogl15 glossy15: glossy leaf surface expressed after 3rd leaf (aka gl4)
9.03
   Stephenson, E et al. 2019. PLoS One 14:e0203728     Reference: February 7th, 2019
Variation: October 5th, 2012
12 days agora1 ramosa1: ear and tassel many-branched; tassel branches taper to tip
7.02
   Stephenson, E et al. 2019. PLoS One 14:e0203728     Reference: February 7th, 2019
Gene Product: April 11th, 2007
Variation: August 20th, 2010
12 days agora2 ramosa2: tassel many-branched, upright, not conical like ra1; irregular kernel placement
3.03 - 3.03
AC233943.1_FG002
Stephenson, E et al. 2019. PLoS One 14:e0203728   AT5G63090 (TAIR)
LOC_Os01g07480 (MSU/TIGR)
Os01g0169400 (Gramene)
Reference: February 7th, 2019
Gene Product: July 27th, 2009
Variation: September 19th, 2009
Gene Model: July 14th, 2011
12 days agora3 ramosa3: branched inflorescence; mutant ears have abnormal long branches at their bases; trehalose biosynthesis
7.06
   Stephenson, E et al. 2019. PLoS One 14:e0203728     Reference: February 7th, 2019
Gene Product: September 15th, 2013
Variation: December 3rd, 2010
12 days agorel2 ramosa1 enhancer locus2: rel2 mutants dramatically increase the formation of long branches in ears of both ra1 and ra2 mutants
10.03
   Stephenson, E et al. 2019. PLoS One 14:e0203728     Reference: February 7th, 2019
Gene Product: October 23rd, 2018
Variation: October 23rd, 2018
12 days agotsh4 tassel sheath4: tsh4 mutant tassels have one to five long tassel branches, instead of ~13 observed in non-mutant W22. In place of tassel branches, long bract leaves were present, clustered at the base of the tassel.
7.03
GRMZM2G307588
Stephenson, E et al. 2019. PLoS One 14:e0203728     Reference: February 7th, 2019
Gene Product: December 18th, 2014
Variation: October 8th, 2011
Gene Model: October 6th, 2011
12 days agocct1 CO CO-LIKE TIMING OF CAB1 protein domain1: photoperiod response locus; confers later flowering in teosintes under longer day lengths; many maize inbred lines, including some adapted to tropical regions, have cct1 alleles insensitive to photoperiod (Hung et al 2012)
 
GRMZM2G381691
Stephenson, E et al. 2019. PLoS One 14:e0203728   AT5G24930 (TAIR)
LOC_Os07g15770 (MSU/TIGR)
Os07g0261200 (Gramene)
Reference: February 7th, 2019
Gene Product: June 18th, 2018
Variation: December 27th, 2017
Gene Model: July 17th, 2012
12 days agobif4 barren inflorescence4: like Bif1; dominant plants have ear and tassel with many fewer spikelets, bare rachis appendage
 
   Stephenson, E et al. 2019. PLoS One 14:e0203728     Reference: February 7th, 2019
Gene Product: October 16th, 2015
Variation: October 16th, 2015
12 days agohb48 Homeobox-transcription factor 48: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Tsuda, K, et al. 2017. Plant Cell. 0:doi: 10.1105/tpc.16.00967     Reference: February 7th, 2019
Variation: April 7th, 2017
12 days agohb76 Homeobox-transcription factor 76: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Tsuda, K, et al. 2017. Plant Cell. 0:doi: 10.1105/tpc.16.00967     Reference: February 7th, 2019
Variation: April 7th, 2017
12 days agosbp23 SBP-transcription factor 23: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Stephenson, E et al. 2019. PLoS One 14:e0203728     Reference: February 7th, 2019
Gene Product: December 18th, 2014
12 days agoub3 unbranched3: double mutant shows decrease in tassel branch number
 
   Stephenson, E et al. 2019. PLoS One 14:e0203728     Reference: February 7th, 2019
Gene Product: December 18th, 2014
Variation: December 17th, 2014
12 days agoub2 unbranched2: double mutant shows decrease in tassel branch number
 
   Stephenson, E et al. 2019. PLoS One 14:e0203728     Reference: February 7th, 2019
Gene Product: December 18th, 2014
Variation: December 17th, 2014
12 days agotcptf15 TCP-transcription factor 15: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Stephenson, E et al. 2019. PLoS One 14:e0203728     Reference: February 7th, 2019
Gene Product: November 2nd, 2014
12 days agotga1 teosinte glume architecture1: glumes indurated, erect, long, boat-shaped; factor transferred from teosinte
4.05
GRMZM2G101511
Stephenson, E et al. 2019. PLoS One 14:e0203728     Reference: February 7th, 2019
Gene Product: December 18th, 2014
Variation: May 7th, 2015
Gene Model: October 28th, 2011
12 days agofea2 fasciated ear2: ear fasciated, broadened and flattened at the tip; rows irregular; similar to CLAVATA 2 of Arabidopsis thaliana
4.05
   Je, BI, et al. 2018. Elife. 7:doi: 10.7554/eLife.35673.001     Reference: February 7th, 2019
Gene Product: December 20th, 2004
Variation: February 11th, 2013
12 days agozmm15 Zea mays MADS-box 15:
5.01
GRMZM2G553379
Stephenson, E et al. 2019. PLoS One 14:e0203728     Reference: February 7th, 2019
Variation: June 15th, 2018
Gene Model: June 15th, 2018
12 days agozfl1 zea floricaula/leafy1: zfl1 and zfl2 double mutants exhibit a disruption of floral organ identity and patterning, as well as defects in inflorescence architecture and in the vegetative to reproductive phase transition.
10.06
   Stephenson, E et al. 2019. PLoS One 14:e0203728     Reference: February 7th, 2019
Variation: February 20th, 2007
12 days agozap1 zea apetala homolog1:
2.10
   Stephenson, E et al. 2019. PLoS One 14:e0203728     Reference: February 7th, 2019
Variation: February 2nd, 2011
12 days agozmm31 Zea mays MADS31:
5.01
GRMZM2G071620
Stephenson, E et al. 2019. PLoS One 14:e0203728     Reference: February 7th, 2019
Variation: August 7th, 2008
Gene Model: July 2nd, 2014
12 days agodlf1 delayed flowering1: tall late plant with additional nodes and leaves at flowering; no apparent response to day length
 
   Stephenson, E et al. 2019. PLoS One 14:e0203728     Reference: February 7th, 2019
Gene Product: August 21st, 2018
Variation: February 6th, 2011
12 days agomads1 MADS1: transcripts detected in egg cells and invivo zygotes of maize, also expressed in synergids and antipodal cells. during flower development expressed in all ear spikelet organ primordia at intermediate stages
9.07
   Stephenson, E et al. 2019. PLoS One 14:e0203728     Reference: February 7th, 2019
Gene Product: September 1st, 2003
Variation: April 15th, 2008
12 days agospt*-N1620B spottedN1620B:
4.03 - 4.05
   Neuffer, MG. 1995. Personal communication-mutant collection     Reference: September 1st, 2003
Variation: February 7th, 2019
12 days agozmm24 Zea mays MADS24:
1.10
GRMZM2G087095
Stephenson, E et al. 2019. PLoS One 14:e0203728     Reference: February 7th, 2019
Variation: February 2nd, 2011
Gene Model: July 2nd, 2014
12 days agovt2 vanishing tassel2: inflorescence development; TRP-depenedent auxin synthesis
 
GRMZM2G127308
Stephenson, E et al. 2019. PLoS One 14:e0203728   AT1G70560 (TAIR) Reference: February 7th, 2019
Gene Product: April 30th, 2011
Variation: June 24th, 2011
Gene Model: May 2nd, 2012
12 days agofcp1 fon2-like cle protein1: mutants have a fasciated ear phenotype
 
GRMZM2G165836
Je, BI, et al. 2018. Elife. 7:doi: 10.7554/eLife.35673.001   LOC_Os04g39770 (MSU/TIGR)
Os04g0473800 (Gramene)
Reference: February 7th, 2019
Gene Product: May 21st, 2016
Variation: May 22nd, 2016
Gene Model: May 21st, 2016
12 days agocrn1 coryne1: involved in shoot apical meristem (SAM) development; functions downstream of fea2; mutants develop fasciated ears
 
GRMZM2G032132
Je, BI, et al. 2018. Elife. 7:doi: 10.7554/eLife.35673.001   AT5G13290 (TAIR) Reference: February 7th, 2019
Gene Product: January 24th, 2013
Gene Model: May 21st, 2018
12 days agosbp29 SBP-transcription factor 29: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
7.03
GRMZM2G067624
Stephenson, E et al. 2019. PLoS One 14:e0203728     Reference: February 7th, 2019
Gene Product: December 18th, 2014
Gene Model: July 11th, 2018
12 days agopin1 PIN-formed protein1: gene product cross-reacts with anti-AtPIN1 antibody and in tassel and ear, the PIN proteins are localized to a group of cells in subepidermal meristematic layers.
9.01
GRMZM2G098643
Stephenson, E et al. 2019. PLoS One 14:e0203728     Reference: February 7th, 2019
Gene Product: April 21st, 2014
Variation: January 20th, 2015
Gene Model: January 24th, 2013
12 days agogif1 growth-regulating-factor-interacting factor1: mutants are semi-dwarf with narrow leaves and fasciated inflorescence meristems
1.10
GRMZM2G180246
Zhang, D, et al. 2018. Plant Cell. 0:doi: 10.1105/tpc.17.00791   AT5G28640 (TAIR)
LOC_Os03g52320 (MSU/TIGR)
Reference: February 7th, 2019
Gene Product: July 6th, 2015
Variation: February 6th, 2018
Gene Model: July 6th, 2015
12 days agoconz1 constans1: homologous to photoperiod genes constans (co) from Arabiodopsis and heading date 1 (hd1) in rice. (Miller 2008)
9.03
   Stephenson, E et al. 2019. PLoS One 14:e0203728     Reference: February 7th, 2019
Gene Product: June 18th, 2018
Variation: July 28th, 2008
13 days agocsu904  :
7.04
GRMZM2G102786
    Variation: September 1st, 2003
Gene Model: February 6th, 2019
13 days agoIDP1466  :
7.06
GRMZM2G133819
    Variation: March 31st, 2005
Gene Model: February 6th, 2019
13 days agoIDP1611  :
7.05
GRMZM2G427937
    Variation: March 31st, 2005
Gene Model: February 6th, 2019
13 days agoIDP1673  :
7.05
GRMZM2G148249
    Variation: March 31st, 2005
Gene Model: February 6th, 2019
13 days agoIDP2594  :
7.04
GRMZM2G382106
    Variation: March 31st, 2005
Gene Model: February 6th, 2019
13 days agoIDP705  : similar to ATP synthase mitochondrial F1 complex assembly factor 2 of A. thaliana
7.05
GRMZM2G003172
    Variation: March 31st, 2005
Gene Model: February 6th, 2019
13 days agoIDP744  :
7.05
GRMZM2G130398
    Variation: March 31st, 2005
Gene Model: February 6th, 2019
14 days agocsu5a  : Was thp1, leaf cDNA csu5 reported similar to Vigna mungo sulfhydryl-endopeptidase; single copy. Not in Entrez neighbors May 1998. similar to cysteine proteinase-like protein of A. thaliana
7.04
GRMZM2G036203
Rixmann, C et al. 1992. in Heller, SR et al. 1992. Abstracts, Plant Genome I, San Diego, CA     Reference: September 1st, 2003
Variation: September 1st, 2003
Gene Model: February 5th, 2019
14 days agoumc1333  : similar to formin-like protein 2 of A. thaliana
7.03
GRMZM2G132486
    Variation: February 5th, 2019
Gene Model: February 5th, 2019
14 days agocdpk11 calcium dependent protein kinase11: encodes a protein that functions in abscisic acid signaling upstream of the MAP kinase encoded by mpk2, aka MPK5 (Ding et al 2012)
 
GRMZM2G047486
Borkiewicz, L et al. 2019. Physiol Plant pp.doi: 10.1111/ppl.12938     Reference: February 5th, 2019
Gene Product: July 9th, 2013
Variation: April 3rd, 2015
Gene Model: July 9th, 2013
14 days agoIDP1704  :
7.03
GRMZM2G052336
    Variation: March 31st, 2005
Gene Model: February 5th, 2019
14 days agoIDP1981  :
7.04
GRMZM2G072054
    Variation: March 31st, 2005
Gene Model: February 5th, 2019
14 days agoIDP2483  :
7.03
GRMZM2G148864
    Variation: March 31st, 2005
Gene Model: February 5th, 2019
14 days agoIDP2590  :
7.04
GRMZM5G886969
    Variation: March 31st, 2005
Gene Model: February 5th, 2019
14 days agoIDP727  : similar to xyloglucan:xyloglucosyl transferase of A. thaliana
7.03
GRMZM2G413044
    Variation: March 31st, 2005
Gene Model: February 5th, 2019
14 days agoIDP789  :
7.03
GRMZM2G071015
    Variation: March 31st, 2005
Gene Model: February 5th, 2019
14 days agoIDP865  :
7.03
GRMZM2G085670
    Variation: March 31st, 2005
Gene Model: February 5th, 2019
15 days agomagi99589  :
7.03
GRMZM5G870752
    Variation: March 31st, 2005
Gene Model: February 4th, 2019
15 days agoIDP96  :
7.03
GRMZM2G161302
    Variation: March 31st, 2005
Gene Model: February 4th, 2019
18 days agodek15 defective kernel15: collapsed floury endosperm; lethal; cultured embryos green
10.04 - 10.07
GRMZM2G079796
He, YH et al. 2019. Plant Cell pp.doi; 10.1105/tpc.18.00921     Reference: February 1st, 2019
Gene Product: February 1st, 2019
Variation: February 1st, 2019
Gene Model: February 1st, 2019
18 days agoereb53 AP2-EREBP-transcription factor 53: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Anand, A et al. 2019. Plant Biotechnol J pp.doi: 10.1111/pbi.13089   LOC_Os1g67410 (MSU/TIGR) Reference: February 1st, 2019
Gene Product: February 27th, 2017
18 days agohb122 Homeobox-transcription factor 122: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Anand, A et al. 2019. Plant Biotechnol J pp.doi: 10.1111/pbi.13089     Reference: February 1st, 2019
Gene Product: August 25th, 2017
19 days agotlk2 tousled-like protein kinase2:
5.01
   Mazaheri, M et al. 2019. BMC Plant Biology 19:45     Reference: January 31st, 2019
Gene Product: February 15th, 2008
Variation: June 25th, 2015
19 days agoesp1 embryo specific protein1: late embryonic protein, induced by abscisic acid and osmotic stress; cDNA similar to other LEA proteinsortholog of wheat Em; protein and mRNA in embryo from 16 days after pollination
6.05
AC233879.1_FG002
Williams, BA and Tsang, A. 1991. Plant Mol Biol 16:919-923     Reference: September 1st, 2003
Gene Product: January 31st, 2019
Variation: September 1st, 2003
Gene Model: July 27th, 2016
19 days agobnlg1057  :
1.06
   Mazaheri, M et al. 2019. BMC Plant Biology 19:45     Reference: January 31st, 2019
Variation: September 1st, 2003
19 days agomads69 MADS-transcription factor 69: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.contributes to natural variation in flowering time in maize
 
   Mazaheri, M et al. 2019. BMC Plant Biology 19:45     Reference: January 31st, 2019
Variation: October 5th, 2018
19 days agolhy1 late hypocotyl elongation protein ortholog1: myb transcription factor - core clock gene (Hayes et al. 2010)
10.03
GRMZM2G175265
Tian, L et al. 2019. PLoS One 14:e0211623     Reference: January 31st, 2019
Gene Product: July 31st, 2016
Variation: December 28th, 2016
Gene Model: November 7th, 2018
19 days agomeg8 maternally expressed gene8:
 
GRMZM2G123153
Xiong, Y et al. 2014. BMC Plant Biology 14:204     Reference: August 29th, 2014
Variation: August 29th, 2014
Gene Model: January 31st, 2019
19 days agolhcb10 light harvesting chlorophyll a/b binding protein10: gene-specific cDNA probe; low expression in bundle sheath cells (aka cab1)unique genomic sequence; promoter is light regulated in tobacco and maize leaf mesophyll protoplasts (Knight et al. 1992)
 
GRMZM2G351977
Mazaheri, M et al. 2019. BMC Plant Biology 19:45     Reference: January 31st, 2019
Gene Product: September 1st, 2003
Gene Model: August 3rd, 2018
19 days agolea14 late embryogenesis abundant protein14: appears to be involved in drought tolerance
 
GRMZM2G050607
Bui, MM et al. 2019. Agronomy 9:62     Reference: January 31st, 2019
Gene Product: January 31st, 2019
Gene Model: January 31st, 2019
19 days agorop5 Rho-related protein from plants 5:
9.01
GRMZM2G102946
Mazaheri, M et al. 2019. BMC Plant Biology 19:45     Reference: January 31st, 2019
Gene Product: April 1st, 2004
Gene Model: January 1st, 2015
19 days agoAY109061  :
7.02
GRMZM2G095562
    Variation: September 25th, 2007
Gene Model: January 31st, 2019
19 days agoAY108844  :
7.04
GRMZM2G121022
    Variation: September 25th, 2007
Gene Model: January 31st, 2019
19 days agoIDP1643  :
7.02
GRMZM2G032944
    Variation: March 31st, 2005
Gene Model: January 31st, 2019
19 days agomagi14814  :
7.02
GRMZM2G160770
    Variation: March 31st, 2005
Gene Model: January 31st, 2019
19 days agoIDP353  :
7.02
GRMZM2G054120
    Variation: March 31st, 2005
Gene Model: January 31st, 2019
19 days agoIDP754  : similar to S-adenosylmethionine decarboxylase 1 beta chain of A. thaliana
7.02
GRMZM2G461159
    Variation: March 31st, 2005
Gene Model: January 31st, 2019
19 days agoIDP767  :
7.02
GRMZM2G053927
    Variation: March 31st, 2005
Gene Model: January 31st, 2019
19 days agoIDP84  :
7.02
GRMZM2G022014
    Variation: March 31st, 2005
Gene Model: January 31st, 2019
20 days agocybc7 cytochrome b-c1 complex subunit 7: encodes an important part of the mitochondrial electron transport chain that can suppress HR mediated by Rp1-D21 in a transient expression assay
 
GRMZM2G318346
He, YJ et al. 2019. Planta pp.doi: 10.1007/s00425-019-03092-8     Reference: January 30th, 2019
Gene Product: January 30th, 2019
Variation: January 30th, 2019
Gene Model: January 30th, 2019
20 days agoIDP1417  :
7.00
GRMZM2G019200
    Variation: March 31st, 2005
Gene Model: January 30th, 2019
20 days agoIDP1688  :
7.00
AC205122.4_FG003
    Variation: March 31st, 2005
Gene Model: January 30th, 2019
20 days agopspb2 photosystem II oxygen evolving polypeptide2: sequence highly similar to OEC23 oxygen evolving complex protein of photosystem II; located peripheral to lumenal side of thylakoid (Huang et al 2013)
7.01
GRMZM2G047954
Huang, M et al. 2013. J Proteome Res 12:491-504     Reference: August 5th, 2014
Gene Product: September 1st, 2003
Variation: March 31st, 2005
Gene Model: January 30th, 2019
20 days agoIDP336  : similar to ankyrin repeat and regulator of chromosome condensation (RCC1) domain-containing protein of A. thaliana
7.01
GRMZM2G443668
    Variation: March 31st, 2005
Gene Model: January 30th, 2019
20 days agoIDP497  :
7.01
GRMZM2G060866
    Variation: March 31st, 2005
Gene Model: January 30th, 2019
20 days agoIDP80  :
7.01
GRMZM2G012324
    Variation: March 31st, 2005
Gene Model: January 30th, 2019
22 days agoba2 barren stalk2: like ba1 except tassel is normal (original description from Emerson, Beadle and Fraser 1935)
2.04 - 2.05
GRMZM2G399641
Yao, H, et al. 2019. Molecular Plant. 0:doi: 10.1016/j.molp.2018.12.024     Reference: January 28th, 2019
Gene Product: January 26th, 2019
Variation: January 26th, 2019
Gene Model: January 26th, 2019
22 days agokwl1 kiwellin1: specifically blocks the catalytic activity of Ustilago maydis secreted fungal chorismate mutase Cmu1, by hindering substrate access to the active site
 
GRMZM2G073114
Han, XW, et al. 2019. Nature. 0:doi: 10.1038/s41586-018-0857-9     Reference: January 28th, 2019
Gene Product: January 22nd, 2019
Gene Model: January 21st, 2019
22 days agocmu3 chorismate mutase3:
 
GRMZM2G028369
Han, XW, et al. 2019. Nature. 0:doi: 10.1038/s41586-018-0857-9     Reference: January 28th, 2019
Gene Product: February 12th, 2014
Gene Model: January 21st, 2019
22 days agocmu2 chorismate mutase2: enzyme activity from protein raised in E coli
5.04
GRMZM2G179454
Han, XW, et al. 2019. Nature. 0:doi: 10.1038/s41586-018-0857-9     Reference: January 28th, 2019
Gene Product: February 12th, 2014
Gene Model: February 12th, 2014
25 days agoms30 male sterile30: like ms1
4.08
GRMZM2G174782
An, XL et al. 2019. Molecular Plant pp.doi: 10.1016/j.molp.2019.01.011     Reference: January 25th, 2019
Gene Product: January 25th, 2019
Variation: January 25th, 2019
Gene Model: January 25th, 2019
25 days agomagi104697  :
9.03
GRMZM2G074085
    Variation: March 31st, 2005
Gene Model: January 25th, 2019
26 days agotcb1 teosinte crossing barrier1: Barrier to crossing of maize onto Central Plateau teosinte - transferred to maize with linked positive modifiers, fails to accept any pollen, including Ga1-s
4.04
   Lu, Y et al. 2019. bioRxiv preprint pp.doi; 10.1101/529032     Reference: January 24th, 2019
Variation: January 24th, 2019
26 days agopme3 pectin methylesterase3: present and expressed only in Ga1-s genotypes; mutationally inactivated version present in Ga1-m
 
   Lu, Y et al. 2019. bioRxiv preprint pp.doi; 10.1101/529032     Reference: January 24th, 2019
Gene Product: September 10th, 2018
26 days agoIDP2364  :
9.02
GRMZM2G008326
    Variation: March 31st, 2005
Gene Model: January 24th, 2019
26 days agoIDP2406  :
9.03
GRMZM2G110993
    Variation: March 31st, 2005
Gene Model: January 24th, 2019
26 days agoIDP2554  :
9.07
GRMZM2G169384
    Variation: March 31st, 2005
Gene Model: January 24th, 2019
26 days agoIDP534  :
9.04
GRMZM2G124567
    Variation: March 31st, 2005
Gene Model: January 24th, 2019
26 days agoIDP809  :
9.04
GRMZM5G842855
    Variation: March 31st, 2005
Gene Model: January 24th, 2019
26 days agoIDP850  :
9.07
AC149475.2_FG002
    Variation: March 31st, 2005
Gene Model: January 24th, 2019
27 days agonta1 N-terminal amidase1: NCBI: CemA-like proton extrusion protein-related
9.08
GRMZM2G110236
Anderson, L, et al. 2004. Genetics. 166:1923-1933   At4g34090 (TAIR)
LOC_Os03g01920 (MSU/TIGR)
Reference: February 12th, 2011
Variation: April 21st, 2017
Gene Model: January 23rd, 2019
27 days agonagk1 N-acetylglutamate kinase1: catalyzes the second step of arginine biosynthesis
2.03
GRMZM2G132777
Liu, WJ et al. 2019. Frontiers Plant Sci pp.doi: 10.3389/fpls.2018.01902     Reference: January 23rd, 2019
Gene Product: January 23rd, 2019
Gene Model: January 23rd, 2019
27 days agoIDP1419  :
9.07
GRMZM2G060564
    Variation: March 31st, 2005
Gene Model: January 23rd, 2019
27 days agoumc2558  :
9.04
GRMZM2G020468
    Variation: January 22nd, 2019
Gene Model: January 23rd, 2019
28 days agoIDP2462  :
9.06
GRMZM2G138589
    Variation: March 31st, 2005
Gene Model: January 22nd, 2019
28 days agoIDP248  : similar to homogentisate 1,2-dioxygenase of A. thaliana
9.03
GRMZM2G154093
    Variation: March 31st, 2005
Gene Model: January 22nd, 2019
28 days agoIDP256  :
9.03
GRMZM2G112951
    Variation: March 31st, 2005
Gene Model: January 22nd, 2019
28 days agoIDP2570  :
9.02
GRMZM2G100873
    Variation: March 31st, 2005
Gene Model: January 22nd, 2019
28 days agoIDP300  :
9.04
GRMZM2G005869
    Variation: March 31st, 2005
Gene Model: January 22nd, 2019
28 days agoIDP310  :
9.04
GRMZM2G359070
    Variation: March 31st, 2005
Gene Model: January 22nd, 2019
28 days agoIDP375  :
9.03
GRMZM2G034015
    Variation: March 31st, 2005
Gene Model: January 22nd, 2019
28 days agoIDP65  : similar to 60S ribosomal protein L23 of A. thaliana
9.07
GRMZM2G171181
    Variation: March 31st, 2005
Gene Model: January 22nd, 2019
28 days agoIDP665  :
9.04
AC225193.3_FG003
    Variation: March 31st, 2005
Gene Model: January 22nd, 2019
28 days agoIDP694  : similar to B12D protein of A. thaliana
9.00
GRMZM2G027392
    Variation: March 31st, 2005
Gene Model: January 22nd, 2019
28 days agoIDP708  :
9.04
GRMZM2G152417
    Variation: March 31st, 2005
Gene Model: January 22nd, 2019
28 days agoIDP717  :
9.03
GRMZM2G097995
    Variation: March 31st, 2005
Gene Model: January 22nd, 2019
28 days agoIDP756  : similar to 40S ribosomal protein S15a-5 of A. thaliana
9.04
GRMZM2G007103
    Variation: September 25th, 2007
Gene Model: January 22nd, 2019
28 days agoIDP760  :
9.01
GRMZM2G152177
    Variation: March 31st, 2005
Gene Model: January 22nd, 2019
29 days agosun3 SUN domain protein3: plant-prevalent mid-SUN 3 transmembrane (PM3) type nuclear envelope protein
 
GRMZM2G120262
Gumber, HK et al. 2019. J Cell Sci pp.doi: 10.1242/jcs.221390     Reference: January 19th, 2019
Gene Model: January 21st, 2019
Recommended by Hank (Henry) Bass:
April 19th, 2011
31 days agosun1 SUN domain protein1: canonical C-terminal SUN-domain (CCSD) type nuclear envelope protein
 
GRMZM2G109818
Gumber, HK et al. 2019. J Cell Sci pp.doi: 10.1242/jcs.221390     Reference: January 19th, 2019
Variation: April 20th, 2011
Gene Model: April 20th, 2011
Recommended by Hank (Henry) Bass:
April 19th, 2011
31 days agosun2 SUN domain protein2:
 
GRMZM2G440614
Gumber, HK et al. 2019. J Cell Sci pp.doi: 10.1242/jcs.221390     Reference: January 19th, 2019
Variation: April 20th, 2011
Gene Model: April 20th, 2011
Recommended by Hank (Henry) Bass:
April 19th, 2011
31 days agosun4 SUN domain protein4:
 
   Gumber, HK et al. 2019. J Cell Sci pp.doi: 10.1242/jcs.221390     Reference: January 19th, 2019
Variation: April 20th, 2011
Recommended by Hank (Henry) Bass:
April 19th, 2011
31 days agosun5 SUN domain protein5: plant-prevalent mid-SUN 3 transmembrane (PM3) type nuclear envelope protein; may be pollen specific
 
AC194341.4_FG003
Gumber, HK et al. 2019. J Cell Sci pp.doi: 10.1242/jcs.221390     Reference: January 19th, 2019
Variation: April 20th, 2011
Gene Model: April 20th, 2011
Recommended by Hank (Henry) Bass:
April 19th, 2011
33 days agoben1 bentazon resistance1: recessive susceptibility to nicosulfuron (Accent) and mesotrione herbicidesDominant Ben1 resistant, with Ben2
5.01
GRMZM2G090432
Liu, XM et al. 2019. Theor Appl Genet pp.doi:10.1007/s00122-019-03282-8     Reference: January 17th, 2019
Gene Product: February 26th, 2018
Variation: February 12th, 2010
Gene Model: July 27th, 2016
35 days agohsp10 heat shock protein10: Sequence shows similarity to Arabidopsis HSP18.2
1.03
AC208204.3_FG006
Qian, YX et al. 2019. Gene pp.doi: 10.1016/j.gene.2018.12.062     Reference: January 14th, 2019
Gene Product: January 15th, 2019
Variation: August 8th, 2017
Gene Model: January 14th, 2019
35 days agohex1 hexokinase1: electrophoretic mobility; null allele is known; cytosolic; monomeric
3.02 - 3.03
GRMZM2G104081
Aguilera-Alvarado, GP et al. 2019. BMC Plant Biology 19:27     Reference: January 15th, 2019
Gene Product: September 15th, 2013
Variation: February 15th, 2010
Gene Model: September 15th, 2013
35 days agohex2 hexokinase2: electrophoretic mobility; null allele is known; cytosolic; monomeric
6.04 - 6.05
GRMZM2G432801
Aguilera-Alvarado, GP et al. 2019. BMC Plant Biology 19:27     Reference: January 15th, 2019
Gene Product: September 15th, 2013
Variation: February 15th, 2010
Gene Model: September 15th, 2013
35 days agohex3 hexokinase3:
8.05
GRMZM2G058745
Aguilera-Alvarado, GP et al. 2019. BMC Plant Biology 19:27     Reference: January 15th, 2019
Gene Product: September 15th, 2013
Variation: February 15th, 2010
Gene Model: September 15th, 2013
35 days agohex4 hexokinase4:
 
GRMZM2G068913
Aguilera-Alvarado, GP et al. 2019. BMC Plant Biology 19:27     Reference: January 15th, 2019
Gene Product: September 15th, 2013
Gene Model: September 15th, 2013
35 days agohex5 hexokinase5:
 
GRMZM5G856653
Aguilera-Alvarado, GP et al. 2019. BMC Plant Biology 19:27     Reference: January 15th, 2019
Gene Product: September 15th, 2013
Gene Model: September 15th, 2013
35 days agohex6 hexokinase6:
 
GRMZM2G171373
Aguilera-Alvarado, GP et al. 2019. BMC Plant Biology 19:27     Reference: January 15th, 2019
Gene Product: September 15th, 2013
Gene Model: September 15th, 2013
35 days agohex7 hexokinase7:
 
GRMZM2G051806
Aguilera-Alvarado, GP et al. 2019. BMC Plant Biology 19:27     Reference: January 15th, 2019
Gene Product: September 15th, 2013
Gene Model: September 15th, 2013
35 days agohex8 hexokinase8:
 
GRMZM2G046686
Aguilera-Alvarado, GP et al. 2019. BMC Plant Biology 19:27     Reference: January 15th, 2019
Gene Product: September 15th, 2013
Gene Model: September 15th, 2013
35 days agohex9 hexokinase9:
 
GRMZM2G467069
Aguilera-Alvarado, GP et al. 2019. BMC Plant Biology 19:27     Reference: January 15th, 2019
Gene Product: September 15th, 2013
Gene Model: September 15th, 2013
35 days agohsp22 heat shock protein22: mitochondrial protein
4.07
GRMZM2G007729
Qian, YX et al. 2019. Gene pp.doi: 10.1016/j.gene.2018.12.062     Reference: January 14th, 2019
Gene Product: January 15th, 2019
Gene Model: October 18th, 2013
35 days agohsp8 heat shock protein8:
 
GRMZM2G080724
Qian, YX et al. 2019. Gene pp.doi: 10.1016/j.gene.2018.12.062     Reference: January 14th, 2019
Gene Product: January 15th, 2019
Gene Model: January 14th, 2019
35 days agohsp9 heat shock protein9:
 
GRMZM2G046382
Qian, YX et al. 2019. Gene pp.doi: 10.1016/j.gene.2018.12.062     Reference: January 14th, 2019
Gene Product: January 15th, 2019
Gene Model: January 14th, 2019
35 days agohsp11 heat shock protein11:
 
GRMZM2G306679
Qian, YX et al. 2019. Gene pp.doi: 10.1016/j.gene.2018.12.062     Reference: January 14th, 2019
Gene Product: January 15th, 2019
Gene Model: January 14th, 2019
35 days agohsp12 heat shock protein12:
 
GRMZM2G158232
Qian, YX et al. 2019. Gene pp.doi: 10.1016/j.gene.2018.12.062     Reference: January 14th, 2019
Gene Product: January 15th, 2019
Gene Model: January 14th, 2019
36 days agohsp17.2 heat shock protein17.2: seedling expressed heat shock protein; cDNA sequence similar to other plant 18 kDa heat shock proteins but distinct in maize
3.04
GRMZM2G422240
Qian, YX et al. 2019. Gene pp.doi: 10.1016/j.gene.2018.12.062     Reference: January 14th, 2019
Gene Product: September 1st, 2003
Variation: September 1st, 2003
Gene Model: March 3rd, 2015
36 days agoles*-A467 lesion*-A467: recessive les* plants have late, large, necrotic lesions
 
   Johal, GS; Hulbert, SH; Briggs, SP. 1995. Disease lesion mimics of maize: A model for cell death in plants. Bioessays 17:685-692     Reference: September 1st, 2003
Variation: January 14th, 2019
36 days agoznf1 zinc finger protein1: glucose starved, root tip cDNA
9.03
GRMZM5G836222
Schnable, J; Freeling, M. 2011. PLoS One 6(3):e17855. doi:10.1371/journal.pone.0017855     Reference: September 27th, 2011
Gene Product: September 1st, 2003
Variation: January 14th, 2019
Gene Model: January 13th, 2019
36 days agocsu1118  :
9.07
GRMZM5G860976
Baysdorfer, C. 1996. Nucleotide sequence submission to dbEST     Reference: September 1st, 2003
Variation: September 1st, 2003
Gene Model: January 14th, 2019
36 days agocdj3 chaperone DNA J3: NCBI: putative dnaJ chaperone family protein
5.03
GRMZM2G134980
Qian, YX et al. 2019. Gene pp.doi: 10.1016/j.gene.2018.12.062     Reference: January 14th, 2019
Variation: March 24th, 2017
Gene Model: March 24th, 2017
36 days agohsp1 heat shock protein1: genomic clones, single copy (Southern blots), transcribed (Northern blots), transgenic (petunia) expression
8.01
   Qian, YX et al. 2019. Gene pp.doi: 10.1016/j.gene.2018.12.062     Reference: January 14th, 2019
Gene Product: September 1st, 2003
Variation: September 1st, 2003
36 days agohsp90 heat shock protein, 90 kDa: heat-induced; encoded protein interacts with HSP101
10.04
GRMZM5G833699
Qian, YX et al. 2019. Gene pp.doi: 10.1016/j.gene.2018.12.062     Reference: January 14th, 2019
Gene Product: January 14th, 2019
Variation: September 1st, 2003
Gene Model: November 3rd, 2014
36 days agohsp26 heat shock protein26: was umc195; cDNA, single mRNA species induced by heat shock, in vitro HSP26 imported by isolated chloroplasts, cross-reacts with anti-pea-chloroplast-HSP21 antibodies
1.03
GRMZM2G149647
Qian, YX et al. 2019. Gene pp.doi: 10.1016/j.gene.2018.12.062     Reference: January 14th, 2019
Gene Product: September 1st, 2003
Variation: January 30th, 2015
Gene Model: January 30th, 2015
36 days agocsu43  : gene specific probe, partially sequenced cDNA to leaf mRNA
9.04
GRMZM2G152105
Baysdorfer, C. 1993. Personal communication to MaizeDB     Reference: September 1st, 2003
Variation: September 1st, 2003
Gene Model: January 14th, 2019
36 days agocdj1 chaperone DNA J homolog1: leaf cDNA csu63, deduced amino acid sequence nearly identical to chaperone DNA J, multiple copies
1.11
GRMZM2G134917
Qian, YX et al. 2019. Gene pp.doi: 10.1016/j.gene.2018.12.062     Reference: January 14th, 2019
Gene Product: September 1st, 2003
Variation: September 29th, 2012
Gene Model: July 27th, 2016
36 days agohsp18f heat shock protein18f: induction by heat shock is developmentally constitutive
3.02
   Qian, YX et al. 2019. Gene pp.doi: 10.1016/j.gene.2018.12.062     Reference: January 14th, 2019
Gene Product: September 1st, 2003
Variation: July 18th, 2014
36 days agohsp70-4 heat shock protein70-4:
3.05
   Qian, YX et al. 2019. Gene pp.doi: 10.1016/j.gene.2018.12.062     Reference: January 14th, 2019
Gene Product: September 1st, 2003
Variation: January 2nd, 2013
36 days agocsu193  : single copy, novel leaf cDNA sequence
9.03
GRMZM2G019586
Baysdorfer, C. 1994. cDNA sequence submission to dbEST     Reference: September 1st, 2003
Variation: September 1st, 2003
Gene Model: January 14th, 2019
36 days agohsp6 heat shock protein6:
 
AC209784.3_FG007
Qian, YX et al. 2019. Gene pp.doi: 10.1016/j.gene.2018.12.062     Reference: January 14th, 2019
Gene Product: September 1st, 2003
Gene Model: January 14th, 2019
36 days agohsp7 heat shock protein7:
 
GRMZM5G802801
Qian, YX et al. 2019. Gene pp.doi: 10.1016/j.gene.2018.12.062     Reference: January 14th, 2019
Gene Product: September 1st, 2003
Gene Model: January 14th, 2019
36 days agohsp5 heat shock protein5:
9.06
GRMZM2G366532
Qian, YX et al. 2019. Gene pp.doi: 10.1016/j.gene.2018.12.062     Reference: January 14th, 2019
Gene Product: September 1st, 2003
Gene Model: January 14th, 2019
36 days agoIDP1637  :
9.00
GRMZM5G811223
    Variation: March 31st, 2005
Gene Model: January 14th, 2019
36 days agoc3h6 C3H-transcription factor 36: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
9.04
GRMZM2G086614
Yilmaz, A et al. 2009. Plant Physiol 149:171-180     Reference: May 12th, 2011
Variation: March 31st, 2005
Gene Model: January 14th, 2019
36 days agoIDP1669  : similar to Arabidopsis LRR receptor-like serine/threonine-protein kinase FEI 2
9.06
GRMZM2G479243
    Variation: March 31st, 2005
Gene Model: January 14th, 2019
36 days agoIDP1681  : similar to protein arginine N-methyltransferase 7 of A. thaliana
9.03
GRMZM2G037624
    Variation: March 31st, 2005
Gene Model: January 14th, 2019
36 days agoIDP1984  :
9.03
GRMZM2G171616
    Variation: March 31st, 2005
Gene Model: January 14th, 2019
36 days agoIDP2142  : similar to alpha-1,4-galacturonosyltransferase of A. thaliana
9.06
GRMZM2G113506
    Variation: March 31st, 2005
Gene Model: January 14th, 2019
36 days agohsp4 heat shock protein4:
7.02
GRMZM2G069651
Qian, YX et al. 2019. Gene pp.doi: 10.1016/j.gene.2018.12.062     Reference: January 14th, 2019
Gene Product: January 14th, 2019
Gene Model: January 14th, 2019
37 days agomez2 enhancer of zeste2:
9.04
GRMZM5G875502
Springer, N et al. 2002. Plant Physiol 128:1332-1345     Reference: January 5th, 2011
Gene Product: September 1st, 2003
Variation: January 13th, 2019
Gene Model: January 13th, 2019
37 days agoIDP1969  : similar to ferredoxin 2 of A. thaliana
9.01
GRMZM2G013607
    Variation: March 31st, 2005
Gene Model: January 13th, 2019
38 days agoAY110782  :
9.04
GRMZM2G431243
    Variation: September 25th, 2007
Gene Model: January 12th, 2019
38 days agoIDP111  : imilar to Arabidopsis CP12 domain-containing protein 1
9.01
GRMZM2G480850
    Variation: March 31st, 2005
Gene Model: January 12th, 2019
39 days agoanx1 annexin1:
 
GRMZM2G064993
He, F et al. 2019. J Exp Bot pp.doi: 10.1093/jxb/ery452     Reference: January 11th, 2019
Variation: October 16th, 2013
Gene Model: July 27th, 2016
39 days agobbx7 b-box7:
 
GRMZM5G813532
Shalmani, A et al. 2019. BMC Genomics 20:27     Reference: January 10th, 2019
Gene Product: January 11th, 2019
Gene Model: January 10th, 2019
39 days agobbx11 b-box11:
 
   Shalmani, A et al. 2019. BMC Genomics 20:27     Reference: January 10th, 2019
Gene Product: January 11th, 2019
39 days agobbx12 b-box12:
 
   Shalmani, A et al. 2019. BMC Genomics 20:27     Reference: January 10th, 2019
Gene Product: January 11th, 2019
39 days agobbx13 b-box13:
 
GRMZM2G438979
Shalmani, A et al. 2019. BMC Genomics 20:27     Reference: January 10th, 2019
Gene Product: January 11th, 2019
Gene Model: January 10th, 2019
39 days agobbx17 b-box17:
 
GRMZM2G146614
Shalmani, A et al. 2019. BMC Genomics 20:27     Reference: January 10th, 2019
Gene Product: January 11th, 2019
Gene Model: January 10th, 2019
39 days agobbx24 b-box24:
 
GRMZM2G354319
Shalmani, A et al. 2019. BMC Genomics 20:27     Reference: January 10th, 2019
Gene Product: January 11th, 2019
Gene Model: January 10th, 2019
39 days agobbx26 b-box26:
 
GRMZM2G415711
Shalmani, A et al. 2019. BMC Genomics 20:27     Reference: January 10th, 2019
Gene Product: January 11th, 2019
Gene Model: January 10th, 2019
39 days agobbx34 b-box34:
 
GRMZM2G056126
Shalmani, A et al. 2019. BMC Genomics 20:27     Reference: January 10th, 2019
Gene Product: January 11th, 2019
Gene Model: January 10th, 2019
39 days agoanx2 annexin2:
5.07
GRMZM2G061950
He, F et al. 2019. J Exp Bot pp.doi: 10.1093/jxb/ery452     Reference: January 11th, 2019
Variation: October 15th, 2013
Gene Model: July 27th, 2016
39 days agobbx6 b-box6:
 
GRMZM2G422644
Shalmani, A et al. 2019. BMC Genomics 20:27     Reference: January 10th, 2019
Gene Product: January 11th, 2019
Gene Model: January 10th, 2019
40 days agocol10 C2C2-CO-like-transcription factor 10: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Shalmani, A et al. 2019. BMC Genomics 20:27     Reference: January 10th, 2019
Gene Product: June 18th, 2018
40 days agocol13 C2C2-CO-like-transcription factor 13: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Shalmani, A et al. 2019. BMC Genomics 20:27     Reference: January 10th, 2019
Gene Product: June 18th, 2018
40 days agocol14 C2C2-CO-like-transcription factor 14: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Shalmani, A et al. 2019. BMC Genomics 20:27     Reference: January 10th, 2019
Gene Product: June 18th, 2018
40 days agocol2 C2C2-CO-like-transcription factor 2: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Shalmani, A et al. 2019. BMC Genomics 20:27     Reference: January 10th, 2019
Gene Product: June 18th, 2018
40 days agocol3 C2C2-CO-like-transcription factor 3: Functions as a repressor of flowering
 
   Shalmani, A et al. 2019. BMC Genomics 20:27     Reference: January 10th, 2019
Gene Product: June 18th, 2018
40 days agocol4 C2C2-CO-like-transcription factor 4: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Shalmani, A et al. 2019. BMC Genomics 20:27     Reference: January 10th, 2019
Gene Product: June 18th, 2018
40 days agocol5 C2C2-CO-like-transcription factor 5: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Shalmani, A et al. 2019. BMC Genomics 20:27     Reference: January 10th, 2019
Gene Product: June 18th, 2018
40 days agocol6 C2C2-CO-like-transcription factor 6: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Shalmani, A et al. 2019. BMC Genomics 20:27     Reference: January 10th, 2019
Gene Product: June 18th, 2018
40 days agocol7 C2C2-CO-like-transcription factor 7: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Shalmani, A et al. 2019. BMC Genomics 20:27     Reference: January 10th, 2019
Gene Product: June 18th, 2018
40 days agocol8 C2C2-CO-like-transcription factor 8: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Shalmani, A et al. 2019. BMC Genomics 20:27     Reference: January 10th, 2019
Gene Product: June 18th, 2018
40 days agocol9 C2C2-CO-like-transcription factor 9: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Shalmani, A et al. 2019. BMC Genomics 20:27     Reference: January 10th, 2019
Gene Product: June 18th, 2018
40 days agocol16 C2C2-CO-like-transcription factor 16:
1.06
GRMZM2G159996
Shalmani, A et al. 2019. BMC Genomics 20:27     Reference: January 10th, 2019
Gene Product: June 18th, 2018
Variation: December 7th, 2016
Gene Model: December 7th, 2016
40 days agoprf5 Profilin homolog5: Deduced amino acid sequence shares 95% identity with PRF4 (aka ZmPRO4) and 79-80% identity with other maize profilins PRF1, PRF2 and PRF3.
9.02
GRMZM5G877388
Shalmani, A et al. 2019. BMC Genomics 20:27     Reference: January 10th, 2019
Gene Product: September 1st, 2003
Variation: July 14th, 2008
Gene Model: January 15th, 2015
40 days agocol12 2C2-CO-like-transcription factor 12: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.NCBI: zinc finger protein CONSTANS-LIKE 16
5.07
GRMZM2G041991
Shalmani, A et al. 2019. BMC Genomics 20:27     Reference: January 10th, 2019
Gene Product: September 1st, 2003
Variation: March 31st, 2017
Gene Model: March 31st, 2017
40 days agocol11 C2C2-CO-like-transcription factor 11: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also
2.04
GRMZM2G095598
Shalmani, A et al. 2019. BMC Genomics 20:27     Reference: January 10th, 2019
Gene Product: June 18th, 2018
Variation: October 9th, 2018
Gene Model: June 18th, 2018
40 days agodbb2 double B-box zinc finger protein2:
 
GRMZM2G131982
Shalmani, A et al. 2019. BMC Genomics 20:27     Reference: January 10th, 2019
Gene Product: May 10th, 2017
Gene Model: May 10th, 2017
40 days agodbb3 double B-box zinc finger protein3: similar to Arabidopsis light-regulated zinc finger protein 1
 
GRMZM5G834596
Shalmani, A et al. 2019. BMC Genomics 20:27     Reference: January 10th, 2019
Gene Product: May 10th, 2017
Variation: May 10th, 2017
Gene Model: May 10th, 2017
40 days agodbb5 double B-box zinc finger protein5:
 
GRMZM2G118884
Shalmani, A et al. 2019. BMC Genomics 20:27     Reference: January 10th, 2019
Gene Product: May 10th, 2017
Gene Model: May 10th, 2017
40 days agodbb7 double B-box zinc finger protein7:
 
GRMZM2G110541
Shalmani, A et al. 2019. BMC Genomics 20:27     Reference: January 10th, 2019
Gene Product: May 10th, 2017
Gene Model: May 10th, 2017
40 days agodbb8 double B-box zinc finger protein8:
 
GRMZM2G070446
Shalmani, A et al. 2019. BMC Genomics 20:27     Reference: January 10th, 2019
Gene Product: May 10th, 2017
Variation: May 10th, 2017
Gene Model: May 10th, 2017
40 days agodbb9 double B-box zinc finger protein9:
 
GRMZM2G116475
Shalmani, A et al. 2019. BMC Genomics 20:27     Reference: January 10th, 2019
Gene Product: May 10th, 2017
Variation: May 10th, 2017
Gene Model: May 10th, 2017
40 days agodbb10 double B-box zinc finger protein10:
 
GRMZM2G143718
Shalmani, A et al. 2019. BMC Genomics 20:27     Reference: January 10th, 2019
Gene Product: May 10th, 2017
Variation: May 10th, 2017
Gene Model: May 10th, 2017
40 days agodbb11 double B-box zinc finger protein11:
 
GRMZM2G028594
Shalmani, A et al. 2019. BMC Genomics 20:27     Reference: January 10th, 2019
Gene Product: May 10th, 2017
Variation: May 10th, 2017
Gene Model: May 10th, 2017
40 days agodbb12 double B-box zinc finger protein12:
 
GRMZM2G098442
Shalmani, A et al. 2019. BMC Genomics 20:27     Reference: January 10th, 2019
Gene Product: May 10th, 2017
Gene Model: May 10th, 2017
40 days agocol17 C2C2-CO-like-transcription factor 17:
 
GRMZM2G176173
Shalmani, A et al. 2019. BMC Genomics 20:27     Reference: January 10th, 2019
Gene Product: June 18th, 2018
Gene Model: June 16th, 2018
40 days agocol19 C2C2-CO-like-transcription factor 19:
 
GRMZM2G092363
Shalmani, A et al. 2019. BMC Genomics 20:27     Reference: January 10th, 2019
Gene Product: June 18th, 2018
Gene Model: June 16th, 2018
40 days agocol15 C2C2-CO-like-transcription factor 1:
1.04
GRMZM2G134671
Shalmani, A et al. 2019. BMC Genomics 20:27     Reference: January 10th, 2019
Gene Product: June 18th, 2018
Gene Model: June 16th, 2018
40 days agodbb4 double B-box zinc finger protein4:
4.05
GRMZM2G019335
Shalmani, A et al. 2019. BMC Genomics 20:27     Reference: January 10th, 2019
Gene Product: May 10th, 2017
Variation: May 10th, 2017
Gene Model: May 10th, 2017
41 days agofae2 fatty acid elongase2:
9.03
   Schreiber, L et al. 2000. Biochem Soc Trans 28:647-649     Reference: May 29th, 2010
Variation: January 9th, 2019
41 days agobt2 brittle endosperm2: like bt1; endosperm ADPG pyrophosphorylase subunit; with sh2 complements E. coli glgC
4.05
   Boehlein, SK et al. 2018. Frontiers Plant Sci pp.doi: 10.3389/fpls.2018.01849     Reference: January 9th, 2019
Gene Product: November 4th, 2014
Variation: December 4th, 2018
41 days agogl3 glossy3: like gl1, but surface wax has all rice-grain-type particles
4.08
GRMZM2G162434
Rallapalli, G et al. 2019. BMC Bioinformatics 20:9     Reference: January 9th, 2019
Gene Product: June 2nd, 2012
Variation: June 2nd, 2012
Gene Model: June 2nd, 2012
41 days agosh2 shrunken2: inflated, transparent, sweet kernels collapse on drying, becoming angular and brittle; endosperm ADPG pyrophosphorylase subunit (compare bt2); application: "supersweet" sweet corn - kernels sugar-sweet for long period
3.09
   Boehlein, SK et al. 2018. Frontiers Plant Sci pp.doi: 10.3389/fpls.2018.01849     Reference: January 9th, 2019
Gene Product: November 4th, 2014
Variation: January 9th, 2019
41 days agophp20075b(ext)  : similar to Arabidopsis putative gibberellin-regulated protein
9.03
GRMZM2G105364
Noonan, J et al. 2017. Int J Mol Sci 8:E1938     Reference: September 16th, 2017
Variation: September 1st, 2003
Gene Model: January 9th, 2019
41 days agoglpdh1 glycerol-3-phosphate dehydrogenase1: NAD+-dependent type A
 
GRMZM2G155348
Zhao, Y et al. 2019. BMC Plant Biology 19:16     Reference: January 9th, 2019
Gene Product: July 12th, 2018
Gene Model: July 11th, 2018
42 days agomac1 multiple archesporial cells1: (was lar*-487) several archesporial cells undergo normal meiosis; plants partially female sterile but completely male sterileBeware: this locus could accidentally be confused with the act1 (actin 1) locus, which also was called MAc1 in past publications!
10.03
GRMZM2G027522
van der Linde, K; Walbot, V. 2019. Current Topics in Developmental Biology 131:239-256     Reference: January 8th, 2019
Gene Product: August 2nd, 2012
Variation: August 10th, 2012
Gene Model: July 26th, 2012
Recommended by Chung-Ju Rachel Wang:
December 19th, 2013
42 days agoms*-6015  :
 
   van der Linde, K; Walbot, V. 2019. Current Topics in Developmental Biology 131:239-256     Reference: January 8th, 2019
Variation: August 8th, 2014
42 days agoam1 ameiotic1: male and female sterility - anaphase I equatorial; alleles am1-pra1(was pra1), am1-2 (was am2)affects switch to meiotic cell cycle
5.02
   van der Linde, K; Walbot, V. 2019. Current Topics in Developmental Biology 131:239-256     Reference: January 8th, 2019
Variation: August 11th, 2011
42 days agoms13 male sterile13: like ms5; affected at microspore vacuolation
5.00 - 5.01
   van der Linde, K; Walbot, V. 2019. Current Topics in Developmental Biology 131:239-256     Reference: January 8th, 2019
Variation: May 27th, 2004
42 days agoms22 male sterile22: pollen mother cells degenerate
7.02
GRMZM2G442791
van der Linde, K; Walbot, V. 2019. Current Topics in Developmental Biology 131:239-256     Reference: January 8th, 2019
Gene Product: August 12th, 2012
Variation: February 12th, 2013
Gene Model: August 11th, 2012
42 days agoms23 male sterile23: pollen mother cells degenerate
8.01 - 8.02
GRMZM2G021276
van der Linde, K; Walbot, V. 2019. Current Topics in Developmental Biology 131:239-256     Reference: January 8th, 2019
Gene Product: September 14th, 2016
Variation: December 4th, 2016
Gene Model: December 4th, 2016
42 days agoms9 male sterile9: breakdown of pollen mother cellsLocus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
1.03
GRMZM2G006981
van der Linde, K; Walbot, V. 2019. Current Topics in Developmental Biology 131:239-256     Reference: January 8th, 2019
Gene Product: September 1st, 2003
Variation: July 18th, 2015
Gene Model: July 16th, 2015
42 days agoes4 embryo sac4: one of 4-5 copy gene family; pre-zygotic, embryo sac specific; required for pollen tube growth arrest and burst
 
GRMZM2G128301
Zhou, LZ; Dresselhaus, T. 2019. Current Topics in Developmental Biology 131:453-496     Reference: January 8th, 2019
Gene Product: April 22nd, 2011
Variation: April 25th, 2011
Gene Model: April 22nd, 2011
42 days agoes1 embryo sac1: one of 4-5 copy gene family; pre-zygotic embryo sac specific; required for pollen tube growth arrest and burst
 
GRMZM2G012012
Zhou, LZ; Dresselhaus, T. 2019. Current Topics in Developmental Biology 131:453-496     Reference: January 8th, 2019
Gene Product: April 22nd, 2011
Variation: April 25th, 2011
Gene Model: April 22nd, 2011
42 days agoes2 embryo sac2: one of 4-5 copy gene family; pre-zygotic embryo sac specific; required for pollen tube growth arrest and burst
 
GRMZM2G128301
Zhou, LZ; Dresselhaus, T. 2019. Current Topics in Developmental Biology 131:453-496     Reference: January 8th, 2019
Gene Product: April 22nd, 2011
Gene Model: April 22nd, 2011
42 days agoes3 embryo sac3: one of 4-5 copy gene family; pre-zygotic embyro sac specific; required for pollen tube growth arrest and burst
 
GRMZM2G128301
Zhou, LZ; Dresselhaus, T. 2019. Current Topics in Developmental Biology 131:453-496     Reference: January 8th, 2019
Gene Product: April 22nd, 2011
Gene Model: April 22nd, 2011
42 days agoms32 male sterile32: like ms1
2.00 - 2.10
GRMZM2G163233
van der Linde, K; Walbot, V. 2019. Current Topics in Developmental Biology 131:239-256     Reference: January 8th, 2019
Gene Product: September 2nd, 2013
Variation: December 4th, 2016
Gene Model: September 2nd, 2013
42 days agoocl4 outer cell layer4:
1.05 - 1.06
   van der Linde, K; Walbot, V. 2019. Current Topics in Developmental Biology 131:239-256     Reference: January 8th, 2019
Gene Product: September 1st, 2003
Variation: February 23rd, 2013
42 days agosut1 sucrose transporter1: mutant plants are deficient in leaf sucrose unloading to pholem; mature leaves hyperaccumulate carbohydrates and display leaf chlorosis with premature senescence
1.02
GRMZM2G034302
Sosso, D et al. 2018. Plant Physiol. doi: 10.1104/pp.18.01435     Reference: January 8th, 2019
Gene Product: September 14th, 2013
Variation: April 16th, 2013
Gene Model: April 16th, 2013
42 days agosweet4c sugars will eventually be exported transporter4c: Mutants are defective in seed filling
5.04
GRMZM2G137954
Sosso, D et al. 2018. Plant Physiol. doi: 10.1104/pp.18.01435   LOC_Os02g19820 (MSU/TIGR) Reference: January 8th, 2019
Gene Product: November 4th, 2015
Variation: November 3rd, 2015
Gene Model: November 3rd, 2015
42 days agosweet4b sugars will eventually be exported transporter4b:
5.04
GRMZM2G144581
Sosso, D et al. 2018. Plant Physiol. doi: 10.1104/pp.18.01435     Reference: January 8th, 2019
Gene Product: November 4th, 2015
Gene Model: November 3rd, 2015
42 days agopmei3 pectin methylesterase inhibitor3:
6.05
   Woriedh, M et al. 2013. Plant Reproduction 26:255-266     Reference: January 8th, 2019
Gene Product: January 8th, 2019
Variation: September 25th, 2007
42 days agosweet11a sugars will eventually be exported transporter11:
1.06
GRMZM2G368827
Sosso, D et al. 2018. Plant Physiol. doi: 10.1104/pp.18.01435     Reference: January 8th, 2019
Gene Product: November 4th, 2015
Gene Model: November 3rd, 2015
42 days agotcl1 tapetal cell layer1: Mutant fails to form coherent middle and tapetal layers, and there are extra cells between the endothecial and inner sporogenous (AR) cells.
 
   van der Linde, K; Walbot, V. 2019. Current Topics in Developmental Biology 131:239-256     Reference: January 8th, 2019
Variation: February 12th, 2013
42 days agosweet4a sugars will eventually be exported transporter4a:
 
GRMZM2G000812
Sosso, D et al. 2018. Plant Physiol. doi: 10.1104/pp.18.01435     Reference: January 8th, 2019
Gene Product: November 4th, 2015
Gene Model: November 3rd, 2015
42 days agomsp1 multiple sporocyte1: A conserved ligand-receptor pair with mac1
 
GRMZM2G447447
van der Linde, K; Walbot, V. 2019. Current Topics in Developmental Biology 131:239-256   AT5G07280 (TAIR)
LOC_Os01g68870 (MSU/TIGR)
Reference: January 8th, 2019
Gene Product: February 17th, 2018
Gene Model: February 17th, 2018
42 days agopmei2 pectin methylesterase inhibitor2:
 
GRMZM2G122230
Woriedh, M et al. 2013. Plant Reproduction 26:255-266     Reference: January 8th, 2019
Gene Product: January 8th, 2019
Gene Model: January 8th, 2019
42 days agopmei4 pectin methylesterase inhibitor4:
 
GRMZM2G457612
Woriedh, M et al. 2013. Plant Reproduction 26:255-266     Reference: January 8th, 2019
Gene Product: January 8th, 2019
Gene Model: January 8th, 2019
42 days agopmei5 pectin methylesterase inhibitor5:
 
GRMZM5G888934
Woriedh, M et al. 2013. Plant Reproduction 26:255-266     Reference: January 8th, 2019
Gene Product: January 8th, 2019
Gene Model: January 8th, 2019
42 days agopmei6 pectin methylesterase inhibitor6:
 
GRMZM2G343236
Woriedh, M et al. 2013. Plant Reproduction 26:255-266     Reference: January 8th, 2019
Gene Product: January 8th, 2019
Gene Model: January 8th, 2019
42 days agopmei1 pectin methylesterase inhibitor1:
6.07
GRMZM2G079661
Woriedh, M et al. 2013. Plant Reproduction 26:255-266     Reference: January 8th, 2019
Gene Product: January 8th, 2019
Gene Model: January 8th, 2019
46 days agortl3 reversion-to-ethylene sensitivity1 like3: Over-expression reduces ethylene responses (Shi et al. 2016)
 
GRMZM2G121208
Zheng, LJ et al. 2019. Mol Genet Genomics pp.doi: 10.1007/s00438-018-1524-4     Reference: January 4th, 2019
Variation: June 10th, 2016
Gene Model: June 10th, 2016
46 days agoexpb14 beta expansin14: may be involved in seed expansion during kernel development
 
GRMZM2G118873
Zheng, LJ et al. 2019. Mol Genet Genomics pp.doi: 10.1007/s00438-018-1524-4     Reference: January 4th, 2019
Gene Product: April 24th, 2008
Gene Model: January 4th, 2019
46 days agoexpb15 beta expansin15: may be involved in seed expansion during kernel development
 
GRMZM2G121308
Zheng, LJ et al. 2019. Mol Genet Genomics pp.doi: 10.1007/s00438-018-1524-4     Reference: January 4th, 2019
Gene Product: April 24th, 2008
Gene Model: January 4th, 2019
48 days agoaasr1 abscisic acid stress ripening1: protects the major ARS protein in maize; protects kernel yield under water deficit; SSR pio059, IDP9044
10.02
GRMZM2G136910
Zhang, J et al. 2019. Int J Mol Sci 20:133     Reference: January 2nd, 2019
Gene Product: January 2nd, 2019
Variation: December 30th, 2011
Gene Model: November 1st, 2011
48 days agoaasr2 abscisic acid stress ripening2:
2.05
GRMZM5G854138
Zhang, J et al. 2019. Int J Mol Sci 20:133     Reference: January 2nd, 2019
Gene Product: December 1st, 2011
Variation: November 22nd, 2011
Gene Model: November 1st, 2011
48 days agoaasr6 abscisic acid stress ripening6:
5.04
GRMZM2G057841
Zhang, J et al. 2019. Int J Mol Sci 20:133     Reference: January 2nd, 2019
Gene Product: January 2nd, 2019
Variation: November 12th, 2014
Gene Model: November 1st, 2011
48 days agoaasr9 abscisic acid stress ripening9:
3.04
GRMZM2G383699
Zhang, J et al. 2019. Int J Mol Sci 20:133     Reference: January 2nd, 2019
Gene Product: January 2nd, 2019
Gene Model: November 1st, 2011
48 days agobss1 bundle sheath strands specific1: encodes a photosynthesis-related protein with a deduced amino acid sequence with high homology to tomato Asr1 in the C-terminal region; stress-inducilible;
8.06
GRMZM2G168552
Zhang, J et al. 2019. Int J Mol Sci 20:133     Reference: January 2nd, 2019
Gene Product: December 1st, 2011
Variation: November 1st, 2011
Gene Model: November 1st, 2011
48 days agoaasr3 abscisic acid stress ripening3:
2.04
GRMZM5G806182
Zhang, J et al. 2019. Int J Mol Sci 20:133     Reference: January 2nd, 2019
Gene Product: December 1st, 2011
Gene Model: January 2nd, 2019
48 days agoaasr5 abscisic acid stress ripening5:
10.04
GRMZM2G052100
Zhang, J et al. 2019. Int J Mol Sci 20:133     Reference: January 2nd, 2019
Gene Product: November 4th, 2011
Variation: April 14th, 2007
Gene Model: November 1st, 2011
48 days agoaasr7 abscisic acid stress ripening7:
 
GRMZM2G014797
Zhang, J et al. 2019. Int J Mol Sci 20:133     Reference: January 2nd, 2019
Gene Product: January 2nd, 2019
Gene Model: November 1st, 2011
48 days agoaasr8 abscisic acid stress ripening8:
 
GRMZM2G314075
Zhang, J et al. 2019. Int J Mol Sci 20:133     Reference: January 2nd, 2019
Gene Product: January 2nd, 2019
Gene Model: November 1st, 2011
48 days agoaasr10 abscisic acid stress ripening10:
 
GRMZM2G009792
Zhang, J et al. 2019. Int J Mol Sci 20:133     Reference: January 2nd, 2019
Gene Product: January 2nd, 2019
Gene Model: January 2nd, 2019
50 days agoakin2 AKINbetagamma-1 protein kinase2:
1.03
   Wang, J et al. 2018. Gene doi: 10.1016/j.gene.2018.     Reference: December 31st, 2018
Gene Product: December 31st, 2018
Variation: September 25th, 2007
50 days agosnrk1a2 SNF1-related kinase alpha1-like2:
 
GRMZM2G180704
Wang, J et al. 2018. Gene doi: 10.1016/j.gene.2018.     Reference: December 31st, 2018
Gene Product: December 31st, 2018
Gene Model: February 13th, 2014
50 days agosnrk1a1 SNF1-related kinase alpha1-like1:
6.06
GRMZM2G105401
Wang, J et al. 2018. Gene doi: 10.1016/j.gene.2018.     Reference: December 31st, 2018
Gene Product: December 31st, 2018
Gene Model: February 7th, 2018
53 days agoabp1 auxin binding protein1: putative auxin receptor, single band in Southerns, endoplasmic reticulum and plasma membrane locales (aka axr1, aux311)Dominant Scmv1 and Scmv2 confer resistance
3.05 - 3.05
   Matthes, MS et al. 2018. Mol Plant. doi: 10.1016/j.molp.2018.12.012     Reference: December 28th, 2018
Gene Product: September 1st, 2003
Variation: August 23rd, 2017
53 days agopin12 PIN-formed protein12: similar to Arabidopsis PIN10 (Forestan et al 2012)
9.02
GRMZM2G160496
Matthes, MS et al. 2018. Mol Plant. doi: 10.1016/j.molp.2018.12.012     Reference: December 28th, 2018
Gene Product: April 21st, 2014
Gene Model: January 24th, 2013
53 days agopin9 PIN-formed protein9: similar to Arabidopsis PIN9 (Forestan et al 2012)
3.06
GRMZM5G859099
Matthes, MS et al. 2018. Mol Plant. doi: 10.1016/j.molp.2018.12.012     Reference: December 28th, 2018
Gene Product: April 21st, 2014
Gene Model: January 24th, 2013
53 days agobr2 brachytic2: like br1; mi1 is allelic and preceded (1935), but br2 name is retained due to long usagelike Arabidopsis ABC transporter B family member 1
1.06 - 1.07
GRMZM2G315375
Yue, R et al. 2015. PLoS One 10:e0118751     Reference: December 28th, 2018
Gene Product: May 1st, 2012
Variation: June 22nd, 2018
Gene Model: April 28th, 2012
53 days agoaic1 auxin import carrier1: cDNA encoding a protein with a deduced amino acid showing 73% identity to AtAUX1.
1.05
GRMZM2G129413
Yue, R et al. 2015. PLoS One 10:e0118751   AT2G21050 (TAIR) Reference: December 28th, 2018
Gene Product: September 1st, 2003
Variation: September 1st, 2003
Gene Model: November 21st, 2015
53 days agobif2 barren inflorescence2: recessive few-branched tassel, normally no pollen shed; variable expression on ear with 0-2 spikelets produced at each floral node
1.05
   Matthes, MS et al. 2018. Mol Plant. doi: 10.1016/j.molp.2018.12.012   AT2G34650 (TAIR) Reference: December 28th, 2018
Gene Product: July 19th, 2012
Variation: October 23rd, 2013
53 days agotar1 tryptophan aminotransferase related1:
6.05
GRMZM2G127160
Matthes, MS et al. 2018. Mol Plant. doi: 10.1016/j.molp.2018.12.012     Reference: December 28th, 2018
Gene Product: April 30th, 2011
Gene Model: June 4th, 2012
53 days agoabp4 auxin binding protein homolog4: putative auxin receptor, genomic clone, promoter-reporter gene fusion functional in maize leaf protoplasts. cDNA ZmERabp4 probes one band on Southerns
10.03
   Matthes, MS et al. 2018. Mol Plant. doi: 10.1016/j.molp.2018.12.012     Reference: December 28th, 2018
Gene Product: September 1st, 2003
Variation: May 26th, 2005
53 days agoaic3 auxin import carrier3: part of gene family that maintains auxin distribution pattern against environmental or developmental influences
1.03
GRMZM2G149481
Yue, R et al. 2015. PLoS One 10:e0118751     Reference: December 28th, 2018
Gene Product: April 19th, 2017
Gene Model: April 19th, 2017
53 days agorum1 rootless with undetectable meristems1: primordia for seminal roots and for laterals on the primary root absent
 
GRMZM2G037368
Matthes, MS et al. 2018. Mol Plant. doi: 10.1016/j.molp.2018.12.012     Reference: December 28th, 2018
Gene Product: June 16th, 2014
Variation: June 16th, 2014
Gene Model: June 16th, 2014
53 days agopin5 PIN-formed protein5: similar to Arabiodopsis PIN5 (Forestan et al 2012)
 
GRMZM2G025742
Matthes, MS et al. 2018. Mol Plant. doi: 10.1016/j.molp.2018.12.012     Reference: December 28th, 2018
Gene Product: April 21st, 2014
Gene Model: January 24th, 2013
53 days agopin7 PIN-formed protein7: simlar to Arabiodopsis PIN5 (Forestan et al 2012)
 
GRMZM2G148648
Matthes, MS et al. 2018. Mol Plant. doi: 10.1016/j.molp.2018.12.012     Reference: December 28th, 2018
Gene Product: April 21st, 2014
Gene Model: January 24th, 2013
53 days agopin11 PIN-formed protein11: similar to Arabiodopsis PIN5 (Forestan et al 2012)
 
GRMZM2G040911
Matthes, MS et al. 2018. Mol Plant. doi: 10.1016/j.molp.2018.12.012     Reference: December 28th, 2018
Gene Product: April 21st, 2014
Gene Model: January 24th, 2013
53 days agopin10 PIN-formed protein10: similar to Arabidopsis PIN10 (Forestan et al 2012)
 
GRMZM2G126260
Matthes, MS et al. 2018. Mol Plant. doi: 10.1016/j.molp.2018.12.012     Reference: December 28th, 2018
Gene Product: April 21st, 2014
Gene Model: January 24th, 2013
53 days agopin4 PIN-formed protein4: auxin efflux carriter similar to Arabidopsis PIN1 (Forestan et al 2012), but from PIN clade not found in all flowering plants save for the Brassicacease (O'Connor 2014 et al
4.08
GRMZM2G171702
Matthes, MS et al. 2018. Mol Plant. doi: 10.1016/j.molp.2018.12.012     Reference: December 28th, 2018
Gene Product: April 21st, 2014
Gene Model: January 24th, 2013
53 days agoatl1 auxin transporter-like1: mutant tassels have reduced branch numbers; bald tip on ears with fewer spikelets per row, and agravitropic root growth
 
GRMZM2G127949
Yue, R et al. 2015. PLoS One 10:e0118751   AT2G38120 (TAIR)
LOC_Os01g63770 (MSU/TIGR)
Reference: December 28th, 2018
Gene Product: April 19th, 2017
Variation: April 19th, 2017
Gene Model: March 12th, 2015
53 days agoaic2 auxin import carrier2:
 
GRMZM2G045057
Yue, R et al. 2015. PLoS One 10:e0118751   AT2G21050 (TAIR) Reference: December 28th, 2018
Gene Product: September 1st, 2003
Variation: August 1st, 2017
Gene Model: August 1st, 2017
53 days agoyuc7 yucca7:
 
GRMZM2G480386
Matthes, MS et al. 2018. Mol Plant. doi: 10.1016/j.molp.2018.12.012     Reference: December 28th, 2018
Gene Product: June 18th, 2018
Gene Model: August 19th, 2017
53 days agotar2 tryptophan aminotransferase related2:
 
GRMZM2G066345
Matthes, MS et al. 2018. Mol Plant. doi: 10.1016/j.molp.2018.12.012     Reference: December 28th, 2018
Gene Product: April 30th, 2011
Gene Model: August 19th, 2017
53 days agoaic4 auxin import carrier4: part of gene family that maintains auxin distribution pattern against environmental or developmental influences
 
GRMZM2G067022
Yue, R et al. 2015. PLoS One 10:e0118751     Reference: December 28th, 2018
Gene Product: April 19th, 2017
Gene Model: December 28th, 2018
53 days agotir1 transport inhibitor response1: encodes a member of a class of F-BOX proteins shown to bind auxin and facilitate degradation of the transcriptional repressor Aux/IAA proteins
 
GRMZM2G135978
Matthes, MS et al. 2018. Mol Plant. doi: 10.1016/j.molp.2018.12.012   LOC_Os05g05800 (MSU/TIGR)
Os05g0150500 (Gramene)
Reference: December 28th, 2018
Gene Product: July 25th, 2017
Gene Model: December 28th, 2018
53 days agopin2 PIN-formed protein2: see pin1
5.06
GRMZM2G074267
Matthes, MS et al. 2018. Mol Plant. doi: 10.1016/j.molp.2018.12.012     Reference: December 28th, 2018
Gene Product: April 21st, 2014
Variation: June 11th, 2007
Gene Model: June 7th, 2012
53 days agopin8 PIN-formed protein8: similar to Arabidopsis PIN8 (Forestan et al 2012)
3.07
GRMZM5G839411
Matthes, MS et al. 2018. Mol Plant. doi: 10.1016/j.molp.2018.12.012     Reference: December 28th, 2018
Gene Product: April 21st, 2014
Gene Model: January 24th, 2013
53 days agotar3 tryptophan aminotransferase related3:
6.05
GRMZM2G141810
Matthes, MS et al. 2018. Mol Plant. doi: 10.1016/j.molp.2018.12.012     Reference: December 28th, 2018
Gene Product: April 30th, 2011
Gene Model: August 22nd, 2013
56 days agons2 narrow sheath2: embryonic transcription factor; duplicate factor with ns1; closely related to 2 other WOX3 genes, wox3a and wox3b, aka hb82, hb16 (Grassius named)
4.08
   Richardson, AE; Hake, S. 2018. Plants 8: 4     Reference: December 25th, 2018
Gene Product: August 25th, 2017
Variation: June 29th, 2005
56 days agolgn1 liguleless narrow1: Mutant leaves are narrow and branching in the inflorescence is reduced.
 
GRMZM2G134382
Richardson, AE; Hake, S. 2018. Plants 8: 4     Reference: December 25th, 2018
Gene Product: January 24th, 2013
Variation: January 15th, 2016
Gene Model: January 3rd, 2013
56 days agohsf1 hairy sheath frayed1: dominant Hsf1 plants have pubescent sheaths and leaf margins; liguled enations at leaf margins
5.06 - 5.07
   Richardson, AE; Hake, S. 2018. Plants 8: 4     Reference: December 25th, 2018
Variation: September 1st, 2003
56 days agokn1 knotted1: dominant Kn1 plants have localized proliferation of tissue at vascular bundles on leaf
1.10
   Richardson, AE; Hake, S. 2018. Plants 8: 4     Reference: December 25th, 2018
Variation: December 6th, 2013
56 days agolg1 liguleless1: In the liguleless1 mutant, ligule and auricle are missing; leaves are upright
2.01
   Richardson, AE; Hake, S. 2018. Plants 8: 4     Reference: December 25th, 2018
Gene Product: December 18th, 2014
Variation: November 8th, 2007
56 days agolg2 liguleless2: like lg1, less extreme
3.06
   Richardson, AE; Hake, S. 2018. Plants 8: 4     Reference: December 25th, 2018
Gene Product: August 22nd, 2014
Variation: August 20th, 2014
56 days agolg3 liguleless3: dominant Lg3 plants lack ligule; leaves upright, broad, often concave and pleated; homeobox similar to knox5 and knox11
3.04
   Richardson, AE; Hake, S. 2018. Plants 8: 4     Reference: December 25th, 2018
Gene Product: August 22nd, 2014
Variation: March 16th, 2015
56 days agolg4 liguleless4: dominant Lg4 plants lack ligule and auricle but show vestiges sporadically in bladeclass I homeobox; cDNA and genomic clones; sequence and expression similar to lg3 and knox5
8.05
GRMZM2G094241
Richardson, AE; Hake, S. 2018. Plants 8: 4     Reference: December 25th, 2018
Gene Product: August 22nd, 2014
Variation: May 18th, 2012
Gene Model: May 24th, 2012
56 days agotru1 tassels replace upper ears1: upper ear branches tassel-like, tillers bear ears
3.04 - 3.10
GRMZM2G039867
Richardson, AE; Hake, S. 2018. Plants 8: 4     Reference: December 25th, 2018
Gene Product: December 17th, 2013
Variation: December 18th, 2013
Gene Model: December 17th, 2013
56 days agowab1 Wavy auricles in blades1: dominant confers auricle tissue in blade portion of leafrecessive mutants showed extremely acute tassel branch angles accompanied by a significant reduction in the size of the pulvinus compared with normal plants
2.06 - 2.07
GRMZM2G110242
Richardson, AE; Hake, S. 2018. Plants 8: 4   LOC_Os09g24480 (MSU/TIGR)
Os09g0410500 (Gramene)
Reference: December 25th, 2018
Gene Product: September 14th, 2016
Variation: November 2nd, 2014
Gene Model: November 2nd, 2014
56 days agons1 narrow sheath1: plant brachytic, duplicate factor with ns2; leaf sheath and blade taper, blade widens toward tip; husks narrowed, ears exposed
2.05
   Richardson, AE; Hake, S. 2018. Plants 8: 4     Reference: December 25th, 2018
Gene Product: August 25th, 2017
Variation: February 20th, 2015
56 days agogn1 gnarley1: dominant Gn1 characterized by reduced internodal length, sinuously curving culm, lack of distinct boundary between blade and sheath, extra silks
2.10
   Richardson, AE; Hake, S. 2018. Plants 8: 4     Reference: December 25th, 2018
Gene Product: September 1st, 2003
Variation: May 30th, 2014
56 days agobrd1 brassinosteroid-deficient dwarf1: Mutant plants have essentially no internode elongation and exhibit no etiolation response when germinated in the dark.
 
GRMZM2G103773
Richardson, AE; Hake, S. 2018. Plants 8: 4     Reference: December 25th, 2018
Gene Product: February 18th, 2012
Variation: March 5th, 2012
Gene Model: February 15th, 2012
56 days agobri1a brassinosteroid insensitive1a: Encodes a brassinosteroid receptor
 
GRMZM2G048294
Richardson, AE; Hake, S. 2018. Plants 8: 4   AT4G39400 (TAIR)
LOC_Os01g52050 (MSU/TIGR)
Reference: December 25th, 2018
Variation: July 17th, 2015
Gene Model: July 16th, 2015
56 days agobri1b brassinosteroid insensitive1b: Encodes a brassinosteroid receptor
 
GRMZM2G449830
Richardson, AE; Hake, S. 2018. Plants 8: 4     Reference: December 25th, 2018
Variation: July 17th, 2015
Gene Model: July 16th, 2015
57 days agosep1 selenoprotein1: NCBI: selenoprotein family proteincontributes to tolerance of both osmotic and salinity stress
3.05 - 3.06
GRMZM2G109429
Zhu, JT et al. 2018. Plant Cell Environ pp.doi: 10.1111/pce.13507     Reference: December 24th, 2018
Gene Product: December 24th, 2018
Variation: December 24th, 2018
Gene Model: March 3rd, 2017
57 days agouggt1 UDP-glucose:glycoprotein glucosyltransferase1: protein product interacts with sep1 product;
 
GRMZM5G846198
Zhu, JT et al. 2018. Plant Cell Environ pp.doi: 10.1111/pce.13507     Reference: December 24th, 2018
Gene Product: December 24th, 2018
Gene Model: December 24th, 2018
59 days agocyc13 cyclin13:
4.07
GRMZM2G075117
Garza-Aguilar, SM et al. 2018. Plant Sci pp.doi: 10.1016/j.plantsci.2018.12.020     Reference: December 22nd, 2018
Gene Product: June 26th, 2009
Variation: March 15th, 2017
Gene Model: March 15th, 2017
59 days agocki1 cyclin-dependent kinase inhibitor1:
1.08
GRMZM2G116885
Garza-Aguilar, SM et al. 2018. Plant Sci pp.doi: 10.1016/j.plantsci.2018.12.020     Reference: December 22nd, 2018
Gene Product: March 8th, 2017
Variation: December 6th, 2016
Gene Model: December 6th, 2016
59 days agocyc14 cyclin14: NCBI: cyclin-D4-2-like
1.07
GRMZM2G133413
Garza-Aguilar, SM et al. 2018. Plant Sci pp.doi: 10.1016/j.plantsci.2018.12.020     Reference: December 22nd, 2018
Gene Product: June 26th, 2009
Variation: January 19th, 2017
Gene Model: January 19th, 2017
59 days agocdc2 cell division control protein homolog2: cDNA sequence homologous to cdc2/cdc28 subfamily of serine/threonine protein kinases, complements yeast cdc28
1.01
GRMZM2G008327
Garza-Aguilar, SM et al. 2018. Plant Sci pp.doi: 10.1016/j.plantsci.2018.12.020     Reference: December 22nd, 2018
Gene Product: December 29th, 2016
Variation: April 23rd, 2010
Gene Model: March 30th, 2015
59 days agocdc3 cell division control protein homolog3:
3.10
GRMZM2G495626
Garza-Aguilar, SM et al. 2018. Plant Sci pp.doi: 10.1016/j.plantsci.2018.12.020     Reference: December 22nd, 2018
Gene Product: December 29th, 2016
Gene Model: December 21st, 2018
59 days agocki6 cyclin-dependent kinase inhibitor6:
4.07
GRMZM2G084570
Garza-Aguilar, SM et al. 2018. Plant Sci pp.doi: 10.1016/j.plantsci.2018.12.020     Reference: December 22nd, 2018
Gene Product: March 8th, 2017
Gene Model: March 7th, 2017
59 days agocyc10 cyclin10: Associates to cyclin dependent kinase proteins during germination and the complexes formed develop kinase activity.
 
GRMZM2G107377
Garza-Aguilar, SM et al. 2018. Plant Sci pp.doi: 10.1016/j.plantsci.2018.12.020     Reference: December 22nd, 2018
Gene Product: June 26th, 2009
Variation: December 21st, 2016
Gene Model: December 21st, 2016
59 days agocyc11 cyclin11: Associates to cyclin dependent kinase proteins during germination and the complexes formed develop kinase activity.
 
GRMZM2G161382
Garza-Aguilar, SM et al. 2018. Plant Sci pp.doi: 10.1016/j.plantsci.2018.12.020     Reference: December 22nd, 2018
Gene Product: June 26th, 2009
Gene Model: December 21st, 2016
59 days agocki2 cyclin-dependent kinase inhibitor2:
 
GRMZM2G037926
Garza-Aguilar, SM et al. 2018. Plant Sci pp.doi: 10.1016/j.plantsci.2018.12.020     Reference: December 22nd, 2018
Gene Product: March 8th, 2017
Variation: May 17th, 2017
Gene Model: March 7th, 2017
59 days agocki3 cyclin-dependent kinase inhibitor3:
 
GRMZM2G157510
Garza-Aguilar, SM et al. 2018. Plant Sci pp.doi: 10.1016/j.plantsci.2018.12.020     Reference: December 22nd, 2018
Gene Product: March 8th, 2017
Variation: May 4th, 2017
Gene Model: March 7th, 2017
59 days agocki4 cyclin-dependent kinase inhibitor4:
 
GRMZM2G358931
Garza-Aguilar, SM et al. 2018. Plant Sci pp.doi: 10.1016/j.plantsci.2018.12.020     Reference: December 22nd, 2018
Gene Product: March 8th, 2017
Variation: May 26th, 2017
Gene Model: March 7th, 2017
59 days agocki7 cyclin-dependent kinase inhibitor7:
 
GRMZM2G343769
Garza-Aguilar, SM et al. 2018. Plant Sci pp.doi: 10.1016/j.plantsci.2018.12.020     Reference: December 22nd, 2018
Gene Product: March 8th, 2017
Gene Model: March 7th, 2017
59 days agocki8 cyclin-dependent kinase inhibitor8:
 
GRMZM2G154414
Garza-Aguilar, SM et al. 2018. Plant Sci pp.doi: 10.1016/j.plantsci.2018.12.020     Reference: December 22nd, 2018
Gene Product: March 8th, 2017
Gene Model: March 7th, 2017
59 days agocyc15 cyclin15:
 
GRMZM2G006721
Garza-Aguilar, SM et al. 2018. Plant Sci pp.doi: 10.1016/j.plantsci.2018.12.020     Reference: December 22nd, 2018
Gene Product: June 26th, 2009
Gene Model: December 21st, 2018
59 days agocyc16 cyclin16:
 
GRMZM2G007130
Garza-Aguilar, SM et al. 2018. Plant Sci pp.doi: 10.1016/j.plantsci.2018.12.020     Reference: December 22nd, 2018
Gene Product: June 26th, 2009
Gene Model: December 21st, 2018
59 days agocki5 cyclin-dependent kinase inhibitor5:
5.07
GRMZM2G101613
Garza-Aguilar, SM et al. 2018. Plant Sci pp.doi: 10.1016/j.plantsci.2018.12.020     Reference: December 22nd, 2018
Gene Product: March 8th, 2017
Gene Model: March 7th, 2017
59 days agocdc1 cell division control protein homolog1:
4.10
GRMZM2G174596
Garza-Aguilar, SM et al. 2018. Plant Sci pp.doi: 10.1016/j.plantsci.2018.12.020     Reference: December 22nd, 2018
Gene Product: December 29th, 2016
Gene Model: December 21st, 2018
60 days agoppr27 pentatricopeptide repeat protein27:
 
GRMZM2G353195
Chen, L et al. 2018. BMC Plant Biology 18:366     Reference: December 21st, 2018
Gene Product: December 27th, 2016
Gene Model: December 21st, 2018
60 days agoppr360 pentatricopeptide repeat protein360:
 
GRMZM2G141202
Chen, L et al. 2018. BMC Plant Biology 18:366     Reference: December 21st, 2018
Gene Product: December 27th, 2016
Gene Model: December 21st, 2018
62 days agoufo1 unstable factor for orange1: dominant Ufo1 plants have orange color in anthers, silks, and most other plant parts in presence of P1-wr or P1-rr; growth retarded
10.03
GRMZM2G053177
Wittmeyer, KT et al. 2018. Plant Cell pp.doi: 10.1105/tpc.18.00546     Reference: December 19th, 2018
Variation: December 19th, 2018
Gene Model: December 19th, 2018
64 days agomyb40 myb transcription factor40: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
3.04
GRMZM2G051256
Meng, C; Sui, N. 2018. Plant Physiol Biochem 135:167-173     Reference: December 17th, 2018
Variation: February 18th, 2011
Gene Model: July 28th, 2016
64 days agobhlh10 bHLH-transcription factor 10: mutants affect root-hair length
 
   Wang, C-X et al. 2018. Plant J pp.doi: 10.1111/tpj.14200     Reference: December 17th, 2018
Gene Product: September 14th, 2016
Variation: December 17th, 2018
64 days agolrl3 ljrhl1-like3:
5.08
GRMZM5G832135
Hey, S et al. 2017. J Exp Bot pp.doi: 10.1093/jxb/erx104   AT5G58010 (TAIR) Reference: April 12th, 2017
Gene Product: September 14th, 2016
Gene Model: December 17th, 2018
66 days agoagpsl1 ADP glucose pyrophosphorylase small subunit leaf1: leaf-specific
1.07
GRMZM2G163437
Ning, P et al. 2018. Agronomy 8:302     Reference: December 15th, 2018
Gene Product: September 1st, 2003
Variation: April 3rd, 2011
Gene Model: June 15th, 2012
66 days agosps1 sucrose phosphate synthase1: cDNA encodes a 1068 amino acid leaf protein; transgenic (E. coli) directs sucrose phosphate synthesis
8.06
   Ning, P et al. 2018. Agronomy 8:302     Reference: December 15th, 2018
Gene Product: September 1st, 2003
Variation: January 15th, 2015
66 days agosus1 sucrose synthase1: (was sus2, css1) sucrose synthase-1 (SUS1) of embryo and other tissues, compare sh1; SSRs phi016, 032, 042
9.04
GRMZM2G152908
Ning, P et al. 2018. Agronomy 8:302     Reference: December 15th, 2018
Gene Product: October 25th, 2006
Variation: October 27th, 2014
Gene Model: August 12th, 2014
66 days agohak1 potassium high-affinity transporter1:
2.04
GRMZM2G093826
Qin, Y-J et al. 2018. J Integr Plant Biol pp.doi: 10.1111/jipb.12756     Reference: December 15th, 2018
Gene Product: December 15th, 2018
Gene Model: February 23rd, 2018
66 days agoagpll1 ADP glucose pyrophosphorylase large subunit leaf1AGPL4:
1.10
GRMZM2G391936
Ning, P et al. 2018. Agronomy 8:302     Reference: December 15th, 2018
Gene Product: January 3rd, 2014
Variation: September 22nd, 2017
Gene Model: September 22nd, 2017
66 days agotpt1 triose phosphate translocator1: cDNA sequence similar to plant triosephospate/phosphate translocators
 
   Ning, P et al. 2018. Agronomy 8:302     Reference: December 15th, 2018
Gene Product: September 1st, 2003
Variation: September 1st, 2003
66 days agosweet13b sugars will eventually be exported transporter13b:
 
GRMZM2G021706
Ning, P et al. 2018. Agronomy 8:302     Reference: December 15th, 2018
Gene Product: November 4th, 2015
Variation: February 17th, 2018
Gene Model: November 3rd, 2015
66 days agosweet13c sugars will eventually be exported transporter13c:
 
GRMZM2G179349
Ning, P et al. 2018. Agronomy 8:302     Reference: December 15th, 2018
Gene Product: November 4th, 2015
Variation: February 17th, 2018
Gene Model: November 3rd, 2015
66 days agocbl1 calcineurin B-like1:
 
GRMZM2G107575
Qin, Y-J et al. 2018. J Integr Plant Biol pp.doi: 10.1111/jipb.12756     Reference: December 15th, 2018
Gene Product: October 19th, 2016
Gene Model: October 19th, 2016
66 days agocbl9 calcineurin B-like9:
 
GRMZM2G015324
Qin, Y-J et al. 2018. J Integr Plant Biol pp.doi: 10.1111/jipb.12756     Reference: December 15th, 2018
Gene Product: October 19th, 2016
Gene Model: October 19th, 2016
66 days agohak5 potassium high-affinity transporter5: mutants exhibit reduced K uptake and inhibited seedling growth
 
GRMZM2G084779
Qin, Y-J et al. 2018. J Integr Plant Biol pp.doi: 10.1111/jipb.12756     Reference: December 15th, 2018
Gene Product: December 15th, 2018
Variation: December 15th, 2018
Gene Model: December 15th, 2018
66 days agomex1 maltose excess protein1:
 
GRMZM2G156356
Ning, P et al. 2018. Agronomy 8:302     Reference: December 15th, 2018
Gene Product: December 15th, 2018
Gene Model: December 15th, 2018
66 days agobmy3 beta-amylase3:
 
GRMZM2G347708
Ning, P et al. 2018. Agronomy 8:302     Reference: December 15th, 2018
Gene Product: September 1st, 2003
Gene Model: December 15th, 2018
66 days agocipk23 calcineurin B-like-interacting protein kinase3:
7.01
GRMZM2G013236
Qin, Y-J et al. 2018. J Integr Plant Biol pp.doi: 10.1111/jipb.12756     Reference: December 15th, 2018
Gene Product: August 25th, 2018
Gene Model: December 15th, 2018
66 days agosweet13a sugars will eventually be exported transporter13a:
10.03
GRMZM2G173669
Ning, P et al. 2018. Agronomy 8:302     Reference: December 15th, 2018
Gene Product: November 4th, 2015
Variation: February 17th, 2018
Gene Model: December 28th, 2017
66 days agoss1 starch synthase I: single copy endosperm specific cDNA; encoded-protein cross-reacts with antibody to granule associated starch synthase I
9.02
   Ning, P et al. 2018. Agronomy 8:302     Reference: December 15th, 2018
Gene Product: October 14th, 2016
Variation: October 7th, 2010
66 days agosus2 sucrose synthase2: Encodes sucrose synthase-2 (SUS2), one of 3 loci defined for this function; compare sh1 and sus1.
1.04
GRMZM2G318780
Ning, P et al. 2018. Agronomy 8:302     Reference: December 15th, 2018
Gene Product: October 25th, 2006
Variation: September 25th, 2014
Gene Model: August 3rd, 2013
67 days agoumc1159  : candidate gene for kernel size (Peng et al., 2018)
7.01
GRMZM2G144726
Pang, JL et al. 2018. Plant J pp.doi: 10.1111/tpj.14193     Reference: December 14th, 2018
Variation: September 1st, 2003
Gene Model: September 4th, 2018
67 days agobhlh175 bHLH-transcription factor 175: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Pang, JL et al. 2018. Plant J pp.doi: 10.1111/tpj.14193   AT3G26744 (TAIR) Reference: December 14th, 2018
Gene Product: September 14th, 2016
67 days agozag2 Zea AGAMOUS homolog2: amino acid sequence, deduced from cDNA sequence, has 49% identity to Arabidopsis, floral homeotic gene product; expression restricted to female inflorescence; near ts4
3.05 - 3.05
   Pang, JL et al. 2018. Plant J pp.doi: 10.1111/tpj.14193     Reference: December 14th, 2018
Gene Product: April 1st, 2011
Variation: October 22nd, 2014
68 days agopzb01111  :
10.04
       Variation: December 13th, 2018
68 days agoumc1045  : NCBI: probable serine/threonine-protein kinase PIX13
10.05
GRMZM2G142832
Matz, EC et al. 1992. MNL 66:107     Reference: September 1st, 2003
Variation: December 13th, 2018
Gene Model: April 25th, 2017
71 days agoarpg1 acid phosphatase-regulating gene1: 082 mutant confers a P-efficient ability to plant. Overexpression of the gene significantly increased acid phosphatase activity and Pi concentration in maize leaves.
 
GRMZM2G041022
Yu, TT et al. 2018. Theor Appl Genet pp.doI: 10.1007/s00122-018-3257-5     Reference: December 10th, 2018
Variation: December 10th, 2018
Gene Model: December 10th, 2018
73 days agocptk1 chloroplast thymidine kinase1: Mutants have aberrant chloroplast DNA metabolism. Alice Barkan, 2011
 
GRMZM2G048821
Le Ret, M et al. 2018. Plant Physiol 178:1643-1656     Reference: December 8th, 2018
Variation: October 11th, 2018
Gene Model: September 6th, 2011
73 days agoemp12 empty pericarp12: mutant severely arrests embryo and endosperm development, causing embryo lethality
 
GRMZM2G023071
Sun, F et al. 2018. J Exp Bot pp.doi: 10.1093/jxb/ery432     Reference: December 8th, 2018
Gene Product: December 27th, 2016
Variation: December 8th, 2018
Gene Model: December 8th, 2018
74 days agolrs1 liguleless related sequence1: bzip90 locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
8.07
AC232238.2_FG004
Dzievit, MJ et al. 2018. Plant Genome pp.doi: 10.3835/plantgenome2018.05.0024     Reference: December 7th, 2018
Gene Product: August 21st, 2018
Variation: August 22nd, 2014
Gene Model: August 22nd, 2014
Recommended by Ed Coe:
January 8th, 2008
74 days agoos1 opaque-endosperm, small germ1: opaque crown; kernel larger, lighter color; viable; reduced oil content
2.00 - 2.04
   Song, WB et al. 2018. J Integr Plant Biol pp.doi: 10.1111/jipb.12755     Reference: December 7th, 2018
Gene Product: June 15th, 2018
Variation: December 6th, 2018
74 days agomrp1 Myb related protein1: transforms aleurone cells into endosperm transfer cells and required to maintain transfer cell phenotype
8.05
   Song, WB et al. 2018. J Integr Plant Biol pp.doi: 10.1111/jipb.12755     Reference: December 7th, 2018
Gene Product: September 1st, 2003
Variation: September 1st, 2003
74 days agopmk1 Phosphomevalonate kinase1:
1.03
GRMZM2G019260
Dzievit, MJ et al. 2018. Plant Genome pp.doi: 10.3835/plantgenome2018.05.0024     Reference: December 7th, 2018
Variation: March 9th, 2016
Gene Model: September 20th, 2016
74 days agodrl2 drooping leaf2: mutant enhances the phenotype of ifa1 mutants (a.k.a. drl1)
9.06
GRMZM2G102218
Dzievit, MJ et al. 2018. Plant Genome pp.doi: 10.3835/plantgenome2018.05.0024   AT1G69180 (TAIR)
LOC_Os03g11600 (MSU/TIGR)
Reference: December 7th, 2018
Gene Product: October 16th, 2015
Variation: July 12th, 2017
Gene Model: October 16th, 2015
74 days agoifa1 indeterminate floral apex1: mutants have perturbed floral and inflorescence meristems as well as droopy leaves with increased angle
 
GRMZM2G088309
Dzievit, MJ et al. 2018. Plant Genome pp.doi: 10.3835/plantgenome2018.05.0024   AT1G69180 (TAIR)
LOC_Os03g11600 (MSU/TIGR)
Reference: December 7th, 2018
Gene Product: October 16th, 2015
Variation: July 13th, 2017
Gene Model: October 16th, 2015
74 days agobrs1 brassinosteroid synthesis1:
1.03
GRMZM2G065635
Dzievit, MJ et al. 2018. Plant Genome pp.doi: 10.3835/plantgenome2018.05.0024   AT3G50660 (TAIR) Reference: December 7th, 2018
Gene Product: September 20th, 2010
Variation: November 7th, 2013
Gene Model: October 3rd, 2012
77 days agoms33 male sterile33:
2.09
GRMZM2G070304
Zhang, L et al. 2018. BMC Plant Biology pp.doi: 10.1186/s12870-018-1543-7   LOC_Os11g45400 (MSU/TIGR) Reference: December 4th, 2018
Gene Product: March 17th, 2018
Variation: December 4th, 2018
Gene Model: March 17th, 2018
79 days agogshs2 glutathione synthetase2:
3.05
GRMZM2G155974
Xia, ZL et al. 2018. Frontiers Plant Sci 9:1680     Reference: December 1st, 2018
Gene Product: December 2nd, 2018
Variation: September 25th, 2007
Gene Model: December 1st, 2018
79 days agogshs1 glutathione synthetase1:
 
GRMZM2G437004
Xia, ZL et al. 2018. Frontiers Plant Sci 9:1680     Reference: December 1st, 2018
Gene Product: December 2nd, 2018
Gene Model: December 1st, 2018
80 days agogt1 grassy tillers1: numerous basal branches; vegetatively totipotent in combination with id1 and factors for perennialismputative transcription factor that reduces branching, and is induced by shade
1.04
GRMZM2G005624
Dong, ZB et al. 2018. Trends Genet pp.doi: 10.1016/j.tig.2018.10.007     Reference: December 1st, 2018
Gene Product: March 5th, 2012
Variation: August 18th, 2011
Gene Model: March 5th, 2012
80 days agotb1 teosinte branched1: many tillers; ear branches tassel-like; affects apical dominanceGRASSIUS: TCP transcription factor (TCP1)
1.09
   Dong, ZB et al. 2018. Trends Genet pp.doi: 10.1016/j.tig.2018.10.007     Reference: December 1st, 2018
Gene Product: September 14th, 2016
Variation: February 2nd, 2017
80 days agosfp1 sulfate permease1:
1.02
GRMZM2G159632
Xia, ZL et al. 2018. Frontiers Plant Sci 9:1680     Reference: December 1st, 2018
Gene Product: April 20th, 2018
Gene Model: February 3rd, 2015
80 days agoso1 sulfite oxidase1:
1.06
GRMZM2G114739
Xia, ZL et al. 2018. Frontiers Plant Sci 9:1680     Reference: December 1st, 2018
Gene Product: April 16th, 2013
Gene Model: April 16th, 2013
80 days agoaprl2 adenosine 5'-phosphosulfate reductase-like2:
2.07
GRMZM2G087254
Xia, ZL et al. 2018. Frontiers Plant Sci 9:1680     Reference: December 1st, 2018
Gene Product: October 10th, 2017
Variation: December 23rd, 2015
Gene Model: December 18th, 2015
80 days agosfp4 sulfate transporter4:
 
GRMZM2G154211
Xia, ZL et al. 2018. Frontiers Plant Sci 9:1680     Reference: December 1st, 2018
Gene Product: April 20th, 2018
Gene Model: November 13th, 2017
80 days agocys3 cysteine synthase3:
 
GRMZM2G003289
Xia, ZL et al. 2018. Frontiers Plant Sci 9:1680     Reference: December 1st, 2018
Gene Product: September 1st, 2003
Gene Model: December 1st, 2018
80 days agosqd1 sulfolipid biosynthesis1:
 
GRMZM2G053322
Xia, ZL et al. 2018. Frontiers Plant Sci 9:1680     Reference: December 1st, 2018
Gene Product: December 1st, 2018
Gene Model: December 1st, 2018
80 days agocys4 cysteine synthase4:
 
GRMZM2G003289
    Gene Product: September 1st, 2003
Gene Model: December 1st, 2018
80 days agocys5 cysteine synthase5:
 
GRMZM2G443985
    Gene Product: September 1st, 2003
Gene Model: December 1st, 2018
80 days agocys7 cysteine synthase7:
 
GRMZM2G104237
    Gene Product: September 1st, 2003
Gene Model: December 1st, 2018
80 days agocys6 cysteine synthase6:
9.02
GRMZM2G104269
    Gene Product: September 1st, 2003
Gene Model: December 1st, 2018
80 days agosir1 sulfite reductase1:
 
GRMZM2G090338
Xia, ZL et al. 2018. Frontiers Plant Sci 9:1680     Reference: December 1st, 2018
Gene Product: September 1st, 2003
Variation: January 26th, 2011
Gene Model: July 28th, 2016
81 days agobx4 benzoxazinone synthesis4: endoplasmic reticulum P450 monoxygenase; synthesis of cyclic hydroxamates/DIMBOA; insect resistance in young seedlings; NAM SNP PHM1184
4.01
GRMZM2G172491
Huang, HL et al. 2018. Science of The Total Environment doi: 10.1016/j.scitotenv.2018.11.351     Reference: November 30th, 2018
Gene Product: October 24th, 2011
Variation: October 27th, 2011
Gene Model: October 24th, 2011
81 days agopbf1 prolamin-box binding factor1: endosperm cDNA, SSR umc1065
2.06
   Jin, X et al. 2018. New Phytol pp.doi: 10.1111/nph.15614     Reference: November 30th, 2018
Gene Product: September 1st, 2003
Variation: April 20th, 2005
81 days agobx5 benzoxazinone synthesis5: endoplasmic reticulum monoxygenase; synthesis of cyclic hydroxamates/DIMBOA; insect resistance in young seedlings; SSR umc1276.
4.01
GRMZM2G063756
Huang, HL et al. 2018. Science of The Total Environment doi: 10.1016/j.scitotenv.2018.11.351     Reference: November 30th, 2018
Gene Product: October 24th, 2011
Variation: October 27th, 2011
Gene Model: October 24th, 2011
81 days agobx2 benzoxazinone synthesis2: endoplasmic reticulum P450 monoxygenase; synthesis cyclic hyroxamates/DIMBOA; insect resistance in young seedlings; SSR umc1164, umc1682
4.01
GRMZM2G085661
Huang, HL et al. 2018. Science of The Total Environment doi: 10.1016/j.scitotenv.2018.11.351     Reference: November 30th, 2018
Gene Product: April 8th, 2013
Variation: October 27th, 2011
Gene Model: October 24th, 2011
81 days agohyd3 hydroxylase3: beta-carotene hydroxylase
 
GRMZM2G152135
Jin, X et al. 2018. New Phytol pp.doi: 10.1111/nph.15614     Reference: November 30th, 2018
Gene Product: December 13th, 2011
Variation: September 3rd, 2011
Gene Model: April 9th, 2013
81 days agocyp13 cytochrome P450 13: encodes CYP97A
 
GRMZM5G837869
Huang, HL et al. 2018. Science of The Total Environment doi: 10.1016/j.scitotenv.2018.11.351     Reference: November 30th, 2018
Gene Product: April 8th, 2013
Variation: July 8th, 2017
Gene Model: April 8th, 2013
81 days agocyp26 cytochrome P-450 26:
 
GRMZM2G087875
Huang, HL et al. 2018. Science of The Total Environment doi: 10.1016/j.scitotenv.2018.11.351     Reference: November 30th, 2018
Gene Product: February 26th, 2018
Gene Model: November 30th, 2018
81 days agocyp12 cytochrome P450 12:
2.06
GRMZM2G091588
Huang, HL et al. 2018. Science of The Total Environment doi: 10.1016/j.scitotenv.2018.11.351     Reference: November 30th, 2018
Gene Product: September 26th, 2016
Variation: January 22nd, 2010
Gene Model: April 30th, 2013
82 days agoatp10 ATP synthase10: specifically lacks the plastid ATP synthase; mutants block translation of atpB (cp)and atpA (cp)
 
   Zoschke, R et al. 2013. Plant Cell 25:2265-2275     Reference: February 17th, 2015
Variation: November 29th, 2018
84 days agoatg12 autophagy12: Mutants are phenotypically normal and fertile when grown under nutrient-rich conditions. However, when nitrogen-starved, seedling growth is severely arrested, and as the plants mature, they show enhanced leaf senescence and stunted ear development.
 
GRMZM5G842517
McLoughlin, F et al. 2018. Nature Plants pp.doi: 10.1038/s41477-018-0299-2     Reference: November 27th, 2018
Variation: August 15th, 2017
Gene Model: August 15th, 2017
85 days agofl1 floury endosperm1: (was o4) endosperm opaque, soft; dosage effect with fl1-ref allele, but o4 allele is recessive
2.04
GRMZM2G094532
Vanous, A et al. 2018. Plant Genome 12:170114     Reference: November 26th, 2018
Gene Product: July 8th, 2013
Variation: September 16th, 2010
Gene Model: July 8th, 2013
85 days agoo10 opaque endosperm10: like o1
 
GRMZM2G346263
Vanous, A et al. 2018. Plant Genome 12:170114     Reference: November 26th, 2018
Gene Product: August 20th, 2016
Variation: August 20th, 2016
Gene Model: August 20th, 2016
85 days agoemp16 empty pericarp16: mutant homozyous kernels have empty pericarp and are non-viable.
 
GRMZM2G060516
Vanous, A et al. 2018. Plant Genome 12:170114     Reference: November 26th, 2018
Gene Product: December 27th, 2016
Variation: January 16th, 2016
Gene Model: January 16th, 2016
88 days agosu1 sugary1: endosperm wrinkled and translucent when dry; starch debranching enzyme I absent in developing endosperm, phytoglycogen but no debranching enzyme in germinating seeds; su1-am sugary-amylaceous; su1-st recessive starchy; application: the "sweet corn" gene - recessive kernels are creamy-sweet at milk stage
4.05
   Baseggio, M et al. 2018. Plant Genome pp.doi:10.3835/plantgenome2018.06.0038     Reference: November 23rd, 2018
Gene Product: April 21st, 2016
Variation: June 6th, 2016
88 days agohggt1 homogentisate geranylgeranyl transferase1: vitamin E synthesis; contributes to variation in levels of tocotrienol (Lipka et al 2013)member of the ubiquitinA (UbiA) prenyltransferase domain containing gene family (Hunter et al., 2018)
 
GRMZM2G173358
Baseggio, M et al. 2018. Plant Genome pp.doi:10.3835/plantgenome2018.06.0038     Reference: November 23rd, 2018
Gene Product: January 8th, 2018
Gene Model: June 26th, 2013
88 days agosxd1 sucrose export defective1: vitamin E synthesis; anthocyanin accumulates in a non-clonal pattern at tip and margins of leaves soon after emergence from whorl; reduced plant height
5.04
   Baseggio, M et al. 2018. Plant Genome pp.doi:10.3835/plantgenome2018.06.0038     Reference: November 23rd, 2018
Gene Product: December 1st, 2012
Variation: August 7th, 2012
88 days agopap19 purple acid phosphatase19: encodes a metalloenzyme that hydrolyzes phosphate esters and anhydrides under acidic conditions.
1.03
GRMZM2G152447
Gonzalez Munoz, E et al. 2015. Frontiers Plant Sci 6:341     Reference: November 21st, 2018
Gene Product: November 21st, 2018
Gene Model: November 23rd, 2018
88 days agopap20 purple acid phosphatase20: encodes a metalloenzyme that hydrolyzes phosphate esters and anhydrides under acidic conditions.
1.03
GRMZM2G152477
Gonzalez Munoz, E et al. 2015. Frontiers Plant Sci 6:341     Reference: November 21st, 2018
Gene Product: November 21st, 2018
Gene Model: November 23rd, 2018
88 days agopap22 purple acid phosphatase22: encodes a metalloenzyme that hydrolyzes phosphate esters and anhydrides under acidic conditions.
1.08
GRMZM2G174549
Gonzalez Munoz, E et al. 2015. Frontiers Plant Sci 6:341     Reference: November 21st, 2018
Gene Product: November 21st, 2018
Gene Model: November 23rd, 2018
88 days agopap31 purple acid phosphatase31: encodes a metalloenzyme that hydrolyzes phosphate esters and anhydrides under acidic conditions.
2.07
GRMZM5G868679
Gonzalez Munoz, E et al. 2015. Frontiers Plant Sci 6:341     Reference: November 21st, 2018
Gene Product: November 21st, 2018
Gene Model: November 23rd, 2018
88 days agoelm2 elongated mesocotyl2: mutant like elm1; encodes heme oxygenase
 
GRMZM2G101004
Zhang, H et al. 2018. Frontiers Plant Sci pp.doi: 10.3389/fpls.2018.01520     Reference: November 23rd, 2018
Gene Product: September 24th, 2014
Variation: September 24th, 2014
Gene Model: November 18th, 2013
88 days agopap4 purple acid phosphatase4: encodes a metalloenzyme that hydrolyzes phosphate esters and anhydrides under acidic conditions.
 
AC202435.3_FG003
Gonzalez Munoz, E et al. 2015. Frontiers Plant Sci 6:341     Reference: November 21st, 2018
Gene Product: November 21st, 2018
Gene Model: November 23rd, 2018
88 days agopap5 purple acid phosphatase5: encodes a metalloenzyme that hydrolyzes phosphate esters and anhydrides under acidic conditions.
 
AC207043.3_FG004
Gonzalez Munoz, E et al. 2015. Frontiers Plant Sci 6:341     Reference: November 21st, 2018
Gene Product: November 21st, 2018
Gene Model: November 23rd, 2018
88 days agopap6 purple acid phosphatase6: encodes a metalloenzyme that hydrolyzes phosphate esters and anhydrides under acidic conditions.
 
GRMZM2G007754
Gonzalez Munoz, E et al. 2015. Frontiers Plant Sci 6:341     Reference: November 21st, 2018
Gene Product: November 21st, 2018
Gene Model: November 23rd, 2018
88 days agopap7 purple acid phosphatase7: encodes a metalloenzyme that hydrolyzes phosphate esters and anhydrides under acidic conditions.
 
GRMZM2G073860
Gonzalez Munoz, E et al. 2015. Frontiers Plant Sci 6:341     Reference: November 21st, 2018
Gene Product: November 21st, 2018
Gene Model: November 23rd, 2018
88 days agopap8 purple acid phosphatase8: encodes a metalloenzyme that hydrolyzes phosphate esters and anhydrides under acidic conditions.
 
GRMZM2G077466
Gonzalez Munoz, E et al. 2015. Frontiers Plant Sci 6:341     Reference: November 21st, 2018
Gene Product: November 21st, 2018
Gene Model: November 23rd, 2018
88 days agopap9 purple acid phosphatase9: encodes a metalloenzyme that hydrolyzes phosphate esters and anhydrides under acidic conditions.
 
GRMZM2G096363
Gonzalez Munoz, E et al. 2015. Frontiers Plant Sci 6:341     Reference: November 21st, 2018
Gene Product: November 21st, 2018
Gene Model: November 23rd, 2018
88 days agopap10 purple acid phosphatase10: encodes a metalloenzyme that hydrolyzes phosphate esters and anhydrides under acidic conditions.
 
GRMZM5G826216
Gonzalez Munoz, E et al. 2015. Frontiers Plant Sci 6:341     Reference: November 21st, 2018
Gene Product: November 21st, 2018
Gene Model: November 23rd, 2018
88 days agopap11 purple acid phosphatase11: encodes a metalloenzyme that hydrolyzes phosphate esters and anhydrides under acidic conditions.
 
GRMZM2G106600
Gonzalez Munoz, E et al. 2015. Frontiers Plant Sci 6:341     Reference: November 21st, 2018
Gene Product: November 21st, 2018
Gene Model: November 23rd, 2018
88 days agopap12 purple acid phosphatase12: encodes a metalloenzyme that hydrolyzes phosphate esters and anhydrides under acidic conditions.
 
GRMZM2G109071
Gonzalez Munoz, E et al. 2015. Frontiers Plant Sci 6:341     Reference: November 21st, 2018
Gene Product: November 21st, 2018
Gene Model: November 23rd, 2018
88 days agopap14 purple acid phosphatase14: encodes a metalloenzyme that hydrolyzes phosphate esters and anhydrides under acidic conditions.
 
GRMZM2G111425
Gonzalez Munoz, E et al. 2015. Frontiers Plant Sci 6:341     Reference: November 21st, 2018
Gene Product: November 21st, 2018
Gene Model: November 23rd, 2018
88 days agopap16 purple acid phosphatase16: encodes a metalloenzyme that hydrolyzes phosphate esters and anhydrides under acidic conditions.
 
GRMZM2G138698
Gonzalez Munoz, E et al. 2015. Frontiers Plant Sci 6:341     Reference: November 21st, 2018
Gene Product: November 21st, 2018
Gene Model: November 23rd, 2018
88 days agopap17 purple acid phosphatase17: encodes a metalloenzyme that hydrolyzes phosphate esters and anhydrides under acidic conditions.
 
GRMZM2G138756
Gonzalez Munoz, E et al. 2015. Frontiers Plant Sci 6:341     Reference: November 21st, 2018
Gene Product: November 21st, 2018
Gene Model: November 23rd, 2018
88 days agopap18 purple acid phosphatase18: encodes a metalloenzyme that hydrolyzes phosphate esters and anhydrides under acidic conditions.
 
GRMZM2G141584
Gonzalez Munoz, E et al. 2015. Frontiers Plant Sci 6:341     Reference: November 21st, 2018
Gene Product: November 21st, 2018
Gene Model: November 23rd, 2018
88 days agopap21 purple acid phosphatase21: encodes a metalloenzyme that hydrolyzes phosphate esters and anhydrides under acidic conditions.
 
GRMZM2G157027
Gonzalez Munoz, E et al. 2015. Frontiers Plant Sci 6:341     Reference: November 21st, 2018
Gene Product: November 21st, 2018
Gene Model: November 23rd, 2018
88 days agopap24 purple acid phosphatase24: encodes a metalloenzyme that hydrolyzes phosphate esters and anhydrides under acidic conditions.
 
GRMZM2G326625
Gonzalez Munoz, E et al. 2015. Frontiers Plant Sci 6:341     Reference: November 21st, 2018
Gene Product: November 21st, 2018
Gene Model: November 23rd, 2018
88 days agopap26 purple acid phosphatase26: encodes a metalloenzyme that hydrolyzes phosphate esters and anhydrides under acidic conditions.
 
GRMZM2G366607
Gonzalez Munoz, E et al. 2015. Frontiers Plant Sci 6:341     Reference: November 21st, 2018
Gene Product: November 21st, 2018
Gene Model: November 23rd, 2018
88 days agopap27 purple acid phosphatase27: encodes a metalloenzyme that hydrolyzes phosphate esters and anhydrides under acidic conditions.
 
GRMZM2G386998
Gonzalez Munoz, E et al. 2015. Frontiers Plant Sci 6:341     Reference: November 21st, 2018
Gene Product: November 21st, 2018
Gene Model: November 23rd, 2018
88 days agopap29 purple acid phosphatase29: encodes a metalloenzyme that hydrolyzes phosphate esters and anhydrides under acidic conditions.
 
GRMZM2G434170
Gonzalez Munoz, E et al. 2015. Frontiers Plant Sci 6:341     Reference: November 21st, 2018
Gene Product: November 21st, 2018
Gene Model: November 23rd, 2018
88 days agopap30 purple acid phosphatase30: encodes a metalloenzyme that hydrolyzes phosphate esters and anhydrides under acidic conditions.
 
GRMZM5G831009
Gonzalez Munoz, E et al. 2015. Frontiers Plant Sci 6:341     Reference: November 21st, 2018
Gene Product: November 21st, 2018
Gene Model: November 23rd, 2018
88 days agopap32 purple acid phosphatase32: encodes a metalloenzyme that hydrolyzes phosphate esters and anhydrides under acidic conditions.
 
GRMZM5G881649
Gonzalez Munoz, E et al. 2015. Frontiers Plant Sci 6:341     Reference: November 21st, 2018
Gene Product: November 21st, 2018
Gene Model: November 23rd, 2018
88 days agovte4 vitamin E synthesis4:
5.06
GRMZM2G035213
Baseggio, M et al. 2018. Plant Genome pp.doi:10.3835/plantgenome2018.06.0038     Reference: November 23rd, 2018
Gene Product: June 26th, 2013
Gene Model: June 26th, 2013
88 days agopap13 purple acid phosphatase13: encodes a metalloenzyme that hydrolyzes phosphate esters and anhydrides under acidic conditions.
7.03
GRMZM2G109405
Gonzalez Munoz, E et al. 2015. Frontiers Plant Sci 6:341     Reference: November 21st, 2018
Gene Product: November 21st, 2018
Gene Model: November 23rd, 2018
90 days agoacp1 acid phosphatase1: electrophoretic mobility; cytosolic; dimericencodes a metalloenzyme that hydrolyzes phosphate esters and anhydrides under acidic conditions.
9.03
AC211394.4_FG004
Gonzalez Munoz, E et al. 2015. Frontiers Plant Sci 6:341     Reference: November 21st, 2018
Gene Product: September 1st, 2003
Variation: September 1st, 2003
Gene Model: July 27th, 2016
90 days agopap25 purple acid phosphatase25: encodes a metalloenzyme that hydrolyzes phosphate esters and anhydrides under acidic conditions.
 
   Gonzalez Munoz, E et al. 2015. Frontiers Plant Sci 6:341     Reference: November 21st, 2018
Gene Product: November 21st, 2018
90 days agopap28 purple acid phosphatase28: encodes a metalloenzyme that hydrolyzes phosphate esters and anhydrides under acidic conditions.
 
   Gonzalez Munoz, E et al. 2015. Frontiers Plant Sci 6:341     Reference: November 21st, 2018
Gene Product: November 21st, 2018
90 days agoumc2224  :
1.01
GRMZM2G076062
Gonzalez Munoz, E et al. 2015. Frontiers Plant Sci 6:341     Reference: November 21st, 2018
Variation: February 1st, 2017
Gene Model: April 28th, 2016
90 days agopap15 purple acid phosphatase15: similar to Arabidopsis purple acid phosphatase 27encodes a metalloenzyme that hydrolyzes phosphate esters and anhydrides under acidic conditions.
1.06
GRMZM2G136453
Gonzalez Munoz, E et al. 2015. Frontiers Plant Sci 6:341     Reference: November 21st, 2018
Gene Product: November 21st, 2018
Gene Model: June 21st, 2017
90 days agopht1 phosphate transporter protein1:
5.03
GRMZM2G326707
Sun, YL et al. 2018. Proteome Science 16:19     Reference: November 21st, 2018
Gene Product: June 16th, 2016
Variation: February 4th, 2011
Gene Model: May 27th, 2015
90 days agopht2 phosphate transporter protein2:
1.08
GRMZM2G154090
Sun, YL et al. 2018. Proteome Science 16:19     Reference: November 21st, 2018
Gene Product: June 16th, 2016
Variation: February 4th, 2011
Gene Model: May 27th, 2015
90 days agomecs2 methyl erythritol cyclodiphosphate synthase2:
 
AC209374.4_FG002
Gonzalez Munoz, E et al. 2015. Frontiers Plant Sci 6:341     Reference: November 21st, 2018
Gene Product: October 4th, 2014
Gene Model: October 4th, 2014
90 days agopht9 phosphate transporter protein9:
 
GRMZM2G070087
Sun, YL et al. 2018. Proteome Science 16:19     Reference: November 21st, 2018
Gene Product: June 16th, 2016
Gene Model: June 16th, 2016
90 days agonc1 Na+ content1: loss-of-function allele confers increased accumulation of Na+ in leaves, and salt hypersensitivity.
 
GRMZM2G047616
Li, PC et al. 2018. Planta pp.doi: 10.1007/s00425-018-3043-2     Reference: November 21st, 2018
Gene Product: November 15th, 2017
Variation: November 15th, 2017
Gene Model: November 15th, 2017
90 days agopap1 purple acid phosphatase1: encodes a metalloenzyme that hydrolyzes phosphate esters and anhydrides under acidic conditions.
 
GRMZM2G093101
Sun, YL et al. 2018. Proteome Science 16:19     Reference: November 21st, 2018
Gene Product: November 21st, 2018
Gene Model: November 21st, 2018
90 days agopap23 purple acid phosphatase23: encodes a metalloenzyme that hydrolyzes phosphate esters and anhydrides under acidic conditions.
 
GRMZM2G315848
Gonzalez Munoz, E et al. 2015. Frontiers Plant Sci 6:341     Reference: November 21st, 2018
Gene Product: November 21st, 2018
Gene Model: November 21st, 2018
90 days agospx1 SPX domain-containing membrane protein1: involved in Pi transport from roots to shoots
 
GRMZM2G166976
Sun, YL et al. 2018. Proteome Science 16:19     Reference: November 21st, 2018
Gene Product: November 21st, 2018
Gene Model: November 21st, 2018
90 days agopap2 purple acid phosphatase2: encodes a metalloenzyme that hydrolyzes phosphate esters and anhydrides under acidic conditions.
 
GRMZM2G134054
Dionisio, G et al. 2011. Plant Physiol 156:1087-110     Reference: November 21st, 2018
Gene Product: November 21st, 2018
Gene Model: November 21st, 2018
90 days agopap3 purple acid phosphatase3: encodes a metalloenzyme that hydrolyzes phosphate esters and anhydrides under acidic conditions.
 
GRMZM2G014193
Dionisio, G et al. 2011. Plant Physiol 156:1087-110     Reference: November 21st, 2018
Gene Product: November 21st, 2018
Gene Model: November 21st, 2018
91 days agoad1 adherent1: seedling leaves, tassel branches, and occasionally top leaves adhere
1.08
   Kempton, JH. 1921. USDA Bull 925:1-28     Reference: September 1st, 2003
Variation: November 20th, 2018
91 days agobz1 bronze1: modifies purple aleurone and plant color to pale or reddish brown; anthers yellow-fluorescent; allele bz1-m4 = sh1-bz1-m4; SSR phi017NCBI: UDPG-flavonoid 3-oxy glucosyl transferase
9.02
   Li, Y-J et al. 2018. Ann Bot pp.doi: 10.1093/aob/mcy123     Reference: July 4th, 2018
Gene Product: July 4th, 2018
Variation: November 20th, 2018
3 months agosh6 shrunken pale green6: shrunken, opaque, normal size kernel, like sh1; pale green virescent seedling that greens slowly and is usually lethal
7.00 - 7.02
   Neuffer, MG. 1992. MNL 66:39     Reference: September 1st, 2003
Variation: November 19th, 2018
3 months agoeps1 enolpyruvylshikimate phosphate synthase1: unpubl sequence
9.07
GRMZM5G877500
Dong, YX et al. 2018. J Biol Chem pp.doi: 10.1074/jbc.RA118.006134     Reference: November 15th, 2018
Gene Product: September 1st, 2003
Variation: November 15th, 2018
Gene Model: July 27th, 2016
3 months agodek19 defective kernel19: collapsed opaque endosperm; lethal; cultured embryos green
6.01 - 6.08
GRMZM2G111984
Dong, JQ et al. 2018. Plant J pp.doi: 10.1111/tpj.14153     Reference: November 13th, 2018
Gene Product: December 27th, 2016
Variation: November 13th, 2018
Gene Model: November 13th, 2018
3 months agodek33 defective kernel33: opaque, floury, dented, wrinkled kernel with floury endosperm; occasionally viviparous
5.04 - 5.05
GRMZM2G090068
Dong, JQ et al. 2018. Plant J pp.doi: 10.1111/tpj.14153     Reference: November 13th, 2018
Gene Product: November 13th, 2018
Variation: November 13th, 2018
Gene Model: November 13th, 2018
3 months agomet2 DNA methyl transferase2:
10.06
GRMZM2G025592
Stoddard, CI et al. 2018. Mol Cell pp.doi: 10.1016/j.molcel.2018.10.006     Reference: November 13th, 2018
Gene Product: April 6th, 2018
Variation: November 13th, 2018
Gene Model: November 16th, 2011
3 months agoplt1 phospholipid transfer protein homolog1: amino acid sequence, deduced from coleoptile cDNA, homologous to phospholipid transfer proteins
3.06
GRMZM2G101958
Jones, T et al. 2018. Methods in Molecular Biology 1864:81-93     Reference: November 12th, 2018
Gene Product: September 1st, 2003
Variation: March 17th, 2015
Gene Model: March 12th, 2015
3 months agoein2 ethylene insensitive 2: elevated expression co-segregated with a decreased smilaside A : smiglaside C ratio, which is important for maize seedling root defense against Fusarium graminearum
3.01
GRMZM2G068217
Zhou, S et al. 2018. New Phytol pp.doi: 10.1111/nph.15520   AT5G03280 (TAIR) Reference: November 12th, 2018
Variation: November 12th, 2018
Gene Model: March 1st, 2015
3 months agod8 dwarf plant8: Dominant D8 plants resemble d1; extreme alleles not responsive to gibberellins.
1.09
GRMZM2G144744
Schaefer, RJ et al. 2018. Plant Cell pp.doi: 10.1105/tpc.18.00299     Reference: November 10th, 2018
Gene Product: February 12th, 2007
Variation: August 29th, 2007
Gene Model: May 11th, 2011
3 months agod9 dwarf plant9: dominant D9 plants semidwarf with broad, dark green leaves; andromonoecious, not responsive to gibberellins; possible duplicate locus of d8
5.01
   Schaefer, RJ et al. 2018. Plant Cell pp.doi: 10.1105/tpc.18.00299     Reference: November 10th, 2018
Gene Product: February 12th, 2007
Variation: January 30th, 2014
3 months agoppp1 pyrophosphate-energized proton pump1: endosperm and leaf cDNA's 5C02E08 (uaz280),csu220; single copy; similar to plant vacuolar pyrophosphate-energized ATPase
5.07
   Schaefer, RJ et al. 2018. Plant Cell pp.doi: 10.1105/tpc.18.00299     Reference: November 10th, 2018
Gene Product: September 1st, 2003
Variation: December 14th, 2014
3 months agochr113 chromatin complex subunit A:
9.02
GRMZM2G409865
    Variation: September 1st, 2003
Gene Model: November 10th, 2018
3 months agochr119 chromatin complex subunit A 119: phd31 locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
2.07
GRMZM2G181158
Yilmaz, A et al. 2009. Plant Physiol 149:171-180     Reference: May 12th, 2011
Variation: September 1st, 2003
Gene Model: November 10th, 2018
3 months agochr118 chromatin complex subunit A:
6.07
GRMZM2G168096
    Variation: September 1st, 2003
Gene Model: November 10th, 2018
3 months agochr125a chromatin complex subunit A 125a:
9.04
GRMZM2G007922
    Variation: September 1st, 2003
Gene Model: November 10th, 2018
3 months agochr125b chromatin complex subunit A:
1.04
GRMZM2G469162
    Variation: September 1st, 2003
Gene Model: November 10th, 2018
3 months agochr126a chromatin complex subunit A 126a:
8.03
AC235535.1_FG001
    Variation: September 1st, 2003
Gene Model: November 10th, 2018
3 months agochr126b chromatin complex subunit A 126b:
3.04
GRMZM2G015277
    Variation: September 1st, 2003
Gene Model: November 10th, 2018
3 months agocpps3 copalyl diphosphate synthase3: Functions as a (+)-CPP synthase
 
GRMZM2G068808
Murphy, KM et al. 2018. Frontiers Plant Sci pp.doi: 10.3389/fpls.2018.01542     Reference: November 10th, 2018
Gene Product: August 16th, 2012
Gene Model: October 27th, 2014
3 months agocpps4 copalyl diphosphate synthase4: Produces 8,13-CPP and LPP; moderately inducible expression under root exposure to abiotic stress
 
AC218998.2_FG011
Murphy, KM et al. 2018. Frontiers Plant Sci pp.doi: 10.3389/fpls.2018.01542     Reference: November 10th, 2018
Gene Product: August 16th, 2012
Gene Model: November 9th, 2018
3 months agochr109a chromatin complex subunit A: alf6 locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
10.03
GRMZM2G115424
Zhou, W et al. 2016. Genes Genom pp.DOI: 10.1007/s13258-016-0491-6     Reference: November 16th, 2016
Variation: September 1st, 2003
Gene Model: November 9th, 2018
3 months agochr12 chromatin complex subunit A 12:
2.08
GRMZM2G102625
Stroud, LK; McGinnis, K. 2017. Plant Direct. DOI: 10.1002/pld3.19     Reference: October 21st, 2017
Variation: September 1st, 2003
Gene Model: November 9th, 2018
3 months agoaat1 anthocyanin acyltransferase1: mutants exhibit reduced anthocyanin acylation
 
GRMZM2G387394
Paulsmeyer, MN et al. 2018. G3 8:3669-3678     Reference: November 7th, 2018
Gene Product: September 28th, 2018
Variation: October 1st, 2018
Gene Model: September 28th, 2018
3 months agochr101 chromatin complex subunit A 101: chr101/chr106 double mutant caused embryo lethality with abnormalities in cell proliferation from the early stage of kernel development.
2.10
   Long, J-C et al. 2018. J Integr Plant Biol pp.doi: 10.1111/jipb.12733     Reference: November 4th, 2018
Variation: June 9th, 2018
3 months agochr106 chromatin complex subunit A 106: chr101/chr106 double mutant caused embryo lethality with abnormalities in cell proliferation from the early stage of kernel development.
1.10
GRMZM2G071025
Long, J-C et al. 2018. J Integr Plant Biol pp.doi: 10.1111/jipb.12733     Reference: November 4th, 2018
Variation: June 9th, 2018
Gene Model: December 22nd, 2014
3 months agocoi1 coronatine insensitive1: jasmonate signal receptor gene family member
3.06
GRMZM2G125411
An, LK et al. 2018. J Plant Growth Reg pp.doi: 10.1007/s00344-018-9863-2     Reference: November 2nd, 2018
Gene Product: November 2nd, 2018
Gene Model: November 2nd, 2018
3 months agocoi2 coronatine insensitive2: jasmonate signal receptor gene family member
 
GRMZM2G151536
An, LK et al. 2018. J Plant Growth Reg pp.doi: 10.1007/s00344-018-9863-2     Reference: November 2nd, 2018
Gene Product: November 2nd, 2018
Gene Model: November 2nd, 2018
3 months agocoi3 coronatine insensitive3: jasmonate signal receptor gene family member
 
GRMZM2G353209
An, LK et al. 2018. J Plant Growth Reg pp.doi: 10.1007/s00344-018-9863-2     Reference: November 2nd, 2018
Gene Product: November 2nd, 2018
Gene Model: November 2nd, 2018
3 months agocoi4 coronatine insensitive4: does not transgenically restore male fertility and defense response in Arabidopsis mutant coi1-1
 
GRMZM2G079112
An, LK et al. 2018. J Plant Growth Reg pp.doi: 10.1007/s00344-018-9863-2     Reference: November 2nd, 2018
Gene Product: November 2nd, 2018
Gene Model: November 2nd, 2018
3 months agogl4 glossy4: (was gl16) like gl1, but surface wax has reduced number of star-type particles
4.06
GRMZM2G003501
Liu, S et al. 2009. Genetics 183:1215-1225     Reference: November 1st, 2018
Gene Product: November 1st, 2018
Variation: November 1st, 2018
Gene Model: October 31st, 2018
3 months agogl4b 3-ketoacyl-CoA synthase gl4b: predicted to encode a 480-amino-acid protein; exhibits 96% identity with gl4a
 
GRMZM2G478140
Liu, S et al. 2009. Genetics 183:1215-1225     Reference: November 1st, 2018
Gene Product: November 1st, 2018
Gene Model: November 1st, 2018
3 months agogl14 glossy14: like gl1; expressed late (gl24 allelic)
2.05 - 2.05
GRMZM5G806387
Zheng, J et al. 2018. Plant J pp.doi: 10.1111/tpj.14140     Reference: October 31st, 2018
Gene Product: October 31st, 2018
Variation: October 31st, 2018
Gene Model: October 31st, 2018
3 months agogl26 glossy26: like gl1similar to Arabidopsis enoyl reductase
8.02
GRMZM2G481843
Zheng, J et al. 2018. Plant J pp.doi: 10.1111/tpj.14140     Reference: October 31st, 2018
Gene Product: October 31st, 2018
Variation: October 31st, 2018
Gene Model: September 17th, 2018
3 months agocer8 eceriferum8: mutant seedlings displayed a typical glossy phenotype
10.03
GRMZM2G101875
Zheng, J et al. 2018. Plant J pp.doi: 10.1111/tpj.14140   AT2G47240 (TAIR) Reference: October 31st, 2018
Gene Product: October 31st, 2018
Variation: October 31st, 2018
Gene Model: January 23rd, 2018
3 months agoarftf9 ARF-transcription factor 9: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
3.04
   Galli, M et al. 2018. Nature communications 9:4526     Reference: October 30th, 2018
Variation: September 25th, 2007
3 months agoarftf25 ARF-transcription factor 25: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
8.06
GRMZM2G116557
Galli, M et al. 2018. Nature communications 9:4526     Reference: October 30th, 2018
Variation: August 22nd, 2017
Gene Model: August 22nd, 2017
3 months agoarftf18 ARF-transcription factor 18: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
5.03
GRMZM2G035405
Galli, M et al. 2018. Nature communications 9:4526     Reference: October 30th, 2018
Variation: September 1st, 2003
Gene Model: June 23rd, 2018
3 months agoarftf23 ARF-transcription factor 23: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Galli, M et al. 2018. Nature communications 9:4526     Reference: October 30th, 2018
Variation: July 7th, 2017
3 months agonc2 Na+ content2:
 
GRMZM2G135674
Jiang, ZL et al. 2018. Frontiers Plant Sci 9:1485     Reference: October 30th, 2018
Gene Product: November 15th, 2017
Gene Model: November 15th, 2017
3 months agoauxrp1 auxin-regulated protein1: involved in stalk-rot disease resistance; encodes an auxin-regulated protein with a single DUF966 domain
 
GRMZM2G063298
Ye, JR et al. 2018. Molecular Plant pp.doi: 10.1016/j.molp.2018.10.005     Reference: October 30th, 2018
Variation: October 30th, 2018
Gene Model: October 30th, 2018
3 months agocg1 corngrass1: semidominant Cg1 plants have narrow leaves, extreme tilleringCg1 encodes two tandem miR156 genes that are overexpressed in the meristem and lateral organs. George Chuck, 2007
3.02
GRMZM2G022489
Ligaba-Osena, A et al. 2018. Int J Genomics doi; 10.1155/2018/8581258     Reference: October 26th, 2018
Gene Product: June 17th, 2016
Variation: August 25th, 2011
Gene Model: April 5th, 2013
Recommended by George Chuck:
September 25th, 2007
3 months agobnlg1677  :
10.07
GRMZM5G898792
    Variation: September 1st, 2003
Gene Model: October 24th, 2018
3 months agoufg75b  :
10.07
GRMZM2G120136
    Variation: October 24th, 2018
Gene Model: October 24th, 2018
3 months agolc1 red leaf color1: dominant Lc1 confers anthocyanin in coleoptile, nodes, auricle, leaf blade, etc. (compare Sn1 and Hopi1); displaced r1 gene
10.06
GRMZM5G822829
Schnable, J; Freeling, M. 2011. PLoS One 6(3):e17855. doi:10.1371/journal.pone.0017855     Reference: September 27th, 2011
Gene Product: September 1st, 2003
Variation: September 1st, 2003
Gene Model: October 23rd, 2018
3 months agoumc1477  :
10.04 - 10.06
GRMZM2G016477
    Variation: September 1st, 2003
Gene Model: October 23rd, 2018
3 months agolug3 leunig-related3:
1.12
GRMZM2G036169
Li, HY et al. 2016. J Plant Biol 59:603-615     Reference: December 12th, 2016
Gene Product: October 23rd, 2018
Gene Model: December 12th, 2016
3 months agolug5 leunig-related5:
3.04
   Li, HY et al. 2016. J Plant Biol 59:603-615     Reference: December 12th, 2016
Gene Product: October 23rd, 2018
Variation: September 25th, 2007
3 months agoans2 anthranilate synthase component II homolog2:
 
GRMZM2G171383
    Variation: October 23rd, 2018
Gene Model: October 22nd, 2013
3 months agotpl1 topless-related1:
 
GRMZM2G316967
Liu, X et al. 2018. Plant Physiol pp.doi: 10.1104/pp.18.00913     Reference: October 23rd, 2018
Gene Product: October 23rd, 2018
Gene Model: December 12th, 2016
3 months agotpl2 topless-related2:
 
GRMZM2G030422
Liu, X et al. 2018. Plant Physiol pp.doi: 10.1104/pp.18.00913     Reference: October 23rd, 2018
Gene Product: October 23rd, 2018
Gene Model: December 12th, 2016
3 months agolug1 leunig-related1:
 
GRMZM2G361398
Li, HY et al. 2016. J Plant Biol 59:603-615     Reference: December 12th, 2016
Gene Product: October 23rd, 2018
Gene Model: December 12th, 2016
3 months agolug4 leunig-related4:
 
GRMZM2G097640
Li, HY et al. 2016. J Plant Biol 59:603-615     Reference: December 12th, 2016
Gene Product: October 23rd, 2018
Gene Model: December 12th, 2016
3 months agolug6 leunig-related6:
 
GRMZM2G149708
Li, HY et al. 2016. J Plant Biol 59:603-615     Reference: December 12th, 2016
Gene Product: October 23rd, 2018
Gene Model: December 12th, 2016
3 months agolug7 leunig-related7:
 
GRMZM2G111247
Li, HY et al. 2016. J Plant Biol 59:603-615     Reference: December 12th, 2016
Gene Product: October 23rd, 2018
Gene Model: December 12th, 2016
3 months agolug8 leunig-related8:
 
GRMZM2G061186
Li, HY et al. 2016. J Plant Biol 59:603-615     Reference: December 12th, 2016
Gene Product: October 23rd, 2018
Gene Model: December 12th, 2016
3 months agoans3 anthranilate synthase component II homolog2: anthranilate synthase homolog
 
GRMZM2G049892
    Gene Product: October 23rd, 2013
Gene Model: October 23rd, 2018
3 months agolug2 leunig-related2:
5.08
GRMZM2G079013
Li, HY et al. 2016. J Plant Biol 59:603-615     Reference: December 12th, 2016
Gene Product: October 23rd, 2018
Gene Model: December 12th, 2016
3 months agorelk3 rel2-like3:
9.06
GRMZM2G550865
Liu, X et al. 2018. Plant Physiol pp.doi: 10.1104/pp.18.00913     Reference: October 23rd, 2018
Gene Product: October 23rd, 2018
Gene Model: October 23rd, 2018
4 months agobnlg1074  :
10.04
GRMZM5G828581
    Variation: September 1st, 2003
Gene Model: October 22nd, 2018
4 months agonpi445a  : Previous results indicated this probe mapped to chromosome 5 near the centromere.
10.03
GRMZM2G304010
Shattuck-Eidens, DM et al. 1990. Genetics 126:207-217     Reference: September 1st, 2003
Variation: September 1st, 2003
Gene Model: October 22nd, 2018
4 months agoemp5 empty pericarp5: encodes a mitochondrion-targeted DYW subgroup pentatricopeptide repeat (PPR) protein; mutant has empty pericarp phenotype
 
GRMZM2G060536
Zheng, P et al. 2018. Plant Growth Regulation pp.doi:10.1007/s10725-018-0447-8     Reference: October 22nd, 2018
Gene Product: December 27th, 2016
Variation: March 12th, 2013
Gene Model: March 11th, 2013
4 months agoumc1345  :
10.03
GRMZM2G073077
    Variation: September 1st, 2003
Gene Model: October 21st, 2018
4 months agohb17 Homeobox-transcription factor 17: similar to Arbidopsis homeobox-leucine zipper protein MERISTEM L1Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
10.03
GRMZM2G118063
Yilmaz, A et al. 2009. Plant Physiol 149:171-180     Reference: May 12th, 2011
Variation: September 1st, 2003
Gene Model: October 21st, 2018
4 months agoctb1 chitinase B1: cDNA sequence corresponds to protein sequence of maize chitinase B
10.04
GRMZM2G005633
Noonan, J et al. 2017. Int J Mol Sci 8:E1938     Reference: September 16th, 2017
Gene Product: September 1st, 2003
Variation: September 1st, 2003
Gene Model: October 21st, 2018
4 months agobnl3.04  :
10.00
GRMZM2G427014
Hong, K et al. 1993. Mol Gen Genet 239:115-121     Reference: September 1st, 2003
Variation: September 1st, 2003
Gene Model: October 21st, 2018
4 months agonlp9 NLP-transcription factor 9: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
10.04
GRMZM2G105004
Wang, ZK et al. 2018. Physiol Plant pp.doi: 10.1111/ppl.12696     Reference: January 25th, 2018
Variation: July 29th, 2004
Gene Model: October 21st, 2018
4 months agod1 dwarf plant1: andromonoecious, short, compact plants; responds to gibberellins; d1-t intermediate in height
3.03
GRMZM2G036340
Wang, YJ et al. 2018. Plant Mol Biol pp.doi: 10.1007/s11103-018-0788-8     Reference: October 20th, 2018
Gene Product: October 25th, 2014
Variation: October 30th, 2014
Gene Model: October 2nd, 2012
4 months agola1 lazy plant1: prostrate growth habit
4.03 - 4.04
GRMZM2G135019
Wang, YJ et al. 2018. Plant Mol Biol pp.doi: 10.1007/s11103-018-0788-8     Reference: October 20th, 2018
Gene Product: October 9th, 2013
Variation: February 26th, 2015
Gene Model: October 8th, 2013
4 months agomyb21 MYB-transcription factor 21: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Wang, YJ et al. 2018. Plant Mol Biol pp.doi: 10.1007/s11103-018-0788-8     Reference: October 20th, 2018
Gene Product: July 25th, 2017
4 months agotps3 terpene synthase3:
 
GRMZM2G064406
Wang, YJ et al. 2018. Plant Mol Biol pp.doi: 10.1007/s11103-018-0788-8     Reference: October 20th, 2018
Gene Product: May 28th, 2012
Variation: May 28th, 2012
Gene Model: May 28th, 2012
4 months agoggps3 geranylgeranyl pyrophosphate synthase3: part of multigene family encoding geranylgeranyl diphosphate synthase
 
GRMZM2G058404
Wang, YJ et al. 2018. Plant Mol Biol pp.doi: 10.1007/s11103-018-0788-8     Reference: October 20th, 2018
Gene Product: April 8th, 2013
Gene Model: April 8th, 2013
4 months agod11 dwarf11: dominant mutant that appears to inhibit GA biosynthesis.
 
   Wang, YJ et al. 2018. Plant Mol Biol pp.doi: 10.1007/s11103-018-0788-8     Reference: October 20th, 2018
Variation: June 18th, 2013
4 months agoks2 kaurene synthase2:
 
GRMZM2G093526
Wang, YJ et al. 2018. Plant Mol Biol pp.doi: 10.1007/s11103-018-0788-8     Reference: October 20th, 2018
Gene Product: August 16th, 2012
Gene Model: October 27th, 2014
4 months agoga20ox5 gibberellin 20-oxidase5:
 
GRMZM2G049418
Wang, YJ et al. 2018. Plant Mol Biol pp.doi: 10.1007/s11103-018-0788-8     Reference: October 20th, 2018
Gene Product: October 28th, 2014
Variation: July 6th, 2017
Gene Model: October 29th, 2014
4 months agoga2ox4 gibberellin 2-oxidase4:
 
GRMZM2G153359
Wang, YJ et al. 2018. Plant Mol Biol pp.doi: 10.1007/s11103-018-0788-8     Reference: October 20th, 2018
Gene Product: October 27th, 2014
Gene Model: October 27th, 2014
4 months agoga2ox7 gibberellin 2-oxidase7:
 
GRMZM2G427618
Wang, YJ et al. 2018. Plant Mol Biol pp.doi: 10.1007/s11103-018-0788-8     Reference: October 20th, 2018
Gene Product: October 27th, 2014
Gene Model: October 27th, 2014
4 months agoga2ox8 gibberellin 2-oxidase8:
 
GRMZM2G155686
Wang, YJ et al. 2018. Plant Mol Biol pp.doi: 10.1007/s11103-018-0788-8     Reference: October 20th, 2018
Gene Product: October 27th, 2014
Gene Model: October 27th, 2014
4 months agoscro1 scarecrow1: mRNA expressed in endodermis and quiescent center of root, influencing radial pattern
4.08
GRMZM2G131516
Kumar, D; Kellogg, EA. 2018. New Phytol pp.doi: 10.1111/nph.15491     Reference: October 18th, 2018
Gene Product: August 26th, 2015
Variation: November 12th, 2012
Gene Model: November 11th, 2012
Recommended by Ed Coe:
January 25th, 2007
4 months agoisr1 inhibitor of striate1: (a.k.a. Ej1), dominant Isr1 plants have reduced expression of sr2 and other leaf-striping factors
10.06
   Kumar, D; Kellogg, EA. 2018. New Phytol pp.doi: 10.1111/nph.15491     Reference: October 18th, 2018
Variation: September 1st, 2003
4 months agotan1 tangled1: (was py1) leaves short, pointed, fine white streaks; displays abnormally oriented cell divisions and altered growth and development throughout the plant
6.05
   Kumar, D; Kellogg, EA. 2018. New Phytol pp.doi: 10.1111/nph.15491     Reference: October 18th, 2018
Variation: June 29th, 2005
4 months agors1 rough sheath1: shoot meristem and developing stem specific; dominant Rs1 plants have extreme ligule disorganization (aka kn2)
7.00
GRMZM2G028041
Kumar, D; Kellogg, EA. 2018. New Phytol pp.doi: 10.1111/nph.15491     Reference: October 18th, 2018
Gene Product: September 30th, 2015
Variation: November 18th, 2013
Gene Model: September 30th, 2015
4 months agors2 rough sheath2: short, zigzag plants with warty, distorted sheaths and leaves
1.05
   Kumar, D; Kellogg, EA. 2018. New Phytol pp.doi: 10.1111/nph.15491     Reference: October 18th, 2018
Gene Product: September 1st, 2003
Variation: May 9th, 2009
4 months agosr2 striate leaves2: white stripes on blade and sheath of upper leaves
10.07
   Kumar, D; Kellogg, EA. 2018. New Phytol pp.doi: 10.1111/nph.15491     Reference: October 18th, 2018
Variation: September 1st, 2003
4 months agogras58 GRAS-transcription factor 58: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.Kranz anatomy; SHR/SCR signaling
 
   Kumar, D; Kellogg, EA. 2018. New Phytol pp.doi: 10.1111/nph.15491     Reference: October 18th, 2018
Gene Product: August 26th, 2015
Variation: April 9th, 2014
4 months agorgd2 ragged seedling2: mutant expression is variable from reduced midrib/moderately narrow leaf to filamentous or even radial leaves
1.04
GRMZM5G852170
Kumar, D; Kellogg, EA. 2018. New Phytol pp.doi: 10.1111/nph.15491     Reference: October 18th, 2018
Gene Product: August 12th, 2016
Variation: July 6th, 2010
Gene Model: August 17th, 2017
4 months agocsld1 cellulose synthase-like D1: participates in cell wall polysaccharides formation during cell division; mutants have narrow leaves
 
GRMZM2G015886
Li, W et al. 2018. BMC Plant Biology 18:239     Reference: October 18th, 2018
Gene Product: October 7th, 2016
Variation: October 18th, 2018
Gene Model: October 18th, 2018
4 months agopve1 puncate vascular expression1: PVE1 may function downstream of RGD2 in a pathway that intersects and interacts with the ta-siARF pathway (Zhang et al 2012)
5.03
AC211276.4_FG008
Kumar, D; Kellogg, EA. 2018. New Phytol pp.doi: 10.1111/nph.15491     Reference: October 18th, 2018
Variation: June 16th, 2012
Gene Model: June 15th, 2012
4 months agozar8 Zea mays ARGOS8: Over-expression can lead to improved drought tolerance
 
GRMZM2G354338
Shi, JR et al. 2018. Plant J pp.doi: 10.1111/tpj.14131     Reference: October 17th, 2018
Gene Product: August 3rd, 2015
Gene Model: August 1st, 2015
4 months agoxyl1 xylanase1: Encodes an endoxylanase synthesized by a tapetum mRNA; predominant protein on the surface of maize pollen
 
GRMZM2G170839
Schnable, J; Freeling, M. 2011. PLoS One 6(3):e17855. doi:10.1371/journal.pone.0017855     Reference: September 27th, 2011
Gene Product: September 1st, 2003
Variation: October 17th, 2018
Gene Model: October 15th, 2018
4 months agobnlg1129  :
9.08
GRMZM2G168760
    Variation: September 1st, 2003
Gene Model: October 15th, 2018
4 months agoxyl2 xylanase2: encoded by one or few genes.
9.06
GRMZM5G850567
Suen, D; Huang, A. 2007. J Biol Chem 282:625-636     Reference: March 4th, 2009
Gene Product: September 1st, 2003
Gene Model: October 15th, 2018
4 months agoras18B1 ras related protein11B1:
 
AC149818.2_FG001
    Variation: January 25th, 2011
Gene Model: October 15th, 2018
4 months agoabi43 ABI3-VP1-transcription factor 43: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
9.07
GRMZM2G028794
Yilmaz, A et al. 2009. Plant Physiol 149:171-180     Reference: May 12th, 2011
Variation: September 1st, 2003
Gene Model: October 14th, 2018
4 months agoumc1060  : similar to Arabidopsis RHO guanyl-nucleotide exchange factor 11
5.04
GRMZM2G346133
    Variation: September 1st, 2003
Gene Model: October 14th, 2018
4 months agoglk34 G2-like-transcription factor 34: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
9.03
GRMZM2G081671
Xu, YJ et al. 2018. Plant Cell Rep pp.doi: 10.1007/s00299-018-2262-0     Reference: February 2nd, 2018
Variation: September 1st, 2003
Gene Model: October 13th, 2018
4 months agooec2 oxygen evolving complex2:
2.03
GRMZM2G021617
Ettinger, WF; Theg, SM. 1992. Plant Physiol 99:791-793     Reference: July 18th, 2012
Variation: February 6th, 2015
Gene Model: October 13th, 2018
4 months agoras11D1 ras-related protein11D1: similar to Arabidopsis RAB GTPase homolog A1D
9.03
GRMZM2G018619
Zhang, JM et al. 2007. J Integr Plant Biol 49:1129-1141     Reference: January 12th, 2011
Variation: October 13th, 2018
Gene Model: October 13th, 2018
4 months agobnl5.04  :
9.03
GRMZM2G306915
Armstrong, CL et al. 1992. Theor Appl Genet 84:755-762     Reference: September 1st, 2003
Variation: September 1st, 2003
Gene Model: October 13th, 2018
4 months agodhn2 dehydrin2: polymorphic protein in embryos of some inbredssimilar to Arabidopsis dehydrin Rab18
9.03
GRMZM2G098750
Asghar, R; Fenton, RD; DeMason, DA; Close, TJ. 1994. Protoplasma 177:87-94     Reference: September 1st, 2003
Gene Product: September 1st, 2003
Gene Model: October 12th, 2018
4 months agohsk1 high-sulfur keratin homolog1: endosperm cDNA 5C04B04 (uaz144), similar to high-sulfur keratin; relation to uaz144a (bin 4.06) and uaz144b (bin 5.06) unclear
9.03
GRMZM5G844723
Schnable, J; Freeling, M. 2011. PLoS One 6(3):e17855. doi:10.1371/journal.pone.0017855     Reference: September 27th, 2011
Gene Product: September 1st, 2003
Variation: September 1st, 2003
Gene Model: October 12th, 2018
4 months agobnlg2122  :
9.01
GRMZM2G124276
    Variation: October 11th, 2018
Gene Model: October 11th, 2018
4 months agonut1 necrotic upper tips1: Ac-tagged mutation, necrotic upper leaf tips and blasted tassel.
 
GRMZM2G041668
Dong, Zhaobin; et al. 2016. Maize Genetics Conference Abstracts. 58:P191   AT1G12260 (TAIR)
LOC_Os06g01480 (MSU/TIGR)
Reference: June 22nd, 2016
Gene Product: September 22nd, 2015
Variation: October 10th, 2018
Gene Model: November 15th, 2017
4 months agohnh1 HNH endonuclease domain-containing protein1: involved in degrading linear and circular DNA and participates in mitochondrial DNA regulation during pollen development
 
GRMZM2G074804
Ma, F et al. 2018. Plant Physiol pp.DOI: 10.1104/pp.18.00754   AT1G18680 (TAIR) Reference: October 10th, 2018
Gene Product: October 10th, 2018
Gene Model: October 10th, 2018
4 months agostk1 serine threonine kinase1: mutants have reduced pollen transmission
9.02
   Fan, MX et al. 2018. Plant Biotechnol J pp.doi: 10.1111/pbi.12880     Reference: January 13th, 2018
Gene Product: May 13th, 2014
Variation: October 10th, 2018
4 months agofl3 floury3: endosperm opaque, soft; dosage effect
8.03
GRMZM2G006585
Wang, JC et al. 2018. BMC Plant Biology pp.doi; 10.1186/s12870-018-1443-x     Reference: October 6th, 2018
Gene Product: September 7th, 2017
Variation: September 7th, 2017
Gene Model: September 7th, 2017
4 months agoplatz5 PLATZ-transcription factor 5: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
2.02
GRMZM2G131280
Wang, JC et al. 2018. BMC Plant Biology pp.doi; 10.1186/s12870-018-1443-x     Reference: October 6th, 2018
Variation: February 16th, 2018
Gene Model: February 16th, 2018
4 months agowrky111 WRKY-transcription factor 111: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Wang, C-T et al. 2018. Int J Mol Sci 19:3046     Reference: October 6th, 2018
Gene Product: July 24th, 2017
Variation: July 24th, 2017
4 months agofbr1 few-branched1: dominant Fbr1 plants have tassel reduced to 0-3 branches; bract replaces next-to-bottom branch
 
   Dari, S et al. 2018. Maydica 63     Reference: October 5th, 2018
Variation: September 1st, 2003
4 months agowrky70 WRKY-transcription factor 70: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
2.02
GRMZM2G024898
Yilmaz, A et al. 2009. Plant Physiol 149:171-180     Reference: May 12th, 2011
Variation: September 1st, 2003
Gene Model: October 2nd, 2018
4 months agoraf1 Rubisco Assembly Factor 1: Rubisco Accumulation Factor1; promotes Rubisco assembly. (A. Barkan, 2015)Encodes a previously unstudied protein that is conserved in the green lineage and localizes to bundle sheath chloroplasts
 
GRMZM2G457621
Salesse-Smith, CE et al. 2018. Nature Plants 4:802-810     Reference: October 2nd, 2018
Gene Product: October 4th, 2014
Variation: October 4th, 2014
Gene Model: October 4th, 2014
4 months agomrpa5 multidrug resistance-associated protein5:
 
GRMZM2G084181
Goodman, CD; Casati, P; Walbot, V. 2004. Plant Cell. 16:1812-1826     Reference: October 31st, 2009
Variation: May 14th, 2011
Gene Model: October 2nd, 2018
4 months agoraf2 rubisco accumulation factor2: Rubisco Accumulation Factor2; promotes Rubisco assembly. (A. Barkan, 2015)mutant is seedling-lethal, Rubisco-deficient
 
GRMZM2G139123
Salesse-Smith, CE et al. 2018. Nature Plants 4:802-810     Reference: October 2nd, 2018
Gene Product: December 16th, 2015
Variation: October 4th, 2014
Gene Model: October 4th, 2014
4 months agonactf82 NAC-transcription factor 82: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Zhu, YH et al. 2018. Mol Breed 38:125     Reference: September 30th, 2018
Gene Product: September 22nd, 2015
Variation: September 30th, 2018
4 months agoms39 male sterile39: mutant is male sterile and also exhibits a shorter plant height and tassel length and decreased tassel branch number
 
GRMZM5G804976
Zhu, YH et al. 2018. Mol Breed 38:125     Reference: September 30th, 2018
Gene Product: September 5th, 2012
Variation: September 29th, 2018
Gene Model: September 28th, 2018
4 months agonkd2 naked endosperm2: double mutants have multiple (2-5) layers of peripheral endosperm cells that lack starch granules or other features of starchy endosperm
10.06
GRMZM5G884137
Zhan, JP et al. 2018. Plant Cell pp.doi: 10.1105/tpc.18.00392     Reference: September 28th, 2018
Gene Product: January 3rd, 2015
Variation: December 21st, 2017
Gene Model: December 21st, 2017
4 months agonkd1 naked endosperm1: double mutants have multiple (2-5) layers of peripheral endosperm cells that lack starch granules or other features of starchy endosperm
 
GRMZM2G129261
Zhan, JP et al. 2018. Plant Cell pp.doi: 10.1105/tpc.18.00392     Reference: September 28th, 2018
Gene Product: January 3rd, 2015
Variation: January 3rd, 2015
Gene Model: January 2nd, 2015
4 months agodba2 DNA binding activity2: cDNA pAS12 has binding activity; gene specific
 
GRMZM2G070360
Davis, G et al. 1996. Maize Genetics Conference Abstracts 38     Reference: September 1st, 2003
Variation: September 25th, 2018
Gene Model: September 25th, 2018
4 months agosk1 silkless ears1: pistils abort, no silks
2.03 - 2.04
GRMZM2G021786
Zhao, Y et al. 2018. Frontiers Plant Sci pp.doi: 10.3389/fpls.2018.01227   AT3G22250 (TAIR)
LOC_Os04g44354 (MSU/TIGR)
Reference: August 21st, 2018
Gene Product: September 24th, 2018
Variation: August 21st, 2018
Gene Model: October 31st, 2016
4 months agosm1 salmon silks1: silks salmon color with P1-rr and P1-wr, brown with P1-ww
6.05 - 6.05
GRMZM2G031311
Li, QX et al. 2018. J Agric Food Chem pp.doi: 10.1021/acs.jafc.8b03865     Reference: September 24th, 2018
Gene Product: May 26th, 2016
Variation: May 26th, 2016
Gene Model: May 26th, 2016
4 months agowx1 waxy1: amylopectin (stained red by iodine) replaces amylose (blue staining) in endosperm and pollen; extensive allelic series; application: highly branched starch has gelling properties, used for food gels, adhesives, and other industrial purposes; SSRs phi022, 027, 061NCBI: granule-bound starch synthase 1, chloroplastic/amyloplastic
9.03
   Li, CB et al. 2018. Plant Cell pp.doi: 10.1105/tpc.18.00422     Reference: September 24th, 2018
Gene Product: June 4th, 2008
Variation: March 4th, 2017
4 months agophp20793  :
8.08
GRMZM2G166441
Beavis, WD et al. 1991. Theor Appl Genet 83:141-145     Reference: September 1st, 2003
Variation: September 24th, 2018
Gene Model: September 2nd, 2018
4 months agowrky22 WRKY-transcription factor 22: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
8.09
GRMZM2G111354
Yilmaz, A et al. 2009. Plant Physiol 149:171-180     Reference: May 12th, 2011
Variation: September 1st, 2003
Gene Model: September 24th, 2018
4 months agoglk101 G2-like-transcription factor 1: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
7.02
GRMZM2G064197
Bai, JR et al. 2018. Genetica pp.doi: 10.1007/s10709-018-0042-y     Reference: September 24th, 2018
Variation: September 1st, 2003
Gene Model: September 6th, 2018
4 months agocadtfr8 CCAAT-DR1-transcription factor 8: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
8.07
GRMZM5G866699
Yilmaz, A et al. 2009. Plant Physiol 149:171-180     Reference: May 12th, 2011
Variation: September 1st, 2003
Gene Model: September 24th, 2018
4 months agoumc1005  :
8.08
GRMZM2G091121
    Variation: September 1st, 2003
Gene Model: September 24th, 2018
4 months agosm2 salmon silk2: like sm1; silks salmon color with P1-rr and P1-wr, brown with P1-ww
2.07
GRMZM2G180283
Li, QX et al. 2018. J Agric Food Chem pp.doi: 10.1021/acs.jafc.8b03865     Reference: September 24th, 2018
Gene Product: May 26th, 2016
Variation: May 26th, 2016
Gene Model: May 26th, 2016
4 months agoumc1268  :
8.07
GRMZM2G112912
    Variation: September 1st, 2003
Gene Model: September 24th, 2018
4 months agoohp1 opaque2 heterodimerizing protein1: o2 heterodimerizing protein; one of two loci
1.11
   Li, CB et al. 2018. Plant Cell pp.doi: 10.1105/tpc.18.00422     Reference: September 24th, 2018
Gene Product: September 1st, 2003
Variation: February 2nd, 2015
4 months agogrp1 glycine-rich protein1: protein with high glycine content and repetitive glycine stretches; putative cell wall components
1.08
   Li, CB et al. 2018. Plant Cell pp.doi: 10.1105/tpc.18.00422     Reference: September 24th, 2018
Gene Product: September 1st, 2003
Variation: June 5th, 2014
4 months agoubf9 ubiquitin fusion protein9: genomic sequence, hybridizing mRNA expressed during cell division and/or cell growth; multiple copies in genome
 
GRMZM2G431821
Chen, K and Rubenstein, I. 1991. Gene 107:205-212     Reference: September 1st, 2003
Gene Product: September 1st, 2003
Variation: September 1st, 2003
Gene Model: September 24th, 2018
4 months agoumc1607  :
8.07
GRMZM2G033330
    Variation: September 1st, 2003
Gene Model: September 24th, 2018
4 months agobzip22 bZIP-transcription factor 22: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Li, CB et al. 2018. Plant Cell pp.doi: 10.1105/tpc.18.00422   AT1G43700 (TAIR) Reference: September 24th, 2018
Gene Product: August 21st, 2018
Variation: September 24th, 2018
4 months agotcptf29  : Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
8.09
GRMZM2G148022
Yilmaz, A et al. 2009. Plant Physiol 149:171-180     Reference: May 12th, 2011
Gene Product: November 2nd, 2014
Gene Model: September 24th, 2018
4 months agoumc1663  :
8.09
GRMZM2G160444
    Variation: September 1st, 2003
Gene Model: September 24th, 2018
4 months agoumc1673  :
8.08
GRMZM2G139374
    Variation: September 1st, 2003
Gene Model: September 24th, 2018
4 months agomybr51 MYB-related-transcription factor 51:
5.09
GRMZM5G811428
Bai, JR et al. 2018. Genetica pp.doi: 10.1007/s10709-018-0042-y     Reference: September 24th, 2018
Variation: September 1st, 2003
Gene Model: February 2nd, 2018
4 months agosbe3 starch branching enzyme3:
8.06
GRMZM2G005298
Li, CB et al. 2018. Plant Cell pp.doi: 10.1105/tpc.18.00422     Reference: September 24th, 2018
Gene Product: June 6th, 2011
Variation: June 1st, 2011
Gene Model: September 23rd, 2018
4 months agozp27 27-kDa zein protein: proline rich; least abundant of zeins in endosperm, not clear if all in zp27 cluster
7.02
   Li, CB et al. 2018. Plant Cell pp.doi: 10.1105/tpc.18.00422     Reference: September 24th, 2018
Gene Product: September 17th, 2010
Variation: September 16th, 2010
4 months agoAY110053  : similar to Arabidopsis protein kinase family protein
8.08
GRMZM2G139223
    Variation: July 29th, 2004
Gene Model: September 24th, 2018
4 months agoremo2 remorin2:
1.01
GRMZM2G137352
Li, CB et al. 2018. Plant Cell pp.doi: 10.1105/tpc.18.00422     Reference: September 24th, 2018
Gene Product: September 24th, 2018
Gene Model: September 24th, 2018
4 months agofnsi1 flavone synthase typeI1: Encodes a flavone synthase that is of the soluble Fe2+/2- oxoglutarate-dependent dioxygenase class
 
GRMZM2G099467
Li, QX et al. 2018. J Agric Food Chem pp.doi: 10.1021/acs.jafc.8b03865   AT5G24530 (TAIR) Reference: September 24th, 2018
Gene Product: August 15th, 2015
Variation: August 14th, 2015
Gene Model: August 14th, 2015
4 months agoremo1 remorin1:
 
GRMZM2G107774
Jamann, TM et al. 2016. Theor Appl Genet 129:591-602     Reference: February 29th, 2016
Gene Product: September 24th, 2018
Variation: February 6th, 2016
Gene Model: February 6th, 2016
4 months agougt1 UDP-glucosyl transferase1:
 
GRMZM2G162755
Tohge, T et al. 2017. J Exp Bot 68:4013-4028     Reference: September 20th, 2017
Gene Product: September 24th, 2018
Gene Model: May 6th, 2016
4 months agofns1 flavone synthase1:
 
GRMZM2G167336
Li, QX et al. 2018. J Agric Food Chem pp.doi: 10.1021/acs.jafc.8b03865     Reference: September 24th, 2018
Gene Product: September 20th, 2017
Gene Model: May 6th, 2016
4 months agocgt1 C-glucosyl transferase1:
 
GRMZM2G162783
Li, QX et al. 2018. J Agric Food Chem pp.doi: 10.1021/acs.jafc.8b03865     Reference: September 24th, 2018
Gene Product: September 24th, 2018
Gene Model: September 24th, 2018
4 months agoglk58 G2-like-transcription factor 58: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
6.06
GRMZM2G117854
Bai, JR et al. 2018. Genetica pp.doi: 10.1007/s10709-018-0042-y     Reference: September 24th, 2018
Variation: September 25th, 2007
Gene Model: February 2nd, 2018
4 months agocchh7 Cys2His2 Zinc Finger7:
7.01
GRMZM2G144645
Li, CB et al. 2018. Plant Cell pp.doi: 10.1105/tpc.18.00422     Reference: September 24th, 2018
Gene Product: April 4th, 2017
Gene Model: September 24th, 2018
4 months agoohp3 opaque2 heterodimerizing protein3:
8.05
GRMZM2G143469
Li, CB et al. 2018. Plant Cell pp.doi: 10.1105/tpc.18.00422     Reference: September 24th, 2018
Gene Product: August 21st, 2018
Gene Model: September 24th, 2018
4 months agobnlg1031  : similar to Arabidopsis 4,5-DOPA dioxygenase extradiol-like protein
8.06
GRMZM2G092817
    Variation: September 1st, 2003
Gene Model: September 23rd, 2018
4 months agoumc2356  :
8.06
GRMZM2G054341
    Variation: September 23rd, 2018
Gene Model: September 23rd, 2018
4 months agoAY109883  :
8.06
GRMZM2G312365
    Variation: July 29th, 2004
Gene Model: September 23rd, 2018
5 months agopgd3 phosphogluconate dehydrogenase3: single copy cDNA, csu843, similar to alfalfa enzyme; pentose phosphate pathway
4.03
GRMZM2G440208
Trevisan, S et al. 2018. Physiol Plant pp.doi: 10.1111/ppl.12839     Reference: September 22nd, 2018
Gene Product: September 1st, 2003
Variation: February 28th, 2013
Gene Model: July 28th, 2016
5 months agosod4 superoxide dismutase4: electrophoretic mobility; cytosolic; Cu-Zn dimeric; intralocus hybrid bands occur; two similar sequences X17564 (sod4), X17565(sod4A)
1.04
   Trevisan, S et al. 2018. Physiol Plant pp.doi: 10.1111/ppl.12839     Reference: September 22nd, 2018
Gene Product: February 12th, 2007
Variation: April 20th, 2005
5 months agompk7 MAP kinase7:
 
GRMZM2G002100
Trevisan, S et al. 2018. Physiol Plant pp.doi: 10.1111/ppl.12839     Reference: September 22nd, 2018
Gene Product: July 12th, 2013
Variation: January 18th, 2013
Gene Model: July 9th, 2013
5 months agoupb1 upbeat1: transcription factor with a bHLH domain; transcriptional regulation affected by nitrate
 
GRMZM2G040364
Trevisan, S et al. 2018. Physiol Plant pp.doi: 10.1111/ppl.12839   AT2G47270 (TAIR) Reference: September 22nd, 2018
Gene Product: September 14th, 2016
Gene Model: September 22nd, 2018
5 months agomkk2 mitogen-activated protein kinase kinase2:
 
GRMZM2G400470
Trevisan, S et al. 2018. Physiol Plant pp.doi: 10.1111/ppl.12839   AT4G29810 (TAIR) Reference: September 22nd, 2018
Gene Product: July 12th, 2013
Gene Model: September 22nd, 2018
5 months agoprx112 peroxidase112:
 
GRMZM2G033985
Trevisan, S et al. 2018. Physiol Plant pp.doi: 10.1111/ppl.12839     Reference: September 22nd, 2018
Gene Product: September 18th, 2015
Gene Model: September 22nd, 2018
5 months agoprx39 peroxidase39:
 
GRMZM2G085967
Trevisan, S et al. 2018. Physiol Plant pp.doi: 10.1111/ppl.12839     Reference: September 22nd, 2018
Gene Product: September 18th, 2015
Gene Model: September 22nd, 2018
5 months agoprx64 peroxidase64:
 
GRMZM2G076562
Trevisan, S et al. 2018. Physiol Plant pp.doi: 10.1111/ppl.12839     Reference: September 22nd, 2018
Gene Product: September 18th, 2015
Gene Model: September 22nd, 2018
5 months agopgd4 phosphogluconate dehydrogenase4:
10.04
GRMZM2G177077
Trevisan, S et al. 2018. Physiol Plant pp.doi: 10.1111/ppl.12839     Reference: September 22nd, 2018
Gene Product: September 1st, 2003
Gene Model: September 22nd, 2018
5 months agobnlg1651  :
8.05
GRMZM2G020544
    Variation: September 1st, 2003
Gene Model: September 20th, 2018
5 months agodof5 C2C2-Dof-transcription factor 5: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
8.05
GRMZM5G880268
Chen, Y; Cao, J. 2014. Plant Mol Biol Rep pp.doi: 10.1007/s11105-014-0835-9     Reference: November 26th, 2014
Variation: September 20th, 2018
Gene Model: September 20th, 2018
5 months agoereb117 AP2-EREBP-transcription factor 117: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
8.05
GRMZM2G113078
Yilmaz, A et al. 2009. Plant Physiol 149:171-180     Reference: May 12th, 2011
Variation: September 1st, 2003
Gene Model: September 20th, 2018
5 months agommt1 methionine S-methyltransferase1:
8.05
GRMZM2G098031
Bourgis, F. 1999. Plant Cell. 11:1485-1498     Reference: July 19th, 2004
Variation: September 20th, 2018
Gene Model: September 20th, 2018
5 months agobnlg1176a  :
8.05
GRMZM2G375222
    Variation: September 1st, 2003
Gene Model: September 19th, 2018
5 months agoumc1263  : similar to Arabidopsis BRCT domain-containing DNA repair protein
8.05
GRMZM2G372200
    Variation: September 1st, 2003
Gene Model: September 19th, 2018
5 months agoiaa38 Aux/IAA-transcription factor 38: similar to Arabidopsis auxin-responsive protein IAA27Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
8.04
GRMZM2G035465
Yilmaz, A et al. 2009. Plant Physiol 149:171-180     Reference: May 12th, 2011
Variation: September 1st, 2003
Gene Model: September 19th, 2018
5 months agosweet3a sugars will eventually be exported transporter3a:
8.04
GRMZM2G179679
Oszvald, M et al. 2018. Plant Physiol pp.DOI: 10.1104/pp.17.01673     Reference: February 7th, 2018
Gene Product: November 4th, 2015
Gene Model: September 19th, 2018
5 months agoumc1959  :
8.05
GRMZM2G090963
    Variation: September 1st, 2003
Gene Model: September 19th, 2018
5 months agoumc1562  :
8.05
GRMZM2G059693
    Variation: September 19th, 2018
Gene Model: September 19th, 2018
5 months agocadtfr15 CCAAT-DR1-transcription factor 15: cDNA 5C05F12 similar to binding protein; single copyLocus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
8.04
GRMZM2G064426
Zhang, Z et al. 2016. Biochem Biophys Res Commun pp.doi: 10.1016/j.bbrc.2016.08.020     Reference: August 8th, 2016
Gene Product: August 9th, 2016
Variation: September 1st, 2003
Gene Model: September 19th, 2018
5 months agoAY110056  : Protein trichome birefringence-like 25
8.04 - 8.04
GRMZM2G131152
    Variation: September 25th, 2007
Gene Model: September 19th, 2018
5 months agoras7B2 ras-related protein7B2:
 
GRMZM5G811797
Zhang, JM et al. 2007. J Integr Plant Biol 49:1129-1141     Reference: January 12th, 2011
Variation: January 20th, 2011
Gene Model: September 19th, 2018
5 months agorps28 ribosomal protein S28: cDNA; SSR umc1741
 
GRMZM2G030293
Chevalier, C et al. 1996. Plant Sci 117:95-105     Reference: September 1st, 2003
Gene Product: September 1st, 2003
Variation: September 19th, 2018
Gene Model: September 18th, 2018
5 months agophi121  :
8.03
GRMZM2G136567
Senior, ML et al. 1996. MNL 70:50-54     Reference: September 1st, 2003
Variation: September 1st, 2003
Gene Model: September 18th, 2018
5 months agopro1 proline responding1: (allele o6) crumpled opaque kernel; green-striped lethal seedling; responds to proline in culture
8.04
GRMZM2G375504
Zhang, SS et al. 2018. Plant Reproduction pp.doi: 10.1007/s00497-018-0344-3     Reference: July 7th, 2018
Gene Product: March 19th, 2015
Variation: September 18th, 2018
Gene Model: June 22nd, 2014
5 months agobnlg1863  :
8.03
GRMZM2G022768
    Variation: September 1st, 2003
Gene Model: September 18th, 2018
5 months agobnlg2082  :
8.03
GRMZM5G842965
    Variation: September 1st, 2003
Gene Model: September 18th, 2018
5 months agoumc1157  :
8.03
GRMZM2G058913
    Variation: September 1st, 2003
Gene Model: September 18th, 2018
5 months agoumc1415  :
8.03
GRMZM2G063676
    Variation: September 1st, 2003
Gene Model: September 18th, 2018
5 months agoumc1470  :
8.03
GRMZM2G145573
    Variation: September 1st, 2003
Gene Model: September 18th, 2018
5 months agoumc1735  :
8.03
GRMZM2G164090
Noonan, J et al. 2017. Int J Mol Sci 8:E1938     Reference: September 16th, 2017
Variation: September 1st, 2003
Gene Model: September 18th, 2018
5 months agockx10 cytokinin oxidase10: Mapped the minor band to this site.
1.07
GRMZM2G348452
Smehilova, M; et al. 2009. J Exp Bot. 60:2701-12     Reference: March 25th, 2014
Gene Product: April 4th, 2014
Variation: September 1st, 2003
Gene Model: September 18th, 2018
5 months agoumc120a  :
8.03
GRMZM2G578572
Beavis, WD et al. 1991. Theor Appl Genet 83:141-145     Reference: September 1st, 2003
Variation: September 1st, 2003
Gene Model: September 18th, 2018
5 months agoAY110032  :
8.03
GRMZM2G102745
    Variation: July 29th, 2004
Gene Model: September 18th, 2018
5 months agoAY110450  : BRCA1/BRCA2-containing complex subunit 3
8.03
GRMZM2G152436
    Variation: July 29th, 2004
Gene Model: September 18th, 2018
5 months agompk3 MAP kinase3: transcript and protein activity upregulated by ABA and H2O2
1.03
GRMZM2G017792
Liu, JX et al. 2018. PLoS One 13:e0203612     Reference: September 18th, 2018
Gene Product: July 9th, 2013
Variation: July 12th, 2013
Gene Model: July 9th, 2013
5 months agobnlg2235  :
8.02
AC196470.3_FG007
    Variation: September 1st, 2003
Gene Model: September 17th, 2018
5 months agocko5 cytokinin oxidase 5:
8.03
GRMZM2G325612
Gu, R et al. 2010. J Plant Growth Reg 29:428-440     Reference: March 28th, 2014
Gene Product: April 4th, 2014
Variation: September 1st, 2003
Gene Model: September 17th, 2018
5 months agoumc1817  :
8.01
GRMZM2G049781
    Variation: September 1st, 2003
Gene Model: September 17th, 2018
5 months agoras7B1 ras-related protein7B1:
 
GRMZM2G058366
Zhang, JM et al. 2007. J Integr Plant Biol 49:1129-1141     Reference: January 12th, 2011
Variation: January 20th, 2011
Gene Model: September 17th, 2018
5 months agobhlh19 bHLH-transcription factor 19: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
8.01 - 8.02
GRMZM2G066057
Yilmaz, A et al. 2009. Plant Physiol 149:171-180     Reference: May 12th, 2011
Variation: September 1st, 2003
Gene Model: September 16th, 2018
5 months agoumc1304  :
8.02
GRMZM2G133552
    Variation: September 1st, 2003
Gene Model: September 16th, 2018
5 months agodxr2 deoxy xylulose reductoisomerase2:
8.01
GRMZM2G036290
Owens, BF, et al. 2014. Genetics. 198:1699-1716     Reference: January 1st, 2015
Gene Product: December 10th, 2011
Gene Model: September 16th, 2018
5 months agorf4 restorer of fertility4: dominant Rf4 restores fertility to cms-C; complementary with Rf5 and Rf6
8.01 - 8.01
   Liu, YM et al. 2018. BMC Plant Biology 18:190     Reference: September 14th, 2018
Variation: September 1st, 2003
5 months agoumc1139  : similar to Arabidopsis ubiquitin-activating enzyme E1 C
8.01
GRMZM2G007915
    Variation: September 1st, 2003
Gene Model: September 14th, 2018
5 months agoumc1414  :
8.01
GRMZM2G020148
    Variation: September 1st, 2003
Gene Model: September 14th, 2018
5 months agoumc1483  :
8.01
GRMZM5G872442
    Variation: March 30th, 2007
Gene Model: September 14th, 2018
5 months agobnl13.05a  : B-A translocations indicate that the probe does not map to 4S, 8L, or 10L.
8.01
GRMZM2G041308
Grant, D et al. 1993. MNL 67:55-61     Reference: September 1st, 2003
Variation: September 1st, 2003
Gene Model: September 14th, 2018
5 months agophi116  : similar to Arabidopsis Nuclear transport factor 2 (NTF2) family protein
7.06
GRMZM2G056772
    Variation: September 1st, 2003
Gene Model: September 13th, 2018
5 months agoglk59 G2-like-transcription factor 59: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
7.05
AC155434.2_FG005
Xu, YJ et al. 2018. Plant Cell Rep pp.doi: 10.1007/s00299-018-2262-0     Reference: February 2nd, 2018
Variation: September 13th, 2018
Gene Model: February 2nd, 2018
5 months agoAY109703  :
7.06
GRMZM2G386824
    Variation: September 25th, 2007
Gene Model: September 13th, 2018
5 months agopht5 phosphate transporter protein5:
 
GRMZM2G041595
Liu, F et al. 2016. Int J Mol Sci 17:903     Reference: June 16th, 2016
Gene Product: June 16th, 2016
Gene Model: September 13th, 2018
5 months agophi069  :
7.05
GRMZM2G448739
Senior, ML et al. 1996. MNL 70:50-54     Reference: September 1st, 2003
Variation: September 1st, 2003
Gene Model: September 12th, 2018
5 months agolls1 lethal leaf spot1: chlorotic-necrotic lesions resembling Helminthosporium carbonum infection
1.01
   Sindhu, A et al. 2018. PLoS One 13:e0201359     Reference: September 12th, 2018
Gene Product: November 5th, 2014
Variation: September 12th, 2018
5 months agoo7 opaque endosperm7: like o1; high lysine content
10.07
GRMZM2G074759
Yang, J et al. 2018. Plant Cell pp.doi: 10.1105/tpc.18.00266     Reference: September 12th, 2018
Gene Product: December 20th, 2011
Variation: February 20th, 2012
Gene Model: December 16th, 2011
5 months agobnlg2259  :
7.04
GRMZM2G037444
    Variation: September 1st, 2003
Gene Model: September 12th, 2018
5 months agoumc1029  :
7.04
GRMZM2G023346
    Variation: September 1st, 2003
Gene Model: September 12th, 2018
5 months agoumc1295a  :
7.04
GRMZM2G080567
    Variation: September 1st, 2003
Gene Model: September 12th, 2018
5 months agoumc1768  :
7.04
GRMZM2G351469
Baysdorfer, C. 1993. submission to dbEST, a nucleotide sequence database     Reference: September 1st, 2003
Variation: September 1st, 2003
Gene Model: September 12th, 2018
5 months agofdl1 fused leaves1: coleoptile-first or first-second leaves fused at epidermis, curly
7.04
GRMZM2G056407
La Rocca, N, et al. 2015. J Exp Bot. 0:doi:10.1093/jxb/erv278     Reference: June 23rd, 2015
Gene Product: September 1st, 2003
Variation: September 12th, 2018
Gene Model: September 12th, 2018
5 months agopht12 phosphate transporter protein12:
 
GRMZM2G041595
Liu, F et al. 2016. Int J Mol Sci 17:903     Reference: June 16th, 2016
Gene Product: June 16th, 2016
Gene Model: September 12th, 2018
5 months agoocd1 oxalyl-CoA decarboxylase1: Mutants have an opaque phenotype and caused dramatic alterations in the metabolome in the endosperm
 
GRMZM2G175171
Yang, J et al. 2018. Plant Cell pp.doi: 10.1105/tpc.18.00266     Reference: September 12th, 2018
Gene Product: September 12th, 2018
Variation: September 12th, 2018
Gene Model: September 12th, 2018
5 months agoIDP363  :
2.05
GRMZM2G042981
    Variation: March 31st, 2005
Gene Model: September 12th, 2018
5 months agoumc1214  : similar to Arabidopsis nuclear transport factor 2 and RNA recognition motif domain-containing protein
7.04
GRMZM2G167932
    Variation: September 11th, 2018
Gene Model: September 11th, 2018
5 months agobnlg1666  :
7.04
GRMZM2G081949
    Variation: September 1st, 2003
Gene Model: September 11th, 2018
5 months agobnlg1805  :
7.03
GRMZM2G167591
    Variation: September 1st, 2003
Gene Model: September 11th, 2018
5 months agoippi1 isopentenyl pyrophosphate isomerase1: similar to Arabidopsis Isopentenyl-diphosphate Delta-isomerase IIpart of multigene family encoding isopentenyl pyrophosphate isomerase
7.03
GRMZM2G108285
Gonzalez-Jorge, S et al. 2016. Plant Physiol 171:1837-1851     Reference: May 23rd, 2017
Gene Product: December 10th, 2011
Variation: September 1st, 2003
Gene Model: September 11th, 2018
5 months agoumc1708  :
7.04
GRMZM2G131228
    Variation: September 1st, 2003
Gene Model: September 11th, 2018
5 months agoumc2332  :
7.04
GRMZM2G131243
    Variation: September 11th, 2018
Gene Model: September 11th, 2018
5 months agooec17 oxygen evolving complex, 17kDa homolog: leaf cDNA csu229 similar to plant oxygen evolving complex polypeptide
7.03
GRMZM2G058070
Ettinger, WF; Theg, SM. 1992. Plant Physiol 99:791-793     Reference: July 18th, 2012
Gene Product: September 1st, 2003
Variation: July 18th, 2012
Gene Model: September 11th, 2018
5 months agoc3h32 C3H-transcription factor32: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
7.04
GRMZM5G842019
Yilmaz, A et al. 2009. Plant Physiol 149:171-180     Reference: May 12th, 2011
Variation: July 29th, 2004
Gene Model: September 11th, 2018
5 months agopsei2 cystatin2: cDNA expressed in E. coli inhibits cysteine proteinases; sequence and gene product activity distinct from psei1
8.08
   Hu, LF et al. 2018. Plant Cell Environ pp.doi: 10.1111/pce.13443     Reference: September 10th, 2018
Gene Product: April 21st, 2008
Variation: January 15th, 2015
5 months agobx14 benzoxazinone synthesis14: encodes an O-methyltransferase that converts DIM2BOA-Glc to HDM2BOA-Glc.
2.05
GRMZM2G127418
Hu, LF et al. 2018. Plant Cell Environ pp.doi: 10.1111/pce.13443     Reference: September 10th, 2018
Gene Product: July 8th, 2013
Variation: June 20th, 2016
Gene Model: June 20th, 2016
5 months agotps10 terpene synthase10:
10.03
GRMZM2G179092
Hu, LF et al. 2018. Plant Cell Environ pp.doi: 10.1111/pce.13443     Reference: September 10th, 2018
Gene Product: September 4th, 2008
Variation: September 4th, 2008
Gene Model: May 28th, 2012
5 months agolox10 lipoxygenase10: green leaf volatiles, circadian, herbivore defense; sequence predicts plastidic location; images show location in non-chlorophyll containing organelles
4.09
GRMZM2G015419
Hu, LF et al. 2018. Plant Cell Environ pp.doi: 10.1111/pce.13443     Reference: September 10th, 2018
Gene Product: January 3rd, 2018
Variation: June 6th, 2014
Gene Model: October 29th, 2015
5 months agobnlg2271  :
7.03
GRMZM2G313643
    Variation: September 1st, 2003
Gene Model: September 10th, 2018
5 months agopme1 pectin methylesterase1: pollen; cDNA and genomic sequences
10.04
GRMZM2G125356
Zhou, LZ et al. 2017. Molecular Plant pp.doi: 10.1016/j.molp.2017.01.012     Reference: February 13th, 2017
Gene Product: September 10th, 2018
Variation: October 8th, 2015
Gene Model: October 8th, 2015
5 months agoumc1112  :
7.03
GRMZM2G139931
    Variation: September 1st, 2003
Gene Model: September 10th, 2018
5 months agoumc1134  :
7.03
GRMZM2G105253
    Variation: September 1st, 2003
Gene Model: September 10th, 2018
5 months agoumc1324  :
7.03
GRMZM2G108874
    Variation: September 1st, 2003
Gene Model: September 10th, 2018
5 months agoprp5 pathogenesis related protein5:
1.06
GRMZM2G402631
Hu, LF et al. 2018. Plant Cell Environ pp.doi: 10.1111/pce.13443     Reference: September 10th, 2018
Gene Product: July 25th, 2018
Variation: August 20th, 2011
Gene Model: October 30th, 2015
5 months agosci1 subtilisin-chymotrypsin inhibitor homolog1: cDNA from germinating embryo infected with Fusarium moniliforme; similar to subtilisin-chymotrypsin inhibitor
8.05
   Hu, LF et al. 2018. Plant Cell Environ pp.doi: 10.1111/pce.13443     Reference: September 10th, 2018
Gene Product: September 1st, 2003
Variation: August 25th, 2015
5 months agorip2 ribosome-inactivating protein2: genomic sequence produces RIP protein in E. coli; cDNA, SSR umc1782
7.04
GRMZM2G119705
Hu, LF et al. 2018. Plant Cell Environ pp.doi: 10.1111/pce.13443     Reference: September 10th, 2018
Gene Product: September 1st, 2003
Variation: November 21st, 2017
Gene Model: July 28th, 2016
5 months agoaos1 allene oxide synthase1: expression induction by herbivory and methyl jasmonate
9.06
GRMZM2G067225
Hu, LF et al. 2018. Plant Cell Environ pp.doi: 10.1111/pce.13443     Reference: September 10th, 2018
Gene Product: September 1st, 2003
Variation: September 24th, 2010
Gene Model: October 29th, 2015
5 months agoprp4 pathogenesis related protein4:
7.00
GRMZM2G465226
Hu, LF et al. 2018. Plant Cell Environ pp.doi: 10.1111/pce.13443     Reference: September 10th, 2018
Gene Product: July 25th, 2018
Variation: August 29th, 2011
Gene Model: November 20th, 2014
5 months agoras6A1 ras-related protein6A1:
 
GRMZM2G075719
Zhang, JM et al. 2007. J Integr Plant Biol 49:1129-1141     Reference: January 12th, 2011
Variation: January 20th, 2011
Gene Model: September 10th, 2018
5 months agotps2 terpene synthase2:
 
GRMZM2G046615
Hu, LF et al. 2018. Plant Cell Environ pp.doi: 10.1111/pce.13443     Reference: September 10th, 2018
Gene Product: May 28th, 2012
Variation: May 28th, 2012
Gene Model: May 28th, 2012
5 months agobx10 benzoxazinone synthesis10:
 
GRMZM2G311036
Hu, LF et al. 2018. Plant Cell Environ pp.doi: 10.1111/pce.13443     Reference: September 10th, 2018
Gene Product: July 8th, 2013
Gene Model: July 8th, 2013
5 months agobx11 benzoxazinone synthesis11:
 
GRMZM2G336824
Hu, LF et al. 2018. Plant Cell Environ pp.doi: 10.1111/pce.13443     Reference: September 10th, 2018
Gene Product: July 8th, 2013
Gene Model: July 8th, 2013
5 months agopme2 pectin methylesterase2:
 
GRMZM2G046618
Hawkins, JS et al. 2014. Plant J 79:375-384     Reference: September 25th, 2015
Gene Product: September 10th, 2018
Gene Model: April 26th, 2014
5 months agocyp19 cytochrome P-450 19:
 
GRMZM2G102079
Hu, LF et al. 2018. Plant Cell Environ pp.doi: 10.1111/pce.13443     Reference: September 10th, 2018
Gene Product: September 26th, 2016
Gene Model: September 26th, 2016
5 months agoZm00001d048936  : candidate gene for ga1
 
GRMZM2G119698
Zhang, ZG et al. 2018. Nature communications p.3678     Reference: September 10th, 2018
Gene Product: September 10th, 2018
Gene Model: September 10th, 2018
5 months agotsah1 tryptophan synthase A homolog1: Homologous to tryptophan synthase alpha subunit but does occur as part of native tryptophan synthase. Localized in the cytosol (Kriechbaumer et al 2008). Function unknown.
1.11
GRMZM2G046163
Hu, LF et al. 2018. Plant Cell Environ pp.doi: 10.1111/pce.13443     Reference: September 10th, 2018
Gene Product: October 14th, 2011
Variation: August 15th, 2014
Gene Model: September 10th, 2018
5 months agomyb152 MYB-transcription factor 152:
7.03
GRMZM2G104551
Agarwal, T et al. 2016. Sci. Rep. 6:28502     Reference: June 23rd, 2016
Variation: September 1st, 2003
Gene Model: September 9th, 2018
5 months agodek1 defective kernel1: germless; colorless (mosaic) aleurone; floury white endosperm; anthocyanins and carotenoids absent; cultured embryos not obtained (aka clf1, gay1)
1.03
   Klein, H et al. 2018. G3 pp.doi: 10.1534/g3.118.200499     Reference: September 8th, 2018
Gene Product: September 1st, 2003
Variation: September 8th, 2018
5 months agobzip7 bZIP-transcription factor 7: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
7.03
GRMZM2G006578
Yilmaz, A et al. 2009. Plant Physiol 149:171-180     Reference: May 12th, 2011
Variation: September 8th, 2018
Gene Model: September 8th, 2018
5 months agoumc1450  :
7.03
GRMZM2G181371
    Variation: September 1st, 2003
Gene Model: September 8th, 2018
5 months agonpi394  :
7.03
GRMZM2G043254
Stuber, CW et al. 1992. Genetics 132:823-839     Reference: September 1st, 2003
Variation: September 1st, 2003
Gene Model: September 8th, 2018
5 months agonod1 narrow odd dwarf1: mutants are small plants with narrow leaves
 
GRMZM2G027821
Klein, H et al. 2018. G3 pp.doi: 10.1534/g3.118.200499   AT4G35920 (TAIR)
LOC_Os03g06120 (MSU/TIGR)
Reference: September 8th, 2018
Gene Product: March 4th, 2017
Variation: September 8th, 2018
Gene Model: March 4th, 2017
5 months agocpps2 copalyl diphosphate synthase2: encodes ent-kaurene synthase, a copalyl diphosphate synthase protein having close identity with An1 gene product; likely duplicate function explains why an1 plants are not fully dwarfed (Harris et al. 2005)
1.04
GRMZM2G044481
Block, AK et al. 2018. Planta pp.doi: 10.1007/s00425-018-2999-2     Reference: September 7th, 2018
Gene Product: August 16th, 2012
Variation: January 22nd, 2018
Gene Model: September 12th, 2011
Recommended by Ed Coe:
January 8th, 2008
5 months agotps23 terpene synthase23: part of defense response to herbivory by western maize rootworm and Spodoptera littoralis but not expressed highly in most North American maize
10.03
GRMZM2G127336
Block, AK et al. 2018. Planta pp.doi: 10.1007/s00425-018-2999-2     Reference: September 7th, 2018
Gene Product: July 21st, 2008
Variation: November 21st, 2017
Gene Model: August 22nd, 2012
5 months agotps4 terpene synthase4: gene product raised in E. coli forms same mixture of sesquiterpene olefins as tsp5 but with quantitative differences.
10.03
GRMZM2G117319
Block, AK et al. 2018. Planta pp.doi: 10.1007/s00425-018-2999-2     Reference: September 7th, 2018
Gene Product: September 4th, 2008
Variation: September 4th, 2008
Gene Model: May 28th, 2012
5 months agotps5 terpene synthase5:
10.03
GRMZM2G074309
Block, AK et al. 2018. Planta pp.doi: 10.1007/s00425-018-2999-2     Reference: September 7th, 2018
Gene Product: September 4th, 2008
Variation: September 4th, 2008
Gene Model: May 26th, 2012
5 months agotps26 terpene synthase26: orthologous to stc1 but function in insect herbivory not clear
6.04
GRMZM2G030583
Block, AK et al. 2018. Planta pp.doi: 10.1007/s00425-018-2999-2     Reference: September 7th, 2018
Gene Product: September 5th, 2008
Variation: September 5th, 2008
Gene Model: August 22nd, 2012
5 months agoumc1713  :
7.03
AC208031.3_FG002
    Variation: September 1st, 2003
Gene Model: September 7th, 2018
5 months agoparp1 poly(ADP-ribose) polymerase1:
8.03
GRMZM2G124718
Muli, JK et al. 2018. Plant 6:8-15     Reference: April 28th, 2018
Gene Product: September 7th, 2018
Variation: August 19th, 2010
Gene Model: August 7th, 2014
5 months agoparp2 poly(ADP-ribose) polymerase2:
2.06
GRMZM5G831712
Muli, JK et al. 2018. Plant 6:8-15     Reference: April 28th, 2018
Gene Product: September 7th, 2018
Variation: August 19th, 2010
Gene Model: July 28th, 2016
5 months agotps8 terpene synthase8:
1.04 - 1.04
GRMZM2G038153
Block, AK et al. 2018. Planta pp.doi: 10.1007/s00425-018-2999-2     Reference: September 7th, 2018
Variation: May 29th, 2012
Gene Model: May 28th, 2012
5 months agotps1 terpene synthase1: possible plant defense gene
2.02
GRMZM2G049538
Block, AK et al. 2018. Planta pp.doi: 10.1007/s00425-018-2999-2     Reference: September 7th, 2018
Gene Product: May 28th, 2012
Variation: August 6th, 2013
Gene Model: May 28th, 2012
5 months agotps7 terpene synthase7:
 
GRMZM2G010356
Block, AK et al. 2018. Planta pp.doi: 10.1007/s00425-018-2999-2     Reference: September 7th, 2018
Gene Product: July 17th, 2016
Variation: May 28th, 2012
Gene Model: May 28th, 2012
5 months agoks1 kaurene synthase1:
 
GRMZM2G016922
Block, AK et al. 2018. Planta pp.doi: 10.1007/s00425-018-2999-2     Reference: September 7th, 2018
Gene Product: August 16th, 2012
Gene Model: October 27th, 2014
5 months agoks4 kaurene synthase4:
 
AC214360.3_FG001
Block, AK et al. 2018. Planta pp.doi: 10.1007/s00425-018-2999-2     Reference: September 7th, 2018
Gene Product: August 16th, 2012
Gene Model: October 27th, 2014
5 months agoyg3 yellow-green3: Dominant yellow green mutant; homozygous viable
 
GRMZM2G165521
Sorgini, CA. 2018. Utilizing maize genomics for pre-breeding insights     Reference: September 7th, 2018
Variation: September 7th, 2018
Gene Model: September 7th, 2018
5 months agoks6 kaurene synthase6:
 
GRMZM2G391312
Block, AK et al. 2018. Planta pp.doi: 10.1007/s00425-018-2999-2     Reference: September 7th, 2018
Gene Product: August 16th, 2012
Gene Model: December 2nd, 2015
5 months agotps17 terpene synthase17:
 
GRMZM2G010356
Block, AK et al. 2018. Planta pp.doi: 10.1007/s00425-018-2999-2     Reference: September 7th, 2018
Variation: July 17th, 2016
Gene Model: July 17th, 2016
5 months agocyp20 cytochrome P-450 20:
 
GRMZM2G139467
Block, AK et al. 2018. Planta pp.doi: 10.1007/s00425-018-2999-2     Reference: September 7th, 2018
Gene Product: September 26th, 2016
Gene Model: September 26th, 2016
5 months agotps21 terpene synthase21: has a role in fungal tolerance; involved in the producation of beta-selinene and beta-costic acid
 
GRMZM2G011151
Block, AK et al. 2018. Planta pp.doi: 10.1007/s00425-018-2999-2     Reference: September 7th, 2018
Gene Product: May 28th, 2012
Gene Model: September 22nd, 2017
5 months agocyp22 cytochrome P-450 22:
 
GRMZM2G067591
Block, AK et al. 2018. Planta pp.doi: 10.1007/s00425-018-2999-2     Reference: September 7th, 2018
Gene Product: February 26th, 2018
Gene Model: February 26th, 2018
5 months agosro5 similar to RCD one5: over-expression in transgenic Arabidopsis enhances abiotic stress resistance
 
GRMZM2G145236
Jiang, HH et al. 2018. Acta Physiol Plant 40:176   AT1G32230 (TAIR) Reference: September 7th, 2018
Gene Product: September 7th, 2018
Gene Model: August 10th, 2018
5 months agosro3 similar to RCD one3:
 
GRMZM2G011469
Jiang, HH et al. 2018. Acta Physiol Plant 40:176     Reference: September 7th, 2018
Gene Product: September 7th, 2018
Gene Model: August 10th, 2018
5 months agosro1 similar to RCD one1:
 
GRMZM2G122543
Jiang, HH et al. 2018. Acta Physiol Plant 40:176     Reference: September 7th, 2018
Gene Product: September 7th, 2018
Gene Model: August 10th, 2018
5 months agosro6 similar to RCD one6:
 
GRMZM2G177878
Jiang, HH et al. 2018. Acta Physiol Plant 40:176     Reference: September 7th, 2018
Gene Product: September 7th, 2018
Gene Model: August 10th, 2018
5 months agosro4 similar to RCD one4:
5.00
   Jiang, HH et al. 2018. Acta Physiol Plant 40:176     Reference: September 7th, 2018
Gene Product: September 7th, 2018
Variation: September 25th, 2007
5 months agotps6 terpene synthase6:
10.03
GRMZM2G127087
Block, AK et al. 2018. Planta pp.doi: 10.1007/s00425-018-2999-2     Reference: September 7th, 2018
Gene Product: September 3rd, 2008
Variation: May 28th, 2012
Gene Model: May 28th, 2012
5 months agoks3 kaurene synthase3: functionality inferred from expression data and sequence similarity (Song et al 2011; Nelissen et al 2012)
2.02
GRMZM2G093603
Block, AK et al. 2018. Planta pp.doi: 10.1007/s00425-018-2999-2     Reference: September 7th, 2018
Gene Product: August 16th, 2012
Gene Model: August 15th, 2012
5 months agobnlg1792  :
7.02
GRMZM2G024615
    Variation: September 1st, 2003
Gene Model: September 6th, 2018
5 months agophd30 PHD-transcription factor 30: similar to Arabidopsis PHD finger and bromo-adjacent homology domain-containing proteinLocus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
7.02
GRMZM2G091265
Yilmaz, A et al. 2009. Plant Physiol 149:171-180     Reference: May 12th, 2011
Variation: September 1st, 2003
Gene Model: September 6th, 2018
5 months agoumc1393  :
7.02
GRMZM2G052667
    Variation: September 1st, 2003
Gene Model: September 6th, 2018
5 months agoumc1787  :
7.02
GRMZM2G121189
    Variation: September 1st, 2003
Gene Model: September 6th, 2018
5 months agoAY109809  :
7.02
GRMZM2G035451
    Variation: July 29th, 2004
Gene Model: September 6th, 2018
5 months agoAY109968  :
7.02
GRMZM2G450488
    Variation: September 25th, 2007
Gene Model: September 6th, 2018
5 months agoras11C2 ras-related protein11C2: similar to Arabidopsis RAB GTPase homolog A1F
 
GRMZM2G124732
Zhang, JM et al. 2007. J Integr Plant Biol 49:1129-1141     Reference: January 12th, 2011
Variation: January 22nd, 2011
Gene Model: September 6th, 2018
5 months agommc0162  :
7.02
AC235546.1_FG001
    Variation: September 1st, 2003
Gene Model: September 5th, 2018
5 months agohtn1 Helminthosporium turcicum resistanceN1: formerly HtN; dominant Htn1 plants resistant to Exserohilum turcicum
8.06
GRMZM2G164612
Yang, P et al. 2018. New Phytol pp.doi: 10.1111/nph.15419   At1g66980 (TAIR)
LOC_Os01g49580 (MSU/TIGR)
Reference: September 5th, 2018
Gene Product: July 1st, 2015
Variation: July 14th, 2015
Gene Model: July 1st, 2015
5 months agoembp1 EM binding protein1 homologue: bZIP protein binds to O2 box; wheat EM orthologue
7.02
GRMZM2G095078
Busk, P and Pages, M. 1997. Protein binding to the abscisic acid-responsive element is independent of VIVIPAROUS1 in vivo. Plant Cell 9:2261-2270     Reference: September 1st, 2003
Gene Product: August 21st, 2018
Variation: September 5th, 2018
Gene Model: September 5th, 2018
5 months agoAY110473  :
7.02
GRMZM2G061562
    Variation: September 25th, 2007
Gene Model: September 5th, 2018
5 months agoAY110576  :
7.02
GRMZM2G032699
    Variation: July 29th, 2004
Gene Model: September 5th, 2018
5 months agopco103663  :
7.02
GRMZM2G125516
    Variation: September 25th, 2007
Gene Model: September 5th, 2018
5 months agocsu582  : similar to Arabidopsis Pyridoxal biosynthesis protein PDX1.3
7.00
GRMZM2G120652
    Variation: September 1st, 2003
Gene Model: September 4th, 2018
5 months agofnr2 ferredoxin NADP reductase2:
7.01
GRMZM2G011858
    Variation: October 9th, 2009
Gene Model: September 4th, 2018
5 months agoumc1426  :
7.00
GRMZM2G006071
    Variation: September 1st, 2003
Gene Model: September 4th, 2018
5 months agoumc1672  :
7.00
GRMZM2G044060
    Variation: September 1st, 2003
Gene Model: September 4th, 2018
5 months agommp18  :
7.01
GRMZM2G066290
    Variation: September 4th, 2018
Gene Model: September 4th, 2018
5 months agoAW308691  :
7.01
GRMZM2G542497
    Variation: July 29th, 2004
Gene Model: September 4th, 2018
5 months agomeg2 maternally expressed gene2: Maternally transmitted alleles preferentially expressed in endosperm
7.01
GRMZM2G094054
Xiong, Y et al. 2014. BMC Plant Biology 14:204     Reference: August 29th, 2014
Variation: August 29th, 2014
Gene Model: September 4th, 2018
5 months agomeg4 maternally expressed gene4: Maternally transmitted alleles preferentially expressed in endosperm
7.02
GRMZM2G137959
Han, ZX et al. 2018. Genetics 209:983-995     Reference: July 31st, 2018
Variation: October 25th, 2009
Gene Model: September 4th, 2018
5 months agoalt7 alanine aminotransferase7: bundle sheath alanine transasminase; see also alt8, alt9
7.00
GRMZM2G120563
Tausta, SL et al. 2014. J Exp Bot 65:3543-3555     Reference: November 20th, 2014
Gene Product: August 22nd, 2014
Gene Model: September 4th, 2018
5 months agophp20719a  :
10.04
GRMZM2G139797
Jia, SG et al. 2016. G3 6:2385-2395     Reference: August 10th, 2016
Variation: September 3rd, 2018
Gene Model: September 2nd, 2018
5 months agonpi105a  : Mapped major band to this site.
10.03
GRMZM2G143356
Caffrey, JJ et al. 1995. MNL 69:3-4     Reference: September 1st, 2003
Variation: September 1st, 2003
Gene Model: September 2nd, 2018
5 months agonpi114a  : Mapped major band to this site. npi114B was called npi202 but is listed as npi114B in the database.
8.01
GRMZM2G140885
Stuber, CW et al. 1992. Genetics 132:823-839     Reference: September 1st, 2003
Variation: September 1st, 2003
Gene Model: September 2nd, 2018
5 months agonpi264  :
10.04
GRMZM2G424348
Cowen, N et al. 1992. Theor Appl Genet 84:720-724     Reference: September 1st, 2003
Variation: September 1st, 2003
Gene Model: September 2nd, 2018
5 months agonpi352  :
7.04
GRMZM5G860235
    Variation: September 2nd, 2018
Gene Model: September 1st, 2018
5 months agophp06005  :
10.03
GRMZM2G571844
Matz, EC et al. 1992. MNL 66:107     Reference: September 1st, 2003
Variation: September 1st, 2003
Gene Model: September 2nd, 2018
5 months agobhlh86 bHLH-transcription factor 86: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
7.03
GRMZM5G818643
Yilmaz, A et al. 2009. Plant Physiol 149:171-180     Reference: May 12th, 2011
Variation: September 1st, 2003
Gene Model: September 2nd, 2018
5 months agoemp108 empty pericarp108: essential for kernel development; required for splicing of multiple introns and complex I biogenesis
 
GRMZM2G388778
Sun, F et al. 2018. Plant J pp.doi: 10.1111/tpj.14030   AT5G18390 (TAIR)
LOC_Os08g41380 (MSU/TIGR)
Reference: July 13th, 2018
Gene Product: December 27th, 2016
Variation: September 1st, 2018
Gene Model: July 13th, 2018
5 months agoemp18 empty pericarp18: mutants have an embryo-lethal phenotype; functions in mitochondrial atp6 and cox2 transcript editing
 
GRMZM2G471348
Li, X-L et al. 2018. New Phytol pp.doi: 10.1111/nph.15425     Reference: September 1st, 2018
Gene Product: December 27th, 2016
Variation: September 1st, 2018
Gene Model: September 1st, 2018
5 months agocry2 cryptochrome2:
2.04
GRMZM2G049549
Coles, N et al. 2010. Genetics 184:799-812     Reference: April 1st, 2010
Gene Product: August 31st, 2018
Variation: September 5th, 2014
Gene Model: September 5th, 2014
5 months agocry4 cryptochrome4:
4.05
       Gene Product: August 31st, 2018
5 months agomch1 maize CRY1 homolog1: Homolog to yeast 40S ribosomal protein S14 gene family (cDNA probe)
 
GRMZM5G805627
Larkin, JC et al. 1989. Genes Dev 3:500-509     Reference: September 1st, 2003
Gene Product: September 1st, 2003
Variation: October 14th, 2010
Gene Model: August 31st, 2018
5 months agomybr17 MYB-related-transcription factor 17: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
3.09
GRMZM2G071977
Yilmaz, A et al. 2009. Plant Physiol 149:171-180     Reference: May 12th, 2011
Variation: September 1st, 2003
Gene Model: August 31st, 2018
5 months agosnrkII8 SnRK2 serine threonine protein kinase8: salt tolerance expressed in Arabidopsis host (Vilela 2013)
 
GRMZM2G138861
Wu, QQ et al. 2018. J Integr Plant Biol pp.doi: 10.1111/jipb.12714     Reference: August 31st, 2018
Gene Product: April 14th, 2018
Variation: August 31st, 2018
Gene Model: February 11th, 2015
5 months agofkf1 flavin-binding kelch repeat f-box1: Involved in regulating the circadian clock and photoperiodic flowering
 
GRMZM2G107945
Li, B et al. 2018. Genome Res pp.doi: 10.1101/gr.229716.117     Reference: August 31st, 2018
Gene Product: July 25th, 2017
Gene Model: December 12th, 2017
5 months agocry3 cryptochrome3: a homolog of CRY2, encoding cryptochrome-2, a photoreceptor regulated by blue light and involved in floral initiation (Li et al., 2018)
 
GRMZM2G172152
Li, B et al. 2018. Genome Res pp.doi: 10.1101/gr.229716.117     Reference: August 31st, 2018
Gene Product: August 31st, 2018
Gene Model: August 31st, 2018
5 months agocry1 cryptochrome1:
5.05
GRMZM2G024739
    Gene Product: August 31st, 2018
Gene Model: August 31st, 2018
5 months agoact1 actin1: actin, one of six potential genes; genomic DNA clone; 3 introns); SSR phi115
8.03 - 8.04
   Righini, S et al. 2018. Plant Cell Environ pp.doi: 10.1111/pce.13428     Reference: August 30th, 2018
Gene Product: September 1st, 2003
Variation: September 4th, 2013
5 months agocdo202a(mcf)  : similar to Arabidopsis adenine nucleotide transporter 1
6.07
GRMZM2G067877
    Variation: August 30th, 2018
Gene Model: August 30th, 2018
5 months agobnlg1136a  :
6.07
GRMZM5G847466
    Variation: September 1st, 2003
Gene Model: August 30th, 2018
5 months agoumc1127  :
6.08 - 6.08
GRMZM2G412937
    Variation: September 1st, 2003
Gene Model: August 30th, 2018
5 months agoumc1653  :
6.07
GRMZM2G438895
    Variation: September 1st, 2003
Gene Model: August 30th, 2018
5 months agonpi113b  : Mapped minor band to this site.
2.08
GRMZM2G035985
    Variation: September 1st, 2003
Gene Model: August 30th, 2018
5 months agofnsii1 flavone synthase typeII1: Encodes a flavone synthase that is of the oxygen- and NADPH-dependent cytochrome P450 membrane-bound monooxygenase class
 
GRMZM2G148441
Righini, S et al. 2018. Plant Cell Environ pp.doi: 10.1111/pce.13428     Reference: August 30th, 2018
Gene Product: August 14th, 2015
Gene Model: August 14th, 2015
5 months agoufgt3 UDP-flavone-glycosyltransferase3:
 
GRMZM2G063550
Righini, S et al. 2018. Plant Cell Environ pp.doi: 10.1111/pce.13428     Reference: August 30th, 2018
Gene Product: August 30th, 2018
Gene Model: August 30th, 2018
5 months agotrh4 thioredoxin h homolog4:
 
GRMZM2G066612
Righini, S et al. 2018. Plant Cell Environ pp.doi: 10.1111/pce.13428     Reference: August 30th, 2018
Gene Product: September 1st, 2003
Gene Model: August 30th, 2018
5 months agobnlg1740  : similar to Arabidopsis Cytochrome b561/ferric reductase transmembrane protein family
6.07
GRMZM2G023133
    Variation: September 1st, 2003
Gene Model: August 29th, 2018
5 months agoumc1350  :
6.07
GRMZM2G038284
    Variation: September 1st, 2003
Gene Model: August 29th, 2018
5 months agoumc1296  : similar to Arabidopsis cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG4
6.07
GRMZM2G021406
    Variation: August 29th, 2018
Gene Model: August 29th, 2018
5 months agoumc1463  :
6.06
GRMZM2G010357
    Variation: September 1st, 2003
Gene Model: August 29th, 2018
5 months agoumc1490  : similar to Araidopsis double-stranded DNA-binding-like protein
6.07
GRMZM2G174741
    Variation: September 1st, 2003
Gene Model: August 29th, 2018
5 months agoumc62  : similar to Arabidopsis ribosomal protein L18ae-like protein
6.07
GRMZM2G022453
Rocheford, TR. 1994. Proc Annu Corn Sorghum Ind Res Conf 49:239-249     Reference: September 1st, 2003
Variation: August 29th, 2018
Gene Model: August 29th, 2018
5 months agoAY104289  :
6.07
GRMZM2G085849
    Variation: September 25th, 2007
Gene Model: August 29th, 2018
5 months agoAY105785  :
6.06
GRMZM2G176396
    Variation: March 21st, 2007
Gene Model: August 29th, 2018
5 months agoAY109797  : similar to Arabidopsis Ubiquitin-conjugating enzyme family protein
6.07
GRMZM2G085849
    Variation: July 29th, 2004
Gene Model: August 29th, 2018
5 months agoAY110400  :
6.07
GRMZM5G872417
    Variation: July 29th, 2004
Gene Model: August 29th, 2018
5 months agoras11C3 ras-related protein11C3:
 
GRMZM2G020661
Zhang, JM et al. 2007. J Integr Plant Biol 49:1129-1141     Reference: January 12th, 2011
Variation: January 24th, 2011
Gene Model: August 29th, 2018
5 months agoIDP148  :
6.06
GRMZM2G158526
    Variation: March 31st, 2005
Gene Model: August 29th, 2018
5 months agoapx5 Cytosolic ascorbate peroxidase5: leaf cDNA csu238, partial 5' sequence similar to plant ascorbate peroxidase
6.07
GRMZM2G093346
Baysdorfer, C. 1994. cDNA sequence submission to dbEST     Reference: September 1st, 2003
Gene Product: September 1st, 2003
Variation: August 10th, 2012
Gene Model: August 29th, 2018
5 months agoid1 indeterminate growth1: requires extended growth for flowering; vegetatively totipotent with gt1 and factors for perennialism
1.08
   Karl, JR. 2014. MNL 88:e14     Reference: August 28th, 2018
Gene Product: January 3rd, 2015
Variation: August 3rd, 2015
5 months agoubi7 ubiquitin-conjugating enzyme7:
6.05
GRMZM2G012052
van Nocker, S. 1998. Plant Physiol 116:1191     Reference: September 1st, 2003
Variation: September 1st, 2003
Gene Model: August 28th, 2018
5 months agolac2 laccase2:
6.05
GRMZM2G146152
Caparros-Ruiz, D et al. 2006. Plant Sci 171:217-225     Reference: March 31st, 2018
Gene Product: March 31st, 2018
Gene Model: August 28th, 2018
5 months agoras8A2 ras-related protein8A2:
 
GRMZM5G878008
Zhang, JM et al. 2007. J Integr Plant Biol 49:1129-1141     Reference: January 12th, 2011
Variation: January 20th, 2011
Gene Model: August 28th, 2018
5 months agome5 malic enzyme5:
6.05
GRMZM5G886257
Alvarez, CE et al. 2013. Photosynth Res 115:65-80     Reference: August 21st, 2014
Gene Product: August 21st, 2014
Variation: August 16th, 2011
Gene Model: August 27th, 2018
5 months agoumc1352a  :
6.05
GRMZM2G032896
    Variation: August 26th, 2018
Gene Model: August 27th, 2018
5 months agoumc1379  :
6.05
GRMZM2G117439
    Variation: September 1st, 2003
Gene Model: August 27th, 2018
5 months agoumc1388  :
6.05
GRMZM2G093325
    Variation: September 1st, 2003
Gene Model: August 27th, 2018
5 months agoumc1413  :
6.05
GRMZM2G030123
    Variation: September 1st, 2003
Gene Model: August 27th, 2018
5 months agonpi252  : similar to Arabidopsis carbon catabolite repressor protein 4-like 4
6.05
GRMZM2G054056
Senior, ML et al. 1996. MNL 70:50-54     Reference: September 1st, 2003
Variation: September 1st, 2003
Gene Model: August 27th, 2018
5 months agotor1 target of rapamycin1: similar to Arabidpsis FKBP12-rapamycin complex-associated proteinexpression is highly regulated during germination
6.05
GRMZM2G049342
Garcia, NS; Messing, J. 2017. Frontiers Plant Sci 8:1723     Reference: November 23rd, 2017
Gene Product: November 21st, 2017
Gene Model: August 27th, 2018
5 months agoAY110260  :
6.05
GRMZM2G319109
    Variation: September 25th, 2007
Gene Model: August 27th, 2018
5 months agokrp9 kinesin-related protein9: Is a member of MCAK family and may depolymerize microtubules per C. Lawrence.
6.05
GRMZM5G881464
Lawrence, CJ et al. 2002. J Mol Evol 54:42-53     Reference: September 1st, 2003
Gene Product: November 10th, 2017
Variation: September 1st, 2003
Gene Model: August 26th, 2018
5 months agoumc1114  :
6.05
GRMZM5G898274
    Variation: September 1st, 2003
Gene Model: August 26th, 2018
5 months agoumc1314  : similar to Arabidopsis Ras-related protein RABA2c
6.05
GRMZM2G061912
    Variation: September 1st, 2003
Gene Model: August 26th, 2018
5 months agovpp1 vacuolar proton pump homolog1: glucose-starved root tip cDNA closely similar to Oryza gene (TIGR match)
6.04
GRMZM2G148200
Wisniewski, J; Rogowsky, P. 2004. Plant Mol Biol. 56:325-337     Reference: July 28th, 2005
Gene Product: September 1st, 2003
Variation: September 1st, 2003
Gene Model: August 25th, 2018
5 months agoumc1796  :
6.04
GRMZM2G064382
    Variation: September 1st, 2003
Gene Model: August 25th, 2018
5 months agopip1b plasma membrane intrinsic protein1:
5.06
   Huanca-Mamani, W et al. Plant Omics J. 2018. 11:80-88     Reference: August 25th, 2018
Gene Product: September 1st, 2003
Variation: April 26th, 2016
5 months agocipk8 calcineurin B-like-interacting protein kinase8:
 
GRMZM2G383240
Tai, F, et al. 2016. Plant Cell, Tissue and Organ Culture (PCTOC). 124:459-469     Reference: June 5th, 2017
Gene Product: August 25th, 2018
Variation: June 2nd, 2017
Gene Model: June 2nd, 2017
5 months agovpp8 vacuolar proton pump8: low copy leaf cDNA csu37, similar to yeast ATPase subunit
7.04
GRMZM2G019999
Couee, I and Chevalier, C. 1996. Nucleotide submission to dbEST     Reference: September 1st, 2003
Gene Product: September 1st, 2003
Gene Model: August 25th, 2018
5 months agoglp1 germin-like protein1:
6.05
GRMZM2G064096
Fan, Z, et al. 2005. Biochem Biophys Res Commun. 331:1257-63     Reference: February 14th, 2006
Gene Product: December 24th, 2015
Variation: August 25th, 2018
Gene Model: August 24th, 2018
5 months agorte1 rotten ear1: mutants show distinct defects in vegetative and reproductive development, eventually causing widespread sterility in its tassel and ear.
1.05
GRMZM2G166159
Huanca-Mamani, W et al. Plant Omics J. 2018. 11:80-88     Reference: August 25th, 2018
Gene Product: June 24th, 2017
Variation: July 21st, 2014
Gene Model: July 19th, 2014
5 months agorte3 rotten ear3: phylogenetically related to Class II clade boron transporters
 
GRMZM2G051753
Huanca-Mamani, W et al. Plant Omics J. 2018. 11:80-88     Reference: August 25th, 2018
Gene Product: June 24th, 2017
Variation: June 24th, 2017
Gene Model: June 24th, 2017
5 months agocul2 cullin2:
 
GRMZM2G166694
Huanca-Mamani, W et al. Plant Omics J. 2018. 11:80-88     Reference: August 25th, 2018
Gene Product: May 10th, 2018
Gene Model: May 10th, 2018
5 months agonhx7 Na+/H+ antiporter 7: silicon up-regulates expression
 
GRMZM2G098494
Bosnic, P et al. 2018. Environ Exp Bot pp.doi: 10.1016/j.envexpbot.2018.08.018   AT1G14660 (TAIR) Reference: August 20th, 2018
Gene Product: August 25th, 2018
Gene Model: August 20th, 2018
5 months agovpp7 vacuolar proton pump7: SNP; NCBI defines as a vacuolar proton pump-like protein
 
GRMZM2G069095
Wisniewski, J; Rogowsky, P. 2004. Plant Mol Biol. 56:325-337     Reference: July 28th, 2005
Gene Product: September 1st, 2003
Gene Model: August 25th, 2018
5 months agonhx8 Na+/H+ antiporter 8: Salt inducable
 
GRMZM2G067747
Huanca-Mamani, W et al. Plant Omics J. 2018. 11:80-88   AT1G79610 (TAIR) Reference: August 25th, 2018
Gene Product: August 25th, 2018
Gene Model: August 25th, 2018
5 months agonhx5 Na+/H+ antiporter 5: shoot-specific and NaCl-specific expression.
7.05
GRMZM2G027851
Bosnic, P et al. 2018. Environ Exp Bot pp.doi: 10.1016/j.envexpbot.2018.08.018     Reference: August 20th, 2018
Gene Product: August 25th, 2018
Gene Model: August 20th, 2018
5 months agonhx1 Na+/H+ antiporter 1: root-specific and NaCl-specific expression.
 
   Zorb, C; Schubert, S. 2005. J Plant Physiol. 162:55-66     Reference: January 29th, 2010
Gene Product: August 25th, 2018
5 months agonhx2 Na+/H+ antiporter 2: shoot- and root-specific and NaCl-specific expression; predominant isoform under control conditions(mM NaCl).
 
GRMZM2G063492
Huanca-Mamani, W et al. Plant Omics J. 2018. 11:80-88     Reference: August 25th, 2018
Gene Product: August 25th, 2018
Gene Model: August 20th, 2018
5 months agonhx4 Na+/H+ antiporter 4: shoot-specific expression.
 
   Zorb, C; Schubert, S. 2005. J Plant Physiol. 162:55-66     Reference: January 29th, 2010
Gene Product: August 25th, 2018
5 months agobnlg2191  :
6.02
GRMZM2G047969
    Variation: September 1st, 2003
Gene Model: August 24th, 2018
5 months agoumc1105  :
6.04
GRMZM2G041258
    Variation: September 1st, 2003
Gene Model: August 24th, 2018
5 months agopgl2 polygalacturonase2: cDNA and genomic clones, sequence nearly identical to pgl1; one of 10-12 member gene family
6.03
GRMZM2G454608
Schnable, J; Freeling, M. 2011. PLoS One 6(3):e17855. doi:10.1371/journal.pone.0017855     Reference: September 27th, 2011
Gene Product: September 1st, 2003
Variation: March 10th, 2013
Gene Model: August 24th, 2018
5 months agopgl3 polygalacturonase3: cDNA and genomic clones; one of 10-12 member gene family
6.03
GRMZM2G160626
Barakate, A et al. 1993. J Mol Biol 229:797-801     Reference: September 1st, 2003
Gene Product: September 1st, 2003
Variation: September 1st, 2003
Gene Model: August 24th, 2018
5 months agokrp5 kinesin-related protein5:
6.04
GRMZM2G575566
Lawrence, CJ et al. 2002. J Mol Evol 54:42-53     Reference: September 1st, 2003
Gene Product: November 10th, 2017
Gene Model: August 24th, 2018
5 months agoAY104775  :
6.03
GRMZM2G106427
    Variation: September 25th, 2007
Gene Model: August 24th, 2018
5 months agopgl9 exopolygalacturonase9:
 
GRMZM2G418644
Schnable, J; Freeling, M. 2011. PLoS One 6(3):e17855. doi:10.1371/journal.pone.0017855     Reference: September 27th, 2011
Gene Product: September 1st, 2003
Gene Model: August 24th, 2018
6 months agoumc1257  :
6.02
GRMZM2G128485
    Variation: September 1st, 2003
Gene Model: August 23rd, 2018
6 months agoca2p4 CCAAT-HAP2-transcription factor4: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Su, HH et al. 2018. J Exp Bot pp.doi: 10.1093/jxb/ery299     Reference: August 23rd, 2018
Gene Product: August 9th, 2016
6 months agomch3 maize CRY1 homolog3: Homolog to yeast 40S ribosomal protein S14 gene familysimilar to Arabidopsis 40S ribosomal protein S14-3
 
GRMZM2G100462
    Variation: October 14th, 2010
Gene Model: August 23rd, 2018
6 months agocol20 C2C2-CO-like-transcription factor 20:
 
GRMZM2G414423
Su, HH et al. 2018. J Exp Bot pp.doi: 10.1093/jxb/ery299     Reference: August 23rd, 2018
Gene Product: June 18th, 2018
Gene Model: August 23rd, 2018
6 months agocchh6 Cys2His2 Zinc Finger6:
 
AC205250.3_FG004
Su, HH et al. 2018. J Exp Bot pp.doi: 10.1093/jxb/ery299     Reference: August 23rd, 2018
Gene Product: April 4th, 2017
Gene Model: August 23rd, 2018
6 months agoend1 early nodulin homolog1: endosperm cDNA 5C04A12 (uaz227), similar to soybean early nodulin cDNA
6.01
GRMZM2G014705
Schnable, J; Freeling, M. 2011. PLoS One 6(3):e17855. doi:10.1371/journal.pone.0017855     Reference: September 27th, 2011
Gene Product: September 1st, 2003
Variation: September 1st, 2003
Gene Model: August 22nd, 2018
6 months agobzip100 bZIP-transcription factor 100: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Zong, N et al. 2018. J Integrative Agriculture doi: 10.1016/S2095-3119(18)61947-1     Reference: May 18th, 2018
Gene Product: August 21st, 2018
6 months agobzip4 bZIP-transcription factor 4: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Ma, HZ et al. 2018. Plant Physiol pp.doi: 10.1104/pp.18.00436     Reference: August 21st, 2018
Gene Product: August 21st, 2018
Variation: August 21st, 2018
6 months agofea4 fasciated ear4: Mutants are semidwarfed with fasciated ears and tassels as well as greatly enlarged vegetative and inflorescence meristems.
 
   Wu, QY et al. 2018. Curr Opin Plant Biol 45:26-35     Reference: May 21st, 2018
Gene Product: August 21st, 2018
Variation: July 7th, 2017
6 months agobzip160 bZIP-transcription factor 60: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Yilmaz, A et al. 2009. Plant Physiol 149:171-180   AT1G75390 (TAIR)
LOC_Os02g03960 (MSU/TIGR)
Reference: May 12th, 2011
Gene Product: August 21st, 2018
6 months agoumc1444  :
6.01
GRMZM2G473788
    Variation: September 1st, 2003
Gene Model: August 20th, 2018
6 months agoubi2 ubiquitin2: genomic sequence encodes 7 contiguous ubiquitin monomers; transcript specific probe
4.09
GRMZM2G419891
Bosnic, P et al. 2018. Environ Exp Bot pp.doi: 10.1016/j.envexpbot.2018.08.018     Reference: August 20th, 2018
Gene Product: September 1st, 2003
Variation: November 18th, 2014
Gene Model: August 7th, 2014
6 months agocipk9 calcineurin B-like-interacting protein kinase9: silicon up-regulates expression
 
GRMZM2G330049
Bosnic, P et al. 2018. Environ Exp Bot pp.doi: 10.1016/j.envexpbot.2018.08.018   AT5G10930 (TAIR) Reference: August 20th, 2018
Gene Product: May 13th, 2014
Gene Model: August 20th, 2018
6 months agowox3a WUSCHEL homeobox 3A: embryonic transcription factor; expression in embryonic leaf similar to wox3b, but distinct from ns1/ns2 also in the wox3 gene family (Nardmann et al 2007)
6.01
GRMZM2G122537
Nardmann, J et al. 2007. Mol Biol Evol 24:2474-2484     Reference: August 15th, 2017
Gene Product: August 25th, 2017
Variation: August 19th, 2018
Gene Model: August 18th, 2018
6 months agoploc1 plastocyanin homolog1: leaf cDNA csu257, similar to plastocyanin
6.01
GRMZM2G071450
Baysdorfer, C. 1994. cDNA sequence submission to dbEST     Reference: September 1st, 2003
Gene Product: September 1st, 2003
Variation: August 18th, 2018
Gene Model: August 19th, 2018
6 months agoumc1606  :
6.01
GRMZM2G301803
    Variation: September 1st, 2003
Gene Model: August 18th, 2018
6 months agobnl6.29a  :
6.01
GRMZM2G381076
McMullen, MD and Louie, R. 1989. Mol Plant-Microbe Interact 2:309-314     Reference: September 1st, 2003
Variation: September 1st, 2003
Gene Model: August 18th, 2018
6 months agoumc2311  :
6.01
GRMZM2G036908
    Variation: September 25th, 2007
Gene Model: August 18th, 2018
6 months agobnlg161b  :
6.00
       Variation: August 17th, 2018
6 months agoppr5 pentatricopeptide repeat 5: stabilizes the chloroplast unspliced trnG precursor
4.08
GRMZM2G025409
Rojas, M et al. 2018. Nucl Acid Res pp.doi: 10.1093/nar/gky737   AT4G39620 (TAIR)
LOC_Os02g51480 (MSU/TIGR)
Os02g0750400 (Gramene)
Reference: August 16th, 2018
Gene Product: September 15th, 2012
Variation: August 5th, 2011
Gene Model: July 14th, 2011
Recommended by Alice Barkan:
November 11th, 2008
6 months agol15 luteus15: like l4; lethal yellow seedling; chloroplast mRNA processing.Chloroplast PPR protein. Activates atpH translation. Stabilizes atpH and psaJ RNA termini. Binds atpI-atpH and psaJ-rpl33 intergenic regions. (A. Barkan, 2015)
6.02 - 6.03
GRMZM2G177169
Rojas, M et al. 2018. Nucl Acid Res pp.doi: 10.1093/nar/gky737   AT2G18940 (TAIR)
LOC_Os05g19380 (MSU/TIGR)
Os05g0275000 (Gramene)
Reference: August 16th, 2018
Gene Product: December 30th, 2015
Variation: November 7th, 2012
Gene Model: November 6th, 2012
6 months agocps1 chloroplast protein synthesis1: Chloroplast protein synthesis 1: chloroplast cysteinyl-tRNA synthetase. (A. Barkan, 2015)reduced levels of RUBISCO and all thylakoid membrane complexes; unaltered chloroplast mRNA; decreased chloroplast polysomes
1.06 - 1.12
GRMZM2G156565
Rojas, M et al. 2018. Nucl Acid Res pp.doi: 10.1093/nar/gky737     Reference: August 16th, 2018
Gene Product: October 3rd, 2011
Variation: September 15th, 2011
Gene Model: September 6th, 2011
6 months agopgr3 proton gradient regulation3 homolog: Ortholog of Arabidopsis PGR3. Chloroplast PPR protein that stabilizes 5'-end of petL RNA and is required for accumulation of the thylakoid NDH complex. Global protein deficiencies imply additional functions in maize. (A. Barkan, 2015)Ortholog of Arabidopsis PGR3, a PPR protein that stabilizes 5'-end of cp petL RNA and is required for NDH accumulation. Additional functions in maize, with more global effect on accumulation of cp complexes.
 
GRMZM2G372632
Rojas, M et al. 2018. Nucl Acid Res pp.doi: 10.1093/nar/gky737   AT4G31850 (TAIR)
LOC_Os10g28600 (MSU/TIGR)
Reference: August 16th, 2018
Gene Product: December 27th, 2016
Variation: December 30th, 2015
Gene Model: February 17th, 2015
6 months agopip2a plasma membrane intrinsic protein2:
2.03
   Vajpai, M et al. 2018. Sci. Rep. 8:12055     Reference: August 15th, 2018
Gene Product: September 1st, 2003
Variation: March 18th, 2013
6 months agopza01735  :
2.06
       Gene Product: August 12th, 2018
6 months agoln1 linoleic acid1: lower ratio of oleate to linoleate in kernelembryo oil content and composition,cloned by chromosome walk to high oil QTL; maybe allele of ln1 (Zheng 2008)
6.04 - 6.04
GRMZM2G169089
Yan, BW et al. 2018. Genome doi: 10.1139/gen-2018-002     Reference: August 11th, 2018
Gene Product: August 12th, 2018
Variation: August 16th, 2014
Gene Model: August 16th, 2014
6 months agodgati2 diacylglycerol acyltransferase-typeI2:
 
GRMZM2G130749
Yan, BW et al. 2018. Genome doi: 10.1139/gen-2018-002     Reference: August 11th, 2018
Gene Product: August 12th, 2018
Gene Model: July 23rd, 2018
6 months agodgatii1 diacylglycerol acyltransferase-typeII1:
 
GRMZM2G042356
Yan, BW et al. 2018. Genome doi: 10.1139/gen-2018-002     Reference: August 11th, 2018
Gene Product: August 12th, 2018
Gene Model: August 11th, 2018
6 months agodgatii2 diacylglycerol acyltransferase-typeII2:
 
GRMZM2G050641
Yan, BW et al. 2018. Genome doi: 10.1139/gen-2018-002     Reference: August 11th, 2018
Gene Product: August 12th, 2018
Gene Model: August 11th, 2018
6 months agodgatiii1 diacylglycerol acyltransferase-typeIII1:
 
GRMZM2G122943
Yan, BW et al. 2018. Genome doi: 10.1139/gen-2018-002     Reference: August 11th, 2018
Gene Product: August 12th, 2018
Gene Model: August 11th, 2018
6 months agobhlh36 bHLH-transcription factor 36: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Yilmaz, A et al. 2009. Plant Physiol 149:171-180     Reference: May 12th, 2011
Variation: August 9th, 2018
6 months agocyp7 cytochrome P450 7: single copy cDNA (unpublished)
3.05
GRMZM2G021436
Jameson, N et al. 2008. Plant Mol Biol 67:295-304     Reference: March 5th, 2010
Gene Product: September 26th, 2016
Variation: February 15th, 2014
Gene Model: August 7th, 2018
6 months agogbss1b granule-bound starch synthase1b:
 
GRMZM2G008263
Zhao, LX et al. 2018. Plant Physiol Biochem 130:493-500     Reference: August 7th, 2018
Gene Product: June 4th, 2008
Variation: August 4th, 2011
Gene Model: November 20th, 2014
6 months agobnl12.30a  :
8.06
GRMZM2G015735
Grant, D et al. 1993. MNL 67:55-61     Reference: September 1st, 2003
Variation: September 1st, 2003
Gene Model: August 7th, 2018
6 months agopsbA (cp)  :
 
   Chotewutmontri, P; Barkan, A. 2018. PLoS Genetics 14:e1007555     Reference: August 7th, 2018
Gene Product: September 1st, 2003
6 months agomc1 mucronate1: dominant Mc1 kernels have opaque endospermendosperm-specific protein cDNA
2.06
GRMZM2G060429
Mainieri, D et al. 2018. J Exp Bot pp.doi: 10.1093/jxb/ery287/5063680     Reference: August 4th, 2018
Gene Product: September 17th, 2010
Variation: September 16th, 2010
Gene Model: August 4th, 2018
6 months agolhcb1 light harvesting chlorophyll a/b binding protein1: Mapped by Wright and Helentjaris (1988).
3.09
GRMZM2G104549
Stroud, LK; McGinnis, K. 2017. Plant Direct. DOI: 10.1002/pld3.19     Reference: October 21st, 2017
Gene Product: January 8th, 2005
Gene Model: August 3rd, 2018
6 months agofdx5 ferredoxin5: leaf protein, cDNA clone, distinct amino acid sequence compared to other ferredoxins, gene specific probe (aka pfd5)
 
GRMZM2G122327
Schnable, J; Freeling, M. 2011. PLoS One 6(3):e17855. doi:10.1371/journal.pone.0017855     Reference: September 27th, 2011
Gene Product: September 1st, 2003
Variation: August 3rd, 2018
Gene Model: August 1st, 2018
6 months agobnlg1893  :
2.09
GRMZM2G444543
    Variation: September 1st, 2003
Gene Model: August 2nd, 2018
6 months agow*-6577 white candidate 6577:
1.06 - 1.12
   MGCSC. 1972. Unpublished mimeographed notes     Reference: September 1st, 2003
Variation: August 2nd, 2018
6 months agocb2 crossbanded2: (was cb*-N652B) green seedling with yellowish white diurnal crossbands
2.02 - 2.03
   Coe, E. 2006. MNL 80:7     Reference: July 25th, 2006
Variation: August 2nd, 2018
6 months agoj*-5828 japonica*-5828:
1.00 - 1.12
       Variation: August 2nd, 2018
6 months agoagpll2 ADP glucose pyrophosphorylase large subunit leaf2:
 
GRMZM2G144002
Boehlein, S et al. 2018. Plant J pp.doi: 10.1111/tpj.14053     Reference: August 1st, 2018
Gene Product: January 3rd, 2014
Gene Model: January 7th, 2014
6 months agoagp1 ADP glucose pyrophosphorylase small subunit embryo 1: embryo cDNA that hybridizes to endosperm transcripts, distinct from sh2 and bt2 but most similar to the bt2 gene product
2.06
GRMZM2G106213
Boehlein, S et al. 2018. Plant J pp.doi: 10.1111/tpj.14053     Reference: August 1st, 2018
Gene Product: January 3rd, 2014
Variation: November 4th, 2014
Gene Model: November 4th, 2014
6 months agohox1 homeobox1: cDNA Zmhox1a, meristem specific, nuclear, protein product binds to feedback control element of sh1 promoter; SSR's umc1309, umc1343
8.05
GRMZM2G136369
Han, ZX et al. 2018. Genetics 209:983-995     Reference: July 31st, 2018
Gene Product: September 1st, 2003
Variation: June 26th, 2014
Gene Model: June 25th, 2014
6 months agoscmv1 resistance to sugarcane mosaic virus1: resistance requires dominant factors Scm1 and Scm2; resistance in various inbreds is concordant for SCMV and MDMV, yet recombinants of Scm1 occur with the NOR, whereas none were found for Mdm1 by Simcox et al. (1995)
6.00 - 6.01
GRMZM2G014055
Redinbaugh, MG; Stewart, LR. 2018. Annu Rev Virol. doi: 10.1146/annurev-virology-092917-043413     Reference: July 31st, 2018
Gene Product: September 1st, 2003
Variation: June 29th, 2005
Gene Model: September 7th, 2017
6 months agogl6 glossy6: like gl1, but seedling leaf surface bright green instead of bluish
3.05 - 3.05
GRMZM2G139786
Li, L et al. 2018. bioRxiv preprint pp.doi: 10.1101/378687     Reference: July 28th, 2018
Gene Product: July 28th, 2018
Variation: July 28th, 2018
Gene Model: July 28th, 2018
6 months agobnlg108  :
2.04
GRMZM2G151021
    Variation: September 1st, 2003
Gene Model: July 27th, 2018
6 months agoumc2403  :
2.02
GRMZM2G106413
    Variation: February 23rd, 2010
Gene Model: July 27th, 2018
6 months agoldp1 luminidependens protein1: single copy leaf cDNA, csu838, similar to Arabidopsis luminidependens protein which regulates floral induction
3.05
GRMZM2G106613
Cui, ZH et al. 2018. Theor Appl Genet pp.doi: 10.1007/s00122-018-3142-2     Reference: July 26th, 2018
Variation: April 28th, 2007
Gene Model: August 13th, 2014
6 months agoprp3 pathogenesis-related protein3:
4.02
GRMZM2G117989
Bravo, J; Campo, S; Murillo, I; Coca, M; Segundo, BS. 2003. Plant Mol Biol. 52:745-749     Reference: October 15th, 2003
Gene Product: July 25th, 2018
Gene Model: December 24th, 2015
6 months agoesr6 embryo surrounding region6: transcript specific to embryo surrounding region near basal endosperm transfer layer
4.09
GRMZM2G048353
Dowd, P; Johnson, ET. 2018. Agri Gene 9:16-23     Reference: July 25th, 2018
Gene Product: July 25th, 2018
Variation: January 5th, 2016
Gene Model: January 5th, 2016
6 months agohagtf3 GNAT-transcription factor 3: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
1.08
GRMZM2G131618
Yilmaz, A et al. 2009. Plant Physiol 149:171-180     Reference: May 12th, 2011
Gene Product: January 4th, 2018
Variation: July 25th, 2018
Gene Model: July 25th, 2018
6 months agoprp7 pathogenesis-related protein7:
1.03
GRMZM2G112524
Xie, Y-R et al. 2010. J Plant Physiol 167:121-130     Reference: October 1st, 2017
Gene Product: July 25th, 2018
Gene Model: September 30th, 2017
6 months agoccd8 carotenoid cleavage dioxygenase8: Mutants have mild branching, short stature, small ear size, and narrow-stalk
 
GRMZM2G446858
Zhu, X-M et al. 2018. Frontiers Plant Sci 9:966     Reference: July 25th, 2018
Gene Product: September 20th, 2012
Variation: September 21st, 2012
Gene Model: September 20th, 2012
6 months agodef2 defensin-like protein2:
 
GRMZM2G368861
Dowd, P; Johnson, ET. 2018. Agri Gene 9:16-23     Reference: July 25th, 2018
Gene Product: July 25th, 2018
Gene Model: June 10th, 2016
6 months agodef4 defensin-like protein4:
 
GRMZM2G153488
Dowd, P; Johnson, ET. 2018. Agri Gene 9:16-23     Reference: July 25th, 2018
Gene Product: July 25th, 2018
Gene Model: September 16th, 2017
6 months agoprp6 pathogenesis-related protein6: encoded protein exerted broad spectrum antifungal activity
 
GRMZM2G112488
Castano-Duque, L et al. 2018. J Chem Ecol pp.doi: 10.1007/s10886-018-0972-y     Reference: June 22nd, 2018
Gene Product: July 25th, 2018
Gene Model: September 30th, 2017
6 months agodef3 defensin-like protein3: Maize callus containing the NC300 allele was more resistant to maize pests than GUS callus.
 
GRMZM2G149869
Dowd, P; Johnson, ET. 2018. Agri Gene 9:16-23     Reference: July 25th, 2018
Gene Product: July 25th, 2018
Variation: July 25th, 2018
Gene Model: July 25th, 2018
6 months agodef1 defensin-like protein1:
10.03
GRMZM2G368890
Dowd, P; Johnson, ET. 2018. Agri Gene 9:16-23     Reference: July 25th, 2018
Gene Product: July 25th, 2018
Gene Model: June 10th, 2016
6 months agouce12 ubiquitin conjugating enzyme12:
8.03
GRMZM2G015287
Zhu, X-M et al. 2018. Frontiers Plant Sci 9:966     Reference: July 25th, 2018
Variation: March 31st, 2005
Gene Model: July 25th, 2018
7 months agoyab10 yabby homolog10:
1.07
   Stitzer, MC; Ross-Ibarra, J. 2018. New Phytol pp.doi: 10.1111/nph.15350     Reference: July 24th, 2018
Gene Product: October 16th, 2015
Variation: March 23rd, 2009
Recommended by Marty Sachs:
March 7th, 2007
7 months agotu1 tunicate1: dominant Tu1 ears develop long glumes enclosing individual kernels; tassels develop large, coarse glumes and sex reversal; both inflorescences become grossly vegetative and sterile in homozygotes
4.08 - 4.08
GRMZM2G370777
Stitzer, MC; Ross-Ibarra, J. 2018. New Phytol pp.doi: 10.1111/nph.15350     Reference: July 24th, 2018
Gene Product: June 12th, 2012
Variation: February 3rd, 2011
Gene Model: May 9th, 2012
7 months agonot1 neighbor of tga1: compared to tga1, expressed much higher in maize than teosinte; INDEL probe (Preston et al 2011)
 
AC233751.1_FG002
Stitzer, MC; Ross-Ibarra, J. 2018. New Phytol pp.doi: 10.1111/nph.15350     Reference: July 24th, 2018
Gene Product: December 18th, 2014
Variation: May 7th, 2015
Gene Model: October 28th, 2011
7 months agobhlh81 bHLH-transcription factor 81: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Yilmaz, A et al. 2009. Plant Physiol 149:171-180     Reference: May 12th, 2011
Variation: July 24th, 2018
7 months agozfl2 Zea floricaula leafy2: zfl1 and zfl2 double mutants exhibit a disruption of floral organ identity and patterning, as well as defects in inflorescence architecture and in the vegetative to reproductive phase transition.
2.02
   Stitzer, MC; Ross-Ibarra, J. 2018. New Phytol pp.doi: 10.1111/nph.15350     Reference: July 24th, 2018
Variation: October 9th, 2014
7 months agosos1 Suppressor of sessile spikelets1: dominant Sos1 suppresses sessile spikelets in ear primordia and in tassel; reduced tassel branching - contrasts to teosinte ears, where the pedicellate rather than the sessile spikelet is lacking (compare pd1 pd2, unpaired rows due to failure of pedicillate spikelets)
4.02
   Stitzer, MC; Ross-Ibarra, J. 2018. New Phytol pp.doi: 10.1111/nph.15350     Reference: July 24th, 2018
Variation: September 1st, 2003
7 months agozag6 agamous-like6: Encodes a MADS-box transcription factor homologous to SUPPRESSOR OF OVEREXPRESSION OF CONSTANS 1 that affects flowering time in Arabidopsis.
 
GRMZM2G026223
Stitzer, MC; Ross-Ibarra, J. 2018. New Phytol pp.doi: 10.1111/nph.15350     Reference: July 24th, 2018
Variation: June 9th, 2014
Gene Model: June 9th, 2014
7 months agoyab12 C2C2-YABBY-transcription factor 12: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
GRMZM2G085873
Stitzer, MC; Ross-Ibarra, J. 2018. New Phytol pp.doi: 10.1111/nph.15350     Reference: July 24th, 2018
Gene Product: October 16th, 2015
Gene Model: October 16th, 2015
7 months agoyab6 C2C2-YABBY-transcription factor 6: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
GRMZM2G074124
Stitzer, MC; Ross-Ibarra, J. 2018. New Phytol pp.doi: 10.1111/nph.15350     Reference: July 24th, 2018
Gene Product: October 16th, 2015
Gene Model: July 3rd, 2012
7 months agocopt1 copper transporter1:
 
GRMZM2G003179
Wang, HL et al. 2018. PLoS One 13:e0199081     Reference: July 24th, 2018
Gene Product: July 24th, 2018
Gene Model: July 24th, 2018
7 months agocopt2 copper transporter2:
 
GRMZM2G042412
Wang, HL et al. 2018. PLoS One 13:e0199081     Reference: July 24th, 2018
Gene Product: July 24th, 2018
Gene Model: July 24th, 2018
7 months agocopt3 copper transporter3:
 
GRMZM2G317696
Wang, HL et al. 2018. PLoS One 13:e0199081     Reference: July 24th, 2018
Gene Product: July 24th, 2018
Gene Model: July 24th, 2018
7 months agoasg62  :
1.07
GRMZM2G379237
Grant, D et al. 1993. MNL 67:55-61     Reference: September 1st, 2003
Variation: February 15th, 2017
Gene Model: July 24th, 2018
7 months agoumc1076  :
1.05
GRMZM2G152526
    Variation: September 1st, 2003
Gene Model: July 23rd, 2018
7 months agoole1 oleosin1: major protein from lipid bodies, cDNA and genomic clones; SSR umc1185
2.03
   Schnable, J; Freeling, M. 2011. PLoS One 6(3):e17855. doi:10.1371/journal.pone.0017855     Reference: September 27th, 2011
Gene Product: July 23rd, 2018
Variation: February 20th, 2015
7 months agortcs1 rootless concerning crown and seminal roots1: root system reduced solely to a primary root yet plants can be carried to seed; cyclin cDNAs absent; naphthalene acetic acid induces adventitious roots
1.02
GRMZM2G092542
Bray, AL; Topp, CN. 2018. Plant Cell Physiol pp.doi: 10.1093/pcp/pcy141     Reference: July 19th, 2018
Gene Product: October 5th, 2009
Variation: October 5th, 2009
Gene Model: July 23rd, 2013
7 months agoslr1 short lateral root1:
 
   Bray, AL; Topp, CN. 2018. Plant Cell Physiol pp.doi: 10.1093/pcp/pcy141     Reference: July 19th, 2018
Variation: October 5th, 2009
7 months agoslr2 short lateral root2:
 
   Bray, AL; Topp, CN. 2018. Plant Cell Physiol pp.doi: 10.1093/pcp/pcy141     Reference: July 19th, 2018
Variation: October 5th, 2009
7 months agort1 rootless1: secondary roots few or absent
3.04
   Bray, AL; Topp, CN. 2018. Plant Cell Physiol pp.doi: 10.1093/pcp/pcy141     Reference: July 19th, 2018
Variation: September 1st, 2003
7 months agolrt1 lateral rootless1: few lateral root primordia form in primary and seminal roots, none proliferate; no response to naphthalene acetic acid or indole acetic acid; responds to indole butyric acid and to S-nitroso-N-acetylpenicillamine, a nitric oxide (NO) donor (Schlicht et al 2013)
2.00 - 2.03
   Bray, AL; Topp, CN. 2018. Plant Cell Physiol pp.doi: 10.1093/pcp/pcy141     Reference: July 19th, 2018
Variation: September 1st, 2003
7 months agolrp1 lateral root primordia1: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Bray, AL; Topp, CN. 2018. Plant Cell Physiol pp.doi: 10.1093/pcp/pcy141   AT5G12330 (TAIR) Reference: July 19th, 2018
Gene Product: April 27th, 2015
7 months agorth1 roothair defective1: roothairs do not elongate in rth1 homozygotes; plants are dwarfed and appear nutrient deficient; genomic sequence
1.09
   Bray, AL; Topp, CN. 2018. Plant Cell Physiol pp.doi: 10.1093/pcp/pcy141     Reference: July 19th, 2018
Variation: April 2nd, 2007
7 months agorth3 roothair defective3: like rth1, but "stocking cap" roothair initials under electron microscope
1.03
   Bray, AL; Topp, CN. 2018. Plant Cell Physiol pp.doi: 10.1093/pcp/pcy141     Reference: July 19th, 2018
Variation: June 30th, 2012
7 months agorboh1 respiratory burst oxidase1: mutant displays defects in root hair initiation and elongation manifested by a reduced density and length of root hairs.
3.06
GRMZM2G426953
Bray, AL; Topp, CN. 2018. Plant Cell Physiol pp.doi: 10.1093/pcp/pcy141     Reference: July 19th, 2018
Gene Product: July 15th, 2013
Variation: June 7th, 2014
Gene Model: July 2nd, 2013
7 months agortcl1 RTCS-like1: homologous to rtcs1
9.07
AC149818.2_FG009
Bray, AL; Topp, CN. 2018. Plant Cell Physiol pp.doi: 10.1093/pcp/pcy141     Reference: July 19th, 2018
Variation: January 20th, 2016
Gene Model: May 18th, 2012
7 months agorul1 rum1-like1:
 
GRMZM2G163848
Bray, AL; Topp, CN. 2018. Plant Cell Physiol pp.doi: 10.1093/pcp/pcy141     Reference: July 19th, 2018
Variation: November 18th, 2011
Gene Model: November 17th, 2011
7 months agorth6 roothairless6: mutant roothairs do not elongate; encodes a D-type cellulose synthase
 
GRMZM2G436299
Bray, AL; Topp, CN. 2018. Plant Cell Physiol pp.doi: 10.1093/pcp/pcy141     Reference: July 19th, 2018
Gene Product: October 7th, 2016
Variation: October 7th, 2016
Gene Model: October 7th, 2016
7 months agoumc1153  :
5.09
GRMZM2G133764
    Variation: September 1st, 2003
Gene Model: July 16th, 2018
7 months agonbcs18 nucleobase:cation symporter18:
7.02
GRMZM2G414813
Chai, WB et al. 2018. Frontiers Plant Sci 9:856     Reference: July 14th, 2018
Gene Product: July 14th, 2018
Gene Model: July 14th, 2018
7 months agolpe1 leaf permease1: pale green (lpe1-m1 mutable) under high light, green in low light; defective chloroplasts
1.09
GRMZM5G858417
Chai, WB et al. 2018. Frontiers Plant Sci 9:856     Reference: July 14th, 2018
Gene Product: September 1st, 2003
Variation: March 29th, 2012
Gene Model: February 17th, 2015
7 months agoumc1792  :
5.08
GRMZM5G852886
    Variation: September 1st, 2003
Gene Model: July 14th, 2018
7 months agonbcs1 nucleobase:cation symporter1:
1.05
GRMZM2G041050
Chai, WB et al. 2018. Frontiers Plant Sci 9:856     Reference: July 14th, 2018
Gene Product: July 14th, 2018
Gene Model: December 17th, 2016
7 months agonbcs15 nucleobase:cation symporter15:
5.00
GRMZM2G420823
Chai, WB et al. 2018. Frontiers Plant Sci 9:856     Reference: July 14th, 2018
Gene Product: July 14th, 2018
Variation: September 1st, 2003
Gene Model: June 14th, 2018
7 months agonbcs2 nucleobase:cation symporter2: similar to Arabidopsis nucleobase-ascorbate transporter 6
1.07
GRMZM2G115635
Chai, WB et al. 2018. Frontiers Plant Sci 9:856     Reference: July 14th, 2018
Gene Product: July 14th, 2018
Gene Model: September 7th, 2017
7 months agonbcs5 nucleobase:cation symporter5:
2.06
GRMZM2G100484
Chai, WB et al. 2018. Frontiers Plant Sci 9:856     Reference: July 14th, 2018
Gene Product: July 14th, 2018
Variation: July 29th, 2004
Gene Model: January 31st, 2018
7 months agoAY110182  :
5.08
GRMZM2G017923
    Variation: July 29th, 2004
Gene Model: July 14th, 2018
7 months agoAY110413  :
5.08
GRMZM2G089466
    Variation: July 29th, 2004
Gene Model: July 14th, 2018
7 months agonbcs4 nucleobase:cation symporter4:
 
GRMZM2G045781
Chai, WB et al. 2018. Frontiers Plant Sci 9:856     Reference: July 14th, 2018
Gene Product: July 14th, 2018
Gene Model: July 14th, 2018
7 months agonbcs6 nucleobase:cation symporter6:
 
GRMZM2G171880
Chai, WB et al. 2018. Frontiers Plant Sci 9:856     Reference: July 14th, 2018
Gene Product: July 14th, 2018
Gene Model: July 14th, 2018
7 months agonbcs7 nucleobase:cation symporter7:
 
   Chai, WB et al. 2018. Frontiers Plant Sci 9:856     Reference: July 14th, 2018
Gene Product: July 14th, 2018
7 months agonbcs8 nucleobase:cation symporter8:
 
GRMZM2G068220
Chai, WB et al. 2018. Frontiers Plant Sci 9:856     Reference: July 14th, 2018
Gene Product: July 14th, 2018
Gene Model: July 14th, 2018
7 months agonbcs9 nucleobase:cation symporter9:
 
GRMZM2G119970
Chai, WB et al. 2018. Frontiers Plant Sci 9:856     Reference: July 14th, 2018
Gene Product: July 14th, 2018
Gene Model: July 14th, 2018
7 months agonbcs10 nucleobase:cation symporter10:
 
GRMZM2G085420
Chai, WB et al. 2018. Frontiers Plant Sci 9:856     Reference: July 14th, 2018
Gene Product: July 14th, 2018
Gene Model: July 14th, 2018
7 months agonbcs11 nucleobase:cation symporter11:
 
GRMZM2G358791
Chai, WB et al. 2018. Frontiers Plant Sci 9:856     Reference: July 14th, 2018
Gene Product: July 14th, 2018
Gene Model: July 14th, 2018
7 months agonbcs12 nucleobase:cation symporter12:
 
GRMZM2G080387
Chai, WB et al. 2018. Frontiers Plant Sci 9:856     Reference: July 14th, 2018
Gene Product: July 14th, 2018
Gene Model: July 14th, 2018
7 months agonbcs13 nucleobase:cation symporter13:
 
   Chai, WB et al. 2018. Frontiers Plant Sci 9:856     Reference: July 14th, 2018
Gene Product: July 14th, 2018
7 months agonbcs14 nucleobase:cation symporter14:
 
GRMZM2G027608
Chai, WB et al. 2018. Frontiers Plant Sci 9:856     Reference: July 14th, 2018
Gene Product: July 14th, 2018
Gene Model: July 14th, 2018
7 months agonbcs17 nucleobase:cation symporter17:
 
GRMZM2G020580
Chai, WB et al. 2018. Frontiers Plant Sci 9:856     Reference: July 14th, 2018
Gene Product: July 14th, 2018
Gene Model: July 14th, 2018
7 months agonbcs19 nucleobase:cation symporter19:
 
GRMZM2G406315
Chai, WB et al. 2018. Frontiers Plant Sci 9:856     Reference: July 14th, 2018
Gene Product: July 14th, 2018
Gene Model: July 14th, 2018
7 months agonbcs20 nucleobase:cation symporter20:
 
GRMZM5G802881
Chai, WB et al. 2018. Frontiers Plant Sci 9:856     Reference: July 14th, 2018
Gene Product: July 14th, 2018
Gene Model: July 14th, 2018
7 months agonbcs21 nucleobase:cation symporter21:
 
GRMZM2G136872
Chai, WB et al. 2018. Frontiers Plant Sci 9:856     Reference: July 14th, 2018
Gene Product: July 14th, 2018
Gene Model: July 14th, 2018
7 months agonbcs22 nucleobase:cation symporter22:
 
GRMZM2G095611
Chai, WB et al. 2018. Frontiers Plant Sci 9:856     Reference: July 14th, 2018
Gene Product: July 14th, 2018
Gene Model: July 14th, 2018
7 months agonbcs23 nucleobase:cation symporter23:
 
GRMZM2G437859
Chai, WB et al. 2018. Frontiers Plant Sci 9:856     Reference: July 14th, 2018
Gene Product: July 14th, 2018
Gene Model: July 14th, 2018
7 months agonbcs24 nucleobase:cation symporter24:
 
GRMZM2G363292
Chai, WB et al. 2018. Frontiers Plant Sci 9:856     Reference: July 14th, 2018
Gene Product: July 14th, 2018
Gene Model: July 14th, 2018
7 months agonbcs16 nucleobase:cation symporter16:
5.06
GRMZM5G812555
Chai, WB et al. 2018. Frontiers Plant Sci 9:856     Reference: July 14th, 2018
Gene Product: July 14th, 2018
Gene Model: July 14th, 2018
7 months agobnlg1118  :
5.07
GRMZM2G152703
    Variation: September 1st, 2003
Gene Model: July 13th, 2018
7 months agogbptf17 GeBP-transcription factor 17: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
5.07
GRMZM2G083886
Yilmaz, A et al. 2009. Plant Physiol 149:171-180     Reference: May 12th, 2011
Variation: September 1st, 2003
Gene Model: July 13th, 2018
7 months agoAY110369  :
5.07
GRMZM2G046407
    Variation: July 29th, 2004
Gene Model: July 13th, 2018
7 months agobnlg609  :
5.06
GRMZM2G076313
    Variation: September 1st, 2003
Gene Model: July 12th, 2018
7 months agoumc1524  :
5.06
AC185464.3_FG003
    Variation: September 1st, 2003
Gene Model: July 12th, 2018
7 months agoumc1680  :
5.06
GRMZM2G057958
    Variation: September 1st, 2003
Gene Model: July 12th, 2018
7 months agoglpdh2 glycerol-3-phosphate dehydrogenase2: Likely encodes glycerol-3-phosphate dehydrogenase per Alexandrov et al.NAD+-dependent type A
8.08
GRMZM2G090747
Zhao, Y et al. 2018. PLoS One 13:e0200357     Reference: July 11th, 2018
Gene Product: July 12th, 2018
Variation: May 17th, 2016
Gene Model: May 17th, 2016
7 months agogss1 starch synthase homolog1: endosperm cDNA 5C04B10 (uaz218), similar to pea starch synthase isoform II
5.06
GRMZM2G105791
Helentjaris, T. 1994. Nucleotide sequence submission to dbEST/GenBank     Reference: September 1st, 2003
Gene Product: September 1st, 2003
Variation: October 7th, 2010
Gene Model: July 12th, 2018
7 months agoglpdh3 glycerol-3-phosphate dehydrogenase3: NAD+-dependent type A
 
GRMZM2G173195
Zhao, Y et al. 2018. PLoS One 13:e0200357     Reference: July 11th, 2018
Gene Product: July 12th, 2018
Gene Model: July 11th, 2018
7 months agoglpdh4 glycerol-3-phosphate dehydrogenase4: NAD+-dependent type A
 
   Zhao, Y et al. 2018. PLoS One 13:e0200357     Reference: July 11th, 2018
Gene Product: July 12th, 2018
7 months agoglpdh5 glycerol-3-phosphate dehydrogenase5: NAD+-dependent type A
 
GRMZM2G063258
Zhao, Y et al. 2018. PLoS One 13:e0200357     Reference: July 11th, 2018
Gene Product: July 12th, 2018
Gene Model: July 11th, 2018
7 months agoglpdh6 glycerol-3-phosphate dehydrogenase6: FAD-dependent type B
 
GRMZM2G446108
Zhao, Y et al. 2018. PLoS One 13:e0200357     Reference: July 11th, 2018
Gene Product: July 12th, 2018
Gene Model: July 11th, 2018
7 months agosbp9 SBP-transcription factor 9: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
8.01
   Wei, HB et al. 2018. J Exp Bot pp.doi: 10.1093/jxb/ery258     Reference: July 11th, 2018
Gene Product: December 18th, 2014
7 months agosbp28 SBP-transcription factor 28: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
10.07
GRMZM2G058588
Wei, HB et al. 2018. J Exp Bot pp.doi: 10.1093/jxb/ery258     Reference: July 11th, 2018
Gene Product: December 18th, 2014
Variation: September 1st, 2003
Gene Model: January 16th, 2018
7 months agosbp6 SBP-transcription factor 6: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
5.00
GRMZM2G138421
Wei, HB et al. 2018. J Exp Bot pp.doi: 10.1093/jxb/ery258     Reference: July 11th, 2018
Gene Product: December 18th, 2014
Variation: September 1st, 2003
Gene Model: June 14th, 2018
7 months agoumc1155  : similar to Arabidopsis phototropic-responsive NPH3-like protein
5.05
GRMZM2G044359
    Variation: September 1st, 2003
Gene Model: July 11th, 2018
7 months agoumc1264  : similar to Arabidopsis Nucleotide-sugar transporter family protein
5.05
GRMZM2G025236
    Variation: September 1st, 2003
Gene Model: July 11th, 2018
7 months agosbp16 SBP-transcription factor16: NCBI: squamosa promoter-binding-like protein 15 Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
1.06
GRMZM2G169270
Wei, HB et al. 2018. J Exp Bot pp.doi: 10.1093/jxb/ery258     Reference: July 11th, 2018
Gene Product: December 18th, 2014
Variation: September 1st, 2003
Gene Model: October 29th, 2016
7 months agosbp2 SBP-domain protein2: cDNA sequence; SSR's umc1573, umc1574, umc1623
4.09
GRMZM2G168229
Wei, HB et al. 2018. J Exp Bot pp.doi: 10.1093/jxb/ery258     Reference: July 11th, 2018
Gene Product: December 18th, 2014
Variation: October 8th, 2011
Gene Model: December 18th, 2014
7 months agosbp3 SBP-domain protein3: cDNA sequence with SSR's umc1572, umc1595
6.02
GRMZM2G101499
Wei, HB et al. 2018. J Exp Bot pp.doi: 10.1093/jxb/ery258     Reference: July 11th, 2018
Gene Product: December 18th, 2014
Variation: September 1st, 2003
Gene Model: December 18th, 2014
7 months agosbp1 SBP-domain protein1: cDNA sequence, SSR's umc1575, umc1624
5.04
GRMZM2G111136
Wei, HB et al. 2018. J Exp Bot pp.doi: 10.1093/jxb/ery258     Reference: July 11th, 2018
Gene Product: December 18th, 2014
Variation: October 8th, 2011
Gene Model: December 18th, 2014
7 months agosbp11 SBP-transcription factor 11: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Wei, HB et al. 2018. J Exp Bot pp.doi: 10.1093/jxb/ery258     Reference: July 11th, 2018
Gene Product: December 18th, 2014
7 months agosbp13 SBP-transcription factor 13: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Wei, HB et al. 2018. J Exp Bot pp.doi: 10.1093/jxb/ery258     Reference: July 11th, 2018
Gene Product: December 18th, 2014
7 months agosbp17 SBP-transcription factor 17: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Wei, HB et al. 2018. J Exp Bot pp.doi: 10.1093/jxb/ery258     Reference: July 11th, 2018
Gene Product: December 18th, 2014
7 months agosbp18 SBP-transcription factor 18: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Wei, HB et al. 2018. J Exp Bot pp.doi: 10.1093/jxb/ery258     Reference: July 11th, 2018
Gene Product: December 18th, 2014
7 months agosbp20 SBP-transcription factor 20: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Wei, HB et al. 2018. J Exp Bot pp.doi: 10.1093/jxb/ery258     Reference: July 11th, 2018
Gene Product: December 18th, 2014
Variation: February 22nd, 2018
7 months agosbp21 SBP-transcription factor 21: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Wei, HB et al. 2018. J Exp Bot pp.doi: 10.1093/jxb/ery258   AT1G27370 (TAIR) Reference: July 11th, 2018
Gene Product: December 18th, 2014
7 months agosbp22 SBP-transcription factor 22: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Wei, HB et al. 2018. J Exp Bot pp.doi: 10.1093/jxb/ery258     Reference: July 11th, 2018
Gene Product: December 18th, 2014
7 months agosbp24 SBP-transcription factor 24: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Wei, HB et al. 2018. J Exp Bot pp.doi: 10.1093/jxb/ery258     Reference: July 11th, 2018
Gene Product: December 18th, 2014
7 months agosbp25 SBP-transcription factor 25: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Wei, HB et al. 2018. J Exp Bot pp.doi: 10.1093/jxb/ery258     Reference: July 11th, 2018
Gene Product: December 18th, 2014
7 months agosbp27 SBP-transcription factor 27: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Wei, HB et al. 2018. J Exp Bot pp.doi: 10.1093/jxb/ery258     Reference: July 11th, 2018
Gene Product: December 18th, 2014
7 months agosbp31 SBP-transcription factor 31: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Wei, HB et al. 2018. J Exp Bot pp.doi: 10.1093/jxb/ery258     Reference: July 11th, 2018
Gene Product: December 18th, 2014
7 months agosbp5 SBP-transcription factor 5: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Wei, HB et al. 2018. J Exp Bot pp.doi: 10.1093/jxb/ery258     Reference: July 11th, 2018
Gene Product: December 18th, 2014
7 months agosbp7 SBP-transcription factor 7: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Wei, HB et al. 2018. J Exp Bot pp.doi: 10.1093/jxb/ery258     Reference: July 11th, 2018
Gene Product: December 18th, 2014
7 months agoumc1752  :
5.06
GRMZM2G481755
    Variation: September 1st, 2003
Gene Model: July 11th, 2018
7 months agosbp3 (GRASSIUS) SBP-transcription factor 3: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
4.03
GRMZM2G106798
Wei, HB et al. 2018. J Exp Bot pp.doi: 10.1093/jxb/ery258     Reference: July 11th, 2018
Gene Product: December 18th, 2014
Gene Model: June 11th, 2018
7 months agosbp12 SBP-transcription factor 12: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
5.04
GRMZM2G126827
Wei, HB et al. 2018. J Exp Bot pp.doi: 10.1093/jxb/ery258     Reference: July 11th, 2018
Gene Product: December 18th, 2014
Gene Model: June 27th, 2018
7 months agoAY109938  :
5.06
GRMZM2G031952
    Variation: July 29th, 2004
Gene Model: July 11th, 2018
7 months agopac1 pale aleurone color1: recessive, non-lethal, regulates reduced pigment in kernels
5.06
GRMZM2G058432
Stroud, LK; McGinnis, K. 2017. Plant Direct. DOI: 10.1002/pld3.19     Reference: October 21st, 2017
Variation: February 23rd, 2013
Gene Model: July 11th, 2018
7 months agosbp19 SBP-transcription factor 19: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
4.09
GRMZM2G163813
Wei, HB et al. 2018. J Exp Bot pp.doi: 10.1093/jxb/ery258     Reference: July 11th, 2018
Gene Product: December 18th, 2014
Gene Model: July 11th, 2018
7 months agommc0081  :
5.05
GRMZM2G114241
    Variation: September 1st, 2003
Gene Model: July 10th, 2018
7 months agoinvan2 invertase alkaline neutral2:
5.05
GRMZM2G118737
Juarez-Colunga, S et al. 2018. Plant Mol Biol pp.doi: 10.1007/s11103-018-0746-5     Reference: June 12th, 2018
Gene Product: June 12th, 2018
Variation: September 1st, 2003
Gene Model: July 10th, 2018
7 months agoarodh3 arogenate dehydrogenase3: mutants have retarded vegetative growth and opaque endosperm
6.01
   Holding, DR et al. 2010. J Exp Bot 61:3663-3673     Reference: July 7th, 2018
Gene Product: July 7th, 2018
Variation: July 7th, 2018
7 months agofl2 floury2: endosperm opaque, soft; dosage effect; encodes an abnormal 24kDa alpha-zein, blocked in removal of its signal peptide, preventing transfer to lumen of the endoplasmic reticulummRNA for 22kD zein; in z1c(zp22) cluster
4.03
GRMZM2G397687
Zhang, SS et al. 2018. Plant Reproduction pp.doi: 10.1007/s00497-018-0344-3     Reference: July 7th, 2018
Gene Product: September 1st, 2003
Variation: October 17th, 2014
Gene Model: December 19th, 2011
7 months agoo1 opaque endosperm1: endosperm starch soft, opaque
4.08 - 4.08
GRMZM2G449909
Zhang, SS et al. 2018. Plant Reproduction pp.doi: 10.1007/s00497-018-0344-3     Reference: July 7th, 2018
Gene Product: September 1st, 2003
Variation: October 9th, 2017
Gene Model: August 28th, 2012
7 months agoo11 opaque endosperm11: thin, opaque, somewhat shrunken kernels with greyish cast
 
GRMZM2G147685
Zhang, SS et al. 2018. Plant Reproduction pp.doi: 10.1007/s00497-018-0344-3   AT1G49770 (TAIR) Reference: July 7th, 2018
Gene Product: September 14th, 2016
Variation: February 8th, 2018
Gene Model: February 8th, 2018
7 months agoo5 opaque endosperm5: like o1; virescent to yellow or white seedlings
7.02
GRMZM2G142873
Zhang, SS et al. 2018. Plant Reproduction pp.doi: 10.1007/s00497-018-0344-3     Reference: July 7th, 2018
Gene Product: June 17th, 2011
Variation: August 29th, 2011
Gene Model: September 19th, 2011
7 months agode30 defective endosperm B30: dominant De*-B30 has opaque, high lysine endosperm
7.01 - 7.02
AF546188.1_FG007
Zhang, SS et al. 2018. Plant Reproduction pp.doi: 10.1007/s00497-018-0344-3     Reference: July 7th, 2018
Gene Product: September 1st, 2003
Variation: September 15th, 2014
Gene Model: September 14th, 2014
7 months agofl4 floury4: semi-dominant opaque mutant that produces small, misshapen, and aggregated protein bodies; encodes member of 19kD α-zein z1A-1 subfamily
 
GRMZM2G353097
Zhang, SS et al. 2018. Plant Reproduction pp.doi: 10.1007/s00497-018-0344-3     Reference: July 7th, 2018
Gene Product: April 9th, 2014
Variation: April 8th, 2014
Gene Model: April 8th, 2014
7 months agoarodh1 arogenate dehydrogenase1: mutants have retarded vegetative growth and opaque endosperm
 
GRMZM2G084942
Holding, DR et al. 2010. J Exp Bot 61:3663-3673     Reference: July 7th, 2018
Gene Product: July 7th, 2018
Variation: July 7th, 2018
Gene Model: October 4th, 2017
7 months agoarodh2 arogenate dehydrogenase2:
 
GRMZM2G085117
Holding, DR et al. 2010. J Exp Bot 61:3663-3673     Reference: July 7th, 2018
Gene Product: July 7th, 2018
Gene Model: July 7th, 2018
7 months agoarodh4 arogenate dehydrogenase4:
 
GRMZM2G324297
Holding, DR et al. 2010. J Exp Bot 61:3663-3673     Reference: July 7th, 2018
Gene Product: July 7th, 2018
Gene Model: July 7th, 2018
7 months agoufgt2 UDP-flavonol-glycosyltransferase2: mutants are sensitive to salt and drought stresses
 
GRMZM2G117878
Li, Y-J et al. 2018. Ann Bot pp.doi: 10.1093/aob/mcy123     Reference: July 4th, 2018
Gene Product: July 4th, 2018
Variation: July 4th, 2018
Gene Model: July 4th, 2018
7 months agochb101a chromatin remodeling complex subunit B (Swi3):
5.01
GRMZM5G878347
Yu, XM et al. 2018. Plant Mol Biol pp.doi: 10.1007/s11103-018-0751-8     Reference: June 30th, 2018
Variation: September 1st, 2003
Gene Model: June 30th, 2018
7 months agochb101b chromatin remodeling complex subunit B (Swi3): mybr53 locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
1.10
GRMZM2G047038
Nelissen, H et al. 2015. Plant Cell pp.doi: 10.1105/tpc.15.00269     Reference: July 2nd, 2015
Variation: September 1st, 2003
Gene Model: June 30th, 2018
7 months agobnlg2323  :
5.04
GRMZM2G121366
    Variation: September 1st, 2003
Gene Model: June 29th, 2018
7 months agoumc1349  :
5.04
GRMZM2G170742
    Variation: September 1st, 2003
Gene Model: June 29th, 2018
7 months agoumc1966  :
5.04 - 5.05
GRMZM2G074017
    Variation: September 1st, 2003
Gene Model: June 29th, 2018
7 months agorht* reducing-height*: dominant short plant mutant
 
   Chen, Q et al. 2018. Genes Genom doi: 10.1007/s13258-018-0716-y     Reference: June 29th, 2018
Variation: June 29th, 2018
7 months agoereb144 AP2-EREBP-transcription factor 144: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
5.04
GRMZM2G005301
Yilmaz, A et al. 2009. Plant Physiol 149:171-180     Reference: May 12th, 2011
Variation: September 1st, 2003
Gene Model: June 28th, 2018
7 months agoumc1591  : similar to Arabidopsis protein WAX2
5.04
GRMZM2G083526
    Variation: September 1st, 2003
Gene Model: June 28th, 2018
7 months agobzip89 bZIP-transcription factor 89: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
5.04
GRMZM2G158313
Yilmaz, A et al. 2009. Plant Physiol 149:171-180     Reference: May 12th, 2011
Variation: September 1st, 2003
Gene Model: June 28th, 2018
7 months agoumc1990  :
5.04
GRMZM2G120408
    Variation: September 1st, 2003
Gene Model: June 28th, 2018
7 months agocbp4 calmodulin binding protein4: single copy; has no significant sequence homology with cbp2, another maize gene that encodes a calmodulin binding protein;
5.04
GRMZM2G312827
Safadi, F et al. 2000. J Biol Chem 275:35457-35470     Reference: September 1st, 2003
Gene Product: September 1st, 2003
Variation: September 1st, 2003
Gene Model: June 28th, 2018
7 months agocdc202 cell division cycle202:
5.04
GRMZM2G130425
Zheng, HY et al. 2016. Plant Cell Physiol pp.doi: 10.1093/pcp/pcw195     Reference: November 18th, 2016
Variation: June 28th, 2018
Gene Model: June 28th, 2018
7 months agocle18 clavata3/esr-related18: candidate for clavata3 (CLV3) ortholog
5.03
AC233959.1_FG003
Je, BI et al. 2016. Nature Genetics 48:785-791     Reference: September 17th, 2016
Variation: September 1st, 2003
Gene Model: June 27th, 2018
7 months agobnl4.36  :
5.04
GRMZM2G482256
    Variation: September 1st, 2003
Gene Model: June 27th, 2018
7 months agouaz275  : endosperm cDNA 5C02B05 (uaz275) single copy
5.04 - 5.04
GRMZM2G096972
Helentjaris, T et al. 1994. MNL 68:101-104     Reference: September 1st, 2003
Variation: September 1st, 2003
Gene Model: June 27th, 2018
7 months agomthr1 methionine synthase homolog1: leaf cDNA csu194 similar to E. coli metE
5.02
GRMZM2G112149
Benner, M; Galioto, A; Johnson, J. 1996. Maize Genetics Conference Abstracts 38     Reference: September 1st, 2003
Gene Product: September 1st, 2003
Variation: September 1st, 2003
Gene Model: June 27th, 2018
7 months agoAY104079  :
5.03
GRMZM2G044348
    Variation: March 7th, 2007
Gene Model: June 27th, 2018
7 months agomch4 maize CRY1 homolog4: Homolog to yeast 40S ribosomal protein S14 gene family
 
GRMZM5G882378
    Variation: October 14th, 2010
Gene Model: June 27th, 2018
7 months agoumc1429  :
5.03
       Variation: June 26th, 2018
7 months agomlo6 barley mlo defense gene homolog6: one of 9 seven-transmembrane homologues to barley powdery mildew defense response gene
5.03
GRMZM2G325653
Devoto, A et al. 2003. J Mol Evol 56: 77-88     Reference: March 16th, 2006
Variation: June 26th, 2018
Gene Model: June 26th, 2018
8 months agoumc1355  :
5.03
GRMZM5G823135
    Variation: September 1st, 2003
Gene Model: June 23rd, 2018
8 months agoumc1447  :
5.03
GRMZM2G137694
    Variation: September 1st, 2003
Gene Model: June 23rd, 2018
8 months agoumc1557a  :
5.03
GRMZM2G133895
    Variation: September 1st, 2003
Gene Model: June 23rd, 2018
8 months agoumc1609  :
5.03
GRMZM2G098793
    Variation: September 1st, 2003
Gene Model: June 23rd, 2018
8 months agoumc2297  :
5.03
GRMZM2G047175
    Variation: September 25th, 2007
Gene Model: June 23rd, 2018
8 months agoAY109995  : similar to Arabidopsis vacuolar-sorting receptor 3
5.03
GRMZM2G303631
    Variation: July 29th, 2004
Gene Model: June 23rd, 2018
8 months agopco105903  :
5.03
GRMZM2G083453
    Variation: September 25th, 2007
Gene Model: June 23rd, 2018
8 months agolox3 lipoxygenase3:
3.06
   Castano-Duque, L et al. 2018. J Chem Ecol pp.doi: 10.1007/s10886-018-0972-y     Reference: June 22nd, 2018
Gene Product: January 3rd, 2018
Variation: November 14th, 2014
8 months agocat3 catalase3: electrophoretic mobility, null allele is known; mitochondrial; tetrameric, intralocus hybrid bands occur; SSRs phi006, phi019, phi076, umc1197
4.11
   Castano-Duque, L et al. 2018. J Chem Ecol pp.doi: 10.1007/s10886-018-0972-y     Reference: June 22nd, 2018
Gene Product: September 1st, 2003
Variation: March 2nd, 2007
8 months agolox6 lipoxygenase6:
2.02
GRMZM2G040095
Castano-Duque, L et al. 2018. J Chem Ecol pp.doi: 10.1007/s10886-018-0972-y     Reference: June 22nd, 2018
Gene Product: January 3rd, 2018
Variation: June 11th, 2014
Gene Model: June 10th, 2014
8 months agogst19 glutathione transferase19:
6.04
GRMZM2G335618
Castano-Duque, L et al. 2018. J Chem Ecol pp.doi: 10.1007/s10886-018-0972-y     Reference: June 22nd, 2018
Gene Product: September 1st, 2003
Variation: August 18th, 2010
Gene Model: July 27th, 2016
8 months agolox1 lipoxygenase1: Full length cDNA is expressed in E. coli (Kim et al. 2003)
3.06
   Castano-Duque, L et al. 2018. J Chem Ecol pp.doi: 10.1007/s10886-018-0972-y     Reference: June 22nd, 2018
Gene Product: November 13th, 2014
Variation: July 24th, 2008
8 months agolox5 lipoxygenase5:
5.02
GRMZM2G102760
Castano-Duque, L et al. 2018. J Chem Ecol pp.doi: 10.1007/s10886-018-0972-y     Reference: June 22nd, 2018
Gene Product: January 3rd, 2018
Variation: April 20th, 2018
Gene Model: June 10th, 2014
8 months agobx13 benzoxazinone synthesis13: encodes a 2-oxoglutarate-dependent dioxygenase that catalyzes the conversion of DIMBOA-Glc into a new benzoxazinoid intermediate (TRIMBOA-Glc) by an uncommon reaction involving a hydroxylation and a likely ortho-rearrangement of a methoxy group.
 
AC148152.3_FG005
Castano-Duque, L et al. 2018. J Chem Ecol pp.doi: 10.1007/s10886-018-0972-y     Reference: June 22nd, 2018
Gene Product: June 20th, 2016
Variation: June 20th, 2016
Gene Model: June 20th, 2016
8 months agoppo1 polyphenol oxidase1: vegetative meristem cDNA 7C02D02
10.03
GRMZM5G851266
Castano-Duque, L et al. 2018. J Chem Ecol pp.doi: 10.1007/s10886-018-0972-y     Reference: June 22nd, 2018
Gene Product: September 1st, 2003
Variation: January 21st, 2015
Gene Model: January 21st, 2015
8 months agopr1 red aleurone1: changes purple aleurone to red; encodes flavonoid 3'-hydroxylase
5.05
GRMZM2G025832
Tohge, T et al. 2017. J Exp Bot 68:4013-4028     Reference: September 20th, 2017
Gene Product: June 20th, 2018
Variation: June 10th, 2011