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CHECK HERE FOR DESCRIPTIONS OF NEWLY CHARACTERIZED MAIZE GENES!

With the overwhelming number of genes that are being discovered by phenotypic and sequence analyses, the MaizeGDB staff is missing some that should be included in MaizeGDB. We need your help! Please let us know about new genes that you're working on or have recently read about.

Below is a list of newly reported or newly characterized genes (new reference, new gene product, and/or new variation) with which you may not yet be familiar. The genes are sorted by the last time the gene has been updated. To suggest genes for inclusion in this list, email us and include the gene name, full name, chromosome or bin, and a recent reference.

If you cannot find the gene you would like to recommend in the database, send us an email so that we can add it to the database!

This page is based on our monthly release. The most recent updates can be found on our curation site or by clicking the Most Recent Data option in the menu below.


         Recommended Genes


Most recent data | Six months | One year | All time

New or updated genes since one year ago. The cutoff date is April 3rd, 2019

Last UpdateGeneFull Name : DescriptionChromosome
or Bin
Gene
Model
Recent ReferenceOrthologsUpdate information
yesterdaya2 anthocyaninless2: like a1, but red pericarp with P1-rr
5.03
   Zhou, P, et al. 2020. Plant Cell. 0:doi: 10.1105/tpc.20.00080     Reference: April 2nd, 2020
Gene Product: June 7th, 2012
Variation: September 1st, 2003
yesterdaybz1 bronze1: modifies purple aleurone and plant color to pale or reddish brown; anthers yellow-fluorescent; allele bz1-m4 = sh1-bz1-m4; SSR phi017NCBI: UDPG-flavonoid 3-oxy glucosyl transferase
9.02
   Zhou, P, et al. 2020. Plant Cell. 0:doi: 10.1105/tpc.20.00080     Reference: April 2nd, 2020
Gene Product: July 4th, 2018
Variation: November 20th, 2018
yesterdaybz2 bronze2: like bz1; anthers not fluorescent; an1-6923 mutation includes deletion for Bz2; encodes a glutathione S-transferase conjugating anthocyanins into the vacuole
1.08
   Zhou, P, et al. 2020. Plant Cell. 0:doi: 10.1105/tpc.20.00080     Reference: April 2nd, 2020
Gene Product: September 1st, 2003
Variation: March 31st, 2008
yesterdayd8 dwarf plant8: Dominant D8 plants resemble d1; extreme alleles not responsive to gibberellins.
1.09
GRMZM2G144744
Zhou, P, et al. 2020. Plant Cell. 0:doi: 10.1105/tpc.20.00080     Reference: April 2nd, 2020
Gene Product: February 12th, 2007
Variation: August 29th, 2007
Gene Model: May 11th, 2011
yesterdayg2 golden plant2: (aka g5, pg14, v19, pg-m, bsd1) golden pale-green, weak plants; sheaths whitish yellow-green; pg-m (now g2-pg14::I) of Peterson is a mutable allele that responds to En; small bundle sheath plastids; SSR umc2101, umc2102, umc2103, umc2104, umc2105, umc2106, umc2107, umc2108.pale green seedling lethal, reduced Rubisco and NADP-malic enzyme, small bundle sheath plastids
3.00 - 3.01
GRMZM2G087804
Zhou, P, et al. 2020. Plant Cell. 0:doi: 10.1105/tpc.20.00080     Reference: April 2nd, 2020
Gene Product: July 11th, 2019
Variation: October 24th, 2017
Gene Model: August 30th, 2013
yesterdayo2 opaque endosperm2: like o1; high lysine content; regulates b-32 protein (see rip1); reduced lysine degradation (lysine-ketoglutaric reductase); SSRs phi057, 112
7.01
   Zhou, P, et al. 2020. Plant Cell. 0:doi: 10.1105/tpc.20.00080     Reference: April 2nd, 2020
Gene Product: September 1st, 2003
Variation: June 6th, 2016
yesterdaypl1 purple plant1: Pl1 plant tissues have light-independent pigment, pl1 blue light-dependent; Pl1-Bh1, colored patches in c1 aleurone and in plant; transcriptional activator for flavonoid genes; SSR phi031, nc009, nc010. umc1014
6.04
   Zhou, P, et al. 2020. Plant Cell. 0:doi: 10.1105/tpc.20.00080     Reference: April 2nd, 2020
Gene Product: June 16th, 2015
Variation: March 28th, 2013
yesterdayr1 colored1: regulates anthocyanin pathway; dominant R1 (S element) confers function in aleurone; dominants represented by R1-r or r1-r (P element) confer function in anthers, leaf tip, brace roots, etc.
10.06
   Zhou, P, et al. 2020. Plant Cell. 0:doi: 10.1105/tpc.20.00080     Reference: April 2nd, 2020
Gene Product: October 13th, 2010
Variation: January 6th, 2018
yesterdayts1 tassel seed1: tassel pistillate and pendant; if removed, small ear with irregular kernel placement develops
2.04 - 2.05
   Zhou, P, et al. 2020. Plant Cell. 0:doi: 10.1105/tpc.20.00080     Reference: April 2nd, 2020
Gene Product: January 3rd, 2018
Variation: September 5th, 2019
yesterdayufo1 unstable factor for orange1: dominant Ufo1 plants have orange color in anthers, silks, and most other plant parts in presence of P1-wr or P1-rr; growth retarded
10.03
GRMZM2G053177
Zhou, P, et al. 2020. Plant Cell. 0:doi: 10.1105/tpc.20.00080     Reference: April 2nd, 2020
Variation: December 19th, 2018
Gene Model: December 19th, 2018
yesterdaylox10 lipoxygenase10: green leaf volatiles, circadian, herbivore defense; sequence predicts plastidic location; images show location in non-chlorophyll containing organelles
4.09
GRMZM2G015419
Zhou, P, et al. 2020. Plant Cell. 0:doi: 10.1105/tpc.20.00080     Reference: April 2nd, 2020
Gene Product: January 3rd, 2018
Variation: February 28th, 2020
Gene Model: October 29th, 2015
yesterdayfnr2 ferredoxin NADP reductase2:
7.01
GRMZM2G011858
Zhou, P, et al. 2020. Plant Cell. 0:doi: 10.1105/tpc.20.00080     Reference: April 2nd, 2020
Variation: October 9th, 2009
Gene Model: September 4th, 2018
yesterdaymads69 MADS-transcription factor 69: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.contributes to natural variation in flowering time in maize
 
   Liu, HJ, et al. 2020. Plant Cell. 0:doi: 10.1105/tpc.19.00934     Reference: April 2nd, 2020
Variation: October 5th, 2018
yesterdaysbp22 SBP-transcription factor 22: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Liu, HJ, et al. 2020. Plant Cell. 0:doi: 10.1105/tpc.19.00934     Reference: April 2nd, 2020
Gene Product: July 5th, 2019
yesterdaybzip22 bZIP-transcription factor 22: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Zhou, P, et al. 2020. Plant Cell. 0:doi: 10.1105/tpc.20.00080   AT1G43700 (TAIR) Reference: April 2nd, 2020
Gene Product: August 21st, 2018
Variation: September 24th, 2018
yesterdayfea4 fasciated ear4: Mutants are semidwarfed with fasciated ears and tassels as well as greatly enlarged vegetative and inflorescence meristems.
 
   Zhou, P, et al. 2020. Plant Cell. 0:doi: 10.1105/tpc.20.00080     Reference: April 2nd, 2020
Gene Product: August 21st, 2018
Variation: July 7th, 2017
yesterdayris2 iron-sulfur protein2: one of two very similar cDNAs recovered by antiserum screen from B73 seedling leaf RNA, both transcribed in leaf tissue (Barkan and Walker 1994)cDNA csu271, gene specific, one of two very similar cDNAs for chloroplastic iron-sulfur protein
4.09
GRMZM2G038365
Zhou, P, et al. 2020. Plant Cell. 0:doi: 10.1105/tpc.20.00080     Reference: April 2nd, 2020
Gene Product: November 5th, 2014
Variation: November 1st, 2014
Gene Model: October 31st, 2014
yesterdayris1 iron-sulfur protein1: one of two very similar cDNAs recovered by antiserum screen from B73 seedling leaf RNA, both transcribed in leaf tissue (Barkan and Walker 1994)
5.04
GRMZM2G162748
Zhou, P, et al. 2020. Plant Cell. 0:doi: 10.1105/tpc.20.00080     Reference: April 2nd, 2020
Gene Product: November 5th, 2014
Variation: October 31st, 2014
Gene Model: October 31st, 2014
yesterdaymyc7 myc transcription factor7: transcription factor induced by iron starvation; restores yeast fet3 fet4
1.05
GRMZM2G001930
Zhou, P, et al. 2020. Plant Cell. 0:doi: 10.1105/tpc.20.00080     Reference: April 2nd, 2020
Gene Product: September 14th, 2016
Variation: November 10th, 2005
Gene Model: July 28th, 2016
yesterdayMuk Mu killer: Mu killer methylates mutator TIRs and acts dominantly to silence active Mutator systems.
 
   Burgess, D et al. 2020. Genetics pp.doi: 10.1534/genetics.120.303033     Reference: April 2nd, 2020
Variation: November 12th, 2004
yesterdaycol11 C2C2-CO-like-transcription factor 11: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also
2.04
GRMZM2G095598
Zhou, P, et al. 2020. Plant Cell. 0:doi: 10.1105/tpc.20.00080     Reference: April 2nd, 2020
Gene Product: June 18th, 2018
Variation: October 9th, 2018
Gene Model: June 18th, 2018
yesterdayaos1 allene oxide synthase1: expression induction by herbivory and methyl jasmonate
9.06
GRMZM2G067225
Zhou, P, et al. 2020. Plant Cell. 0:doi: 10.1105/tpc.20.00080     Reference: April 2nd, 2020
Gene Product: September 1st, 2003
Variation: September 24th, 2010
Gene Model: October 29th, 2015
yesterdaylox7 lipoxygenase7:
10.04
GRMZM2G070092
Zhou, P, et al. 2020. Plant Cell. 0:doi: 10.1105/tpc.20.00080     Reference: April 2nd, 2020
Gene Product: January 3rd, 2018
Variation: April 23rd, 2009
Gene Model: June 10th, 2014
yesterdaylox9 lipoxygenase9:
1.02
GRMZM2G017616
Zhou, P, et al. 2020. Plant Cell. 0:doi: 10.1105/tpc.20.00080     Reference: April 2nd, 2020
Gene Product: January 3rd, 2018
Variation: June 12th, 2014
Gene Model: October 23rd, 2013
yesterdaylox11 lipoxygenase11:
5.04
GRMZM2G009479
Zhou, P, et al. 2020. Plant Cell. 0:doi: 10.1105/tpc.20.00080     Reference: April 2nd, 2020
Gene Product: January 3rd, 2018
Variation: June 10th, 2014
Gene Model: June 10th, 2014
yesterdaytrps1 trehalose-6-phosphate synthase1:
 
GRMZM2G068943
Liu, HJ, et al. 2020. Plant Cell. 0:doi: 10.1105/tpc.19.00934     Reference: April 2nd, 2020
Gene Product: September 15th, 2013
Gene Model: May 28th, 2012
yesterdayaos2 allene oxide synthesis2:
 
GRMZM2G072653
Zhou, P, et al. 2020. Plant Cell. 0:doi: 10.1105/tpc.20.00080     Reference: April 2nd, 2020
Gene Product: September 1st, 2003
Gene Model: October 29th, 2015
yesterdaynkd1 naked endosperm1: double mutants have multiple (2-5) layers of peripheral endosperm cells that lack starch granules or other features of starchy endosperm
 
GRMZM2G129261
Zhou, P, et al. 2020. Plant Cell. 0:doi: 10.1105/tpc.20.00080     Reference: April 2nd, 2020
Gene Product: January 3rd, 2015
Variation: January 3rd, 2015
Gene Model: January 2nd, 2015
yesterdayaos4 allene oxide synthesis4:
 
GRMZM2G072653
Zhou, P, et al. 2020. Plant Cell. 0:doi: 10.1105/tpc.20.00080     Reference: April 2nd, 2020
Gene Product: September 1st, 2003
Gene Model: October 29th, 2015
yesterdayaos3 allene oxide synthesis3:
 
GRMZM2G376661
Zhou, P, et al. 2020. Plant Cell. 0:doi: 10.1105/tpc.20.00080     Reference: April 2nd, 2020
Gene Product: September 1st, 2003
Gene Model: October 29th, 2015
yesterdaylox13 lipoxygenase13:
 
GRMZM5G822593
Zhou, P, et al. 2020. Plant Cell. 0:doi: 10.1105/tpc.20.00080     Reference: April 2nd, 2020
Gene Product: January 3rd, 2018
Gene Model: July 18th, 2017
yesterdayknr6 kernel number per row6: involved in determination of pistillate floret number and ear lengthKNR6 appears to phosphorylate an Arf GTPase-activating protein, a myelin basic protein, as well as itself. Jia et al, 2020qKNR6 was first identified as a QTL for "Kernel number per row".
 
GRMZM2G119714
Jia, HT, et al. 2020. Nature communications. 11:988     Reference: April 2nd, 2020
Gene Product: May 13th, 2014
Variation: February 20th, 2020
Gene Model: February 20th, 2020
yesterdayaos5 allene oxide synthesis5:
 
GRMZM2G033098
Zhou, P, et al. 2020. Plant Cell. 0:doi: 10.1105/tpc.20.00080     Reference: April 2nd, 2020
Gene Product: September 1st, 2003
Gene Model: March 19th, 2020
yesterdayhmt2 homocysteine S-methyltransferase 2:
 
GRMZM2G117240
Ranocha, P et al. 2001. Plant J 25:575-584     Reference: September 1st, 2003
Gene Product: July 19th, 2004
Gene Model: April 2nd, 2020
yesterdaydxs2 deoxy xylulose synthase 2: root specific; function inferred from sequence and expression pattern comparison with Medicago trunculata genes
9.03
GRMZM2G493395
Liu, HJ, et al. 2020. Plant Cell. 0:doi: 10.1105/tpc.19.00934     Reference: April 2nd, 2020
Gene Product: August 17th, 2004
Variation: September 17th, 2019
Gene Model: December 9th, 2011
yesterdayglk1 G2-like1: g2 golden2 paralog; specifically affects mesophyll chloroplast assembly, but not bundle sheath chloroplast assembly (Wang et al 2013)
9.00
GRMZM2G026833
Li, X et al. 2020. Communications Biology 3:151     Reference: April 2nd, 2020
Gene Product: July 11th, 2019
Variation: May 9th, 2009
Gene Model: September 27th, 2012
2 days agogex2 gamete expressed2: mutants have reduced transmission (<35% for two independent insertions), and also triggered seed defects when crossed as a male
 
GRMZM2G036832
Warman, C et al. 2020. PLoS Genetics pp.doi: 10.1371/journal.pgen.1008462   AT5G49150 (TAIR) Reference: April 1st, 2020
Gene Product: February 25th, 2020
Variation: February 25th, 2020
Gene Model: February 25th, 2020
3 days agopti1 pto-interacting1: specifically expressed in pollen and sequestered to the plasma membrane; co-localization callose was observed during stages of pollen mitosis I and pollen tube germination
3.04
GRMZM2G378547
Herrmann, MM et al. 2006. BMC Plant Biology 6:22     Reference: March 31st, 2020
Gene Product: May 13th, 2014
Gene Model: February 23rd, 2019
3 days agopti3 pto-interacting3:
 
GRMZM2G029530
Herrmann, MM et al. 2006. BMC Plant Biology 6:22     Reference: March 31st, 2020
Gene Product: May 13th, 2014
Gene Model: March 31st, 2020
3 days agopti4 pto-interacting4:
 
GRMZM2G001668
Herrmann, MM et al. 2006. BMC Plant Biology 6:22     Reference: March 31st, 2020
Gene Product: May 13th, 2014
Gene Model: March 31st, 2020
3 days agopti2 pto-interacting2:
10.03
GRMZM2G061447
Herrmann, MM et al. 2006. BMC Plant Biology 6:22     Reference: March 31st, 2020
Gene Product: May 13th, 2014
Gene Model: November 25th, 2019
4 days agozep1 zeaxanthin epoxidase1:
2.04
GRMZM2G127139
Schneider, HM et al. 2020. Plant Genome pp.doi: 10.1002/tpg2.20003     Reference: March 30th, 2020
Gene Product: December 10th, 2011
Variation: August 29th, 2011
Gene Model: April 8th, 2013
4 days agoarftf25 ARF-transcription factor 25: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
8.06
GRMZM2G116557
Schneider, HM et al. 2020. Plant Genome pp.doi: 10.1002/tpg2.20003     Reference: March 30th, 2020
Variation: August 22nd, 2017
Gene Model: August 22nd, 2017
4 days agoumc1347  :
3.04
GRMZM2G096548
    Variation: September 1st, 2003
Gene Model: March 30th, 2020
4 days agoumc1350  :
6.07
GRMZM2G038284
Zhuang, YL et al. 2008. Biol Plant 52:754-758     Reference: March 30th, 2020
Variation: September 1st, 2003
Gene Model: August 29th, 2018
4 days agotcptf26 TCP-transcription factor 26: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Schneider, HM et al. 2020. Plant Genome pp.doi: 10.1002/tpg2.20003     Reference: March 30th, 2020
Gene Product: September 27th, 2019
4 days agosus1 sucrose synthase1: (was sus2, css1) sucrose synthase-1 (SUS1) of embryo and other tissues, compare sh1; SSRs phi016, 032, 042
9.04
GRMZM2G152908
Schneider, HM et al. 2020. Plant Genome pp.doi: 10.1002/tpg2.20003     Reference: March 30th, 2020
Gene Product: October 25th, 2006
Variation: February 1st, 2020
Gene Model: August 12th, 2014
4 days agocl14964_1  :
3.04
GRMZM2G151653
    Variation: September 25th, 2007
Gene Model: March 30th, 2020
4 days agotrps11 trehalose-6-phosphate synthase11:
 
GRMZM2G122231
Schneider, HM et al. 2020. Plant Genome pp.doi: 10.1002/tpg2.20003     Reference: March 30th, 2020
Gene Product: September 15th, 2013
Gene Model: September 15th, 2013
5 days agoIDP876  :
3.04
GRMZM2G067223
    Variation: March 31st, 2005
Gene Model: March 29th, 2020
5 days agopco137802  :
3.04
GRMZM2G022088
    Variation: September 25th, 2007
Gene Model: March 29th, 2020
7 days agowx1 waxy1: amylopectin (stained red by iodine) replaces amylose (blue staining) in endosperm and pollen; extensive allelic series; application: highly branched starch has gelling properties, used for food gels, adhesives, and other industrial purposes; SSRs phi022, 027, 061NCBI: granule-bound starch synthase 1, chloroplastic/amyloplastic
9.03
   Qi, XT et al. 2020. The Crop Journal 10.1016/j.cj.2020.01.006     Reference: March 27th, 2020
Gene Product: June 4th, 2008
Variation: March 11th, 2020
8 days agoxer1 xerico1: encodes a RING finger domain type E3 ubiquitin ligaseOver-expression improves water use efficiency and drought tolerance in transgenic maize plants through reduction in ABA8OX proteins stability and ABA degradation.
2.07
GRMZM2G018070
Brugiere, N et al. 2017. Plant Physiol pp.doi: 10.1104/pp.17.01072     Reference: September 14th, 2017
Gene Product: March 26th, 2020
Gene Model: September 14th, 2017
8 days agoxer3 xerico3: encodes a RING finger domain type E3 ubiquitin ligase
 
GRMZM2G005840
Shi, QB et al. 2019. Biochem Biophys Res Commun pp.doi: 10.1016/j.bbrc.2019.05.142     Reference: June 17th, 2019
Gene Product: March 26th, 2020
Variation: September 14th, 2017
Gene Model: September 14th, 2017
8 days agoxer2 xerico2: encodes a RING finger domain type E3 ubiquitin ligase
 
GRMZM2G393349
Brugiere, N et al. 2017. Plant Physiol pp.doi: 10.1104/pp.17.01072     Reference: September 14th, 2017
Gene Product: March 26th, 2020
Gene Model: September 14th, 2017
8 days agoxer4 xerico4: encodes a RING finger domain type E3 ubiquitin ligase
 
GRMZM2G029623
Brugiere, N et al. 2017. Plant Physiol pp.doi: 10.1104/pp.17.01072     Reference: September 14th, 2017
Gene Product: March 26th, 2020
Gene Model: September 14th, 2017
8 days agoupl13 ubiquitin-protein ligase13:
 
GRMZM2G104920
Huai, JL et al. 2020. Physiol Plant pp.doi: 10.1111/ppl.13099   AT2G32950 (TAIR) Reference: March 26th, 2020
Gene Product: March 26th, 2020
Gene Model: March 26th, 2020
8 days agoupl14 ubiquitin-protein ligase14:
 
GRMZM2G126795
Huai, JL et al. 2020. Physiol Plant pp.doi: 10.1111/ppl.13099   AT2G32950 (TAIR) Reference: March 26th, 2020
Gene Product: March 26th, 2020
Gene Model: March 26th, 2020
9 days agohsf1 hairy sheath frayed1: dominant Hsf1 plants have pubescent sheaths and leaf margins; liguled enations at leaf marginscytokinin receptor; cytokinin responsive histidine protein kinase
5.06 - 5.07
GRMZM2G151223
Muszynski, MG et al. 2020. Plant Cell pp.doi; 10.1105/tpc.19.00677     Reference: March 25th, 2020
Gene Product: May 20th, 2016
Variation: August 23rd, 2019
Gene Model: August 23rd, 2019
9 days agoodo1 alpha keto dehydrogenase candidate1: etiolated leaf cDNA 6C02A09 (uaz215) similar to microbial TCA cycle enzyme
10.04
   Eprinstev, AT et al. 2020. Russ J Plant Physiol 67:378-385     Reference: March 25th, 2020
Gene Product: September 1st, 2003
Variation: September 25th, 2007
9 days agokgdh1 alpha-ketoglutarate dehydrogenase:
 
GRMZM2G079538
Liu, YM et al. 2019. BMC Plant Biology 19:592     Reference: December 30th, 2019
Gene Product: March 25th, 2020
Gene Model: December 30th, 2019
9 days agoogdh1 2-oxoglutarate dehydrogenase1:
 
GRMZM2G142863
Eprinstev, AT et al. 2020. Russ J Plant Physiol 67:378-385     Reference: March 25th, 2020
Gene Product: March 25th, 2020
Gene Model: March 25th, 2020
9 days agoogdh2 2-oxoglutarate dehydrogenase2:
 
   Eprinstev, AT et al. 2020. Russ J Plant Physiol 67:378-385     Reference: March 25th, 2020
Gene Product: March 25th, 2020
9 days agosaur2 small auxin up RNA2:
 
GRMZM2G156470
Knauss, S et al. 2003. The auxin-induced maize gene ZmSAUR2 encodes a short-lived nuclear protein expressed in elongating tissues. J Biol Chem 278:23936-23943     Reference: September 1st, 2003
Gene Product: September 1st, 2003
Gene Model: March 25th, 2020
10 days agophi453121a  : similar to Arabidopsis E3 ubiquitin-protein ligase SINAT3
3.00
GRMZM2G309063
    Variation: March 28th, 2018
Gene Model: March 24th, 2020
11 days agocsu622  :
2.09
GRMZM2G001444
    Variation: September 1st, 2003
Gene Model: March 23rd, 2020
11 days agobetl1c basal endosperm transfer layer1c:
2.09
GRMZM2G082785
Hueros, C et al. 1999. Plant Physiol 121:1143-1152     Reference: September 1st, 2003
Gene Product: September 1st, 2003
Variation: September 17th, 2012
Gene Model: March 23rd, 2020
11 days agonhx7 Na+/H+ antiporter 7: silicon up-regulates expression
 
GRMZM2G098494
Luo, J et al. 2020. Biol Plant 64:200-210   AT1G14660 (TAIR) Reference: March 23rd, 2020
Gene Product: August 25th, 2018
Gene Model: August 20th, 2018
11 days agonhx9 Na+/H+ antiporter 9:
 
GRMZM2G171507
Luo, J et al. 2020. Biol Plant 64:200-210     Reference: March 23rd, 2020
Gene Product: August 25th, 2018
Gene Model: March 23rd, 2020
11 days agoIDP2586  :
2.05
GRMZM2G106604
    Variation: March 31st, 2005
Gene Model: March 23rd, 2020
12 days agoumc1126  :
2.08
GRMZM2G021610
    Variation: September 1st, 2003
Gene Model: March 22nd, 2020
13 days agoagpsl1 ADP glucose pyrophosphorylase small subunit leaf1: leaf-specific
1.07
GRMZM2G163437
Yan, H-B et al. 2009. Theor Appl Genet 119:815-825     Reference: March 21st, 2020
Gene Product: September 1st, 2003
Variation: April 3rd, 2011
Gene Model: June 15th, 2012
13 days agouaz265b(sbe)  :
 
GRMZM2G169073
Yan, H-B et al. 2009. Theor Appl Genet 119:815-825     Reference: March 21st, 2020
Gene Product: September 1st, 2003
Gene Model: February 7th, 2015
13 days agoss6 starch synthase6:
5.03
   Yan, H-B et al. 2009. Theor Appl Genet 119:815-825     Reference: March 21st, 2020
Gene Product: October 14th, 2016
13 days agoae1 amylose extender1: glassy, tarnished endosperm; high amylose content; application: highly linear starch is used for food films, fibers, and other industrial purposes
5.04
   Yan, H-B et al. 2009. Theor Appl Genet 119:815-825     Reference: March 21st, 2020
Gene Product: June 6th, 2011
Variation: March 20th, 2020
13 days agobt1 brittle endosperm1: mature kernel collapsed, angular, often translucent and brittle (alleles sh3, sh5)
5.04
   Yan, H-B et al. 2009. Theor Appl Genet 119:815-825     Reference: March 21st, 2020
Gene Product: February 24th, 2015
Variation: March 16th, 2018
13 days agobt2 brittle endosperm2: like bt1; endosperm ADPG pyrophosphorylase subunit; with sh2 complements E. coli glgC
4.05
   Yan, H-B et al. 2009. Theor Appl Genet 119:815-825     Reference: March 21st, 2020
Gene Product: November 4th, 2014
Variation: December 4th, 2018
13 days agodu1 dull endosperm1: glassy, tarnished endosperm; encodes a starch synthase III, that with an isoamylase-type debranching enzyme represses accumulation of phytoglycogen
10.03
GRMZM2G141399
Yan, H-B et al. 2009. Theor Appl Genet 119:815-825     Reference: March 21st, 2020
Gene Product: October 14th, 2016
Variation: June 29th, 2015
Gene Model: February 28th, 2012
13 days agosh2 shrunken2: inflated, transparent, sweet kernels collapse on drying, becoming angular and brittle; endosperm ADPG pyrophosphorylase subunit (compare bt2); application: "supersweet" sweet corn - kernels sugar-sweet for long period
3.09
   Yan, H-B et al. 2009. Theor Appl Genet 119:815-825     Reference: March 21st, 2020
Gene Product: November 4th, 2014
Variation: January 9th, 2019
13 days agosu1 sugary1: endosperm wrinkled and translucent when dry; starch debranching enzyme I absent in developing endosperm, phytoglycogen but no debranching enzyme in germinating seeds; su1-am sugary-amylaceous; su1-st recessive starchy; application: the "sweet corn" gene - recessive kernels are creamy-sweet at milk stage
4.05
   Yan, H-B et al. 2009. Theor Appl Genet 119:815-825     Reference: March 21st, 2020
Gene Product: April 21st, 2016
Variation: June 6th, 2016
13 days agosu2 sugary2: endosperm glassy, translucent, sometimes wrinkled
6.04 - 6.05
   Yan, H-B et al. 2009. Theor Appl Genet 119:815-825     Reference: March 21st, 2020
Gene Product: October 14th, 2016
Variation: October 7th, 2010
13 days agozpu1 pullulanase-type starch debranching enzyme1: single copy, cDNA clone similar to rice sequence; SSR umc1003The zpu1 gene encodes a pullulanase-type starch debranching enzyme. Analysis of plants homozygous for the zpu1-204 mutation reveal the genes role in starch catabolism. zpu1-204 endosperm accumulate maltooligosaccharides not found in wild type plants. zpu1-204 are also deficient for linear maltooligosaccharides.
2.05
GRMZM2G158043
Yan, H-B et al. 2009. Theor Appl Genet 119:815-825     Reference: March 21st, 2020
Gene Product: October 25th, 2011
Variation: June 29th, 2015
Gene Model: November 20th, 2014
13 days agoumc1554  :
2.07
GRMZM2G002879
    Variation: September 1st, 2003
Gene Model: March 21st, 2020
13 days agogbss1 granule-bound starch synthase1:
 
GRMZM2G008263
Yan, H-B et al. 2009. Theor Appl Genet 119:815-825     Reference: March 21st, 2020
Gene Product: June 4th, 2008
Variation: August 4th, 2011
Gene Model: November 20th, 2014
13 days agopho1 starch phosphorylase1: amyloplast starch phosphorylase
1.10
GRMZM2G074158
Yan, H-B et al. 2009. Theor Appl Genet 119:815-825     Reference: March 21st, 2020
Gene Product: March 26th, 2015
Gene Model: March 26th, 2015
13 days agosbe1 starch branching enzyme1: maize kernel cDNA sequence is similar to starch branching enzyme I of bacteria, encodes a putative 64-amino acid plastid transit peptide (aka sbe1)
5.03
   Yan, H-B et al. 2009. Theor Appl Genet 119:815-825     Reference: March 21st, 2020
Gene Product: September 1st, 2003
Variation: January 5th, 2018
13 days agosbe3 starch branching enzyme3:
8.06
GRMZM2G005298
Yan, H-B et al. 2009. Theor Appl Genet 119:815-825     Reference: March 21st, 2020
Gene Product: June 6th, 2011
Variation: June 1st, 2011
Gene Model: September 23rd, 2018
13 days agogss1 starch synthase homolog1: endosperm cDNA 5C04B10 (uaz218), similar to pea starch synthase isoform II
5.06
GRMZM2G105791
Yan, H-B et al. 2009. Theor Appl Genet 119:815-825     Reference: March 21st, 2020
Gene Product: September 1st, 2003
Variation: October 7th, 2010
Gene Model: July 12th, 2018
13 days agoagpll1 ADP glucose pyrophosphorylase large subunit leaf1AGPL4:
1.10
GRMZM2G391936
Yan, H-B et al. 2009. Theor Appl Genet 119:815-825     Reference: March 21st, 2020
Gene Product: January 3rd, 2014
Variation: September 22nd, 2017
Gene Model: September 22nd, 2017
13 days agoagp2 ADP glucose pyrophosphorylase2: embryo specific counterpart to sh2
6.07 - 6.08
GRMZM2G027955
Yan, H-B et al. 2009. Theor Appl Genet 119:815-825     Reference: March 21st, 2020
Gene Product: July 22nd, 2015
Variation: June 15th, 2012
Gene Model: June 15th, 2012
13 days agopco099353  :
2.08
GRMZM2G151826
    Variation: September 25th, 2007
Gene Model: March 21st, 2020
13 days agoiso3 isoamylase-type starch debranching enzyme3:
 
GRMZM2G150796
Yan, H-B et al. 2009. Theor Appl Genet 119:815-825     Reference: March 21st, 2020
Gene Product: October 25th, 2011
Variation: April 7th, 2011
Gene Model: July 28th, 2016
13 days agosu4 sugary4: duplicate factor: in combination with su3 gives sugary endosperm phenotype.
6.05
GRMZM2G090905
Yan, H-B et al. 2009. Theor Appl Genet 119:815-825     Reference: March 21st, 2020
Gene Product: October 25th, 2011
Variation: June 3rd, 2011
Gene Model: October 24th, 2011
13 days agoagpll2 ADP glucose pyrophosphorylase large subunit leaf2:
 
GRMZM2G144002
Yan, H-B et al. 2009. Theor Appl Genet 119:815-825     Reference: March 21st, 2020
Gene Product: January 3rd, 2014
Gene Model: January 7th, 2014
13 days agoss4 starch synthase4:
 
GRMZM2G044744
Yan, H-B et al. 2009. Theor Appl Genet 119:815-825     Reference: March 21st, 2020
Gene Product: October 14th, 2016
Gene Model: December 5th, 2015
13 days agoss7 starch synthase7:
 
   Yan, H-B et al. 2009. Theor Appl Genet 119:815-825     Reference: March 21st, 2020
Gene Product: October 14th, 2016
13 days agosbe4 starch branching enzyme4:
 
GRMZM2G073054
Yan, H-B et al. 2009. Theor Appl Genet 119:815-825     Reference: March 21st, 2020
Gene Product: June 6th, 2011
Gene Model: March 20th, 2020
13 days agoss3 starch synthase3:
 
GRMZM2G121612
Yan, H-B et al. 2009. Theor Appl Genet 119:815-825     Reference: March 21st, 2020
Gene Product: October 14th, 2016
Gene Model: March 20th, 2020
13 days agoss2 starch synthase3:
 
GRMZM5G897776
Yan, H-B et al. 2009. Theor Appl Genet 119:815-825     Reference: March 21st, 2020
Gene Product: October 14th, 2016
Gene Model: March 20th, 2020
13 days agogbss2 granule-bound starch synthase2:
 
   Yan, H-B et al. 2009. Theor Appl Genet 119:815-825     Reference: March 21st, 2020
Gene Product: June 4th, 2008
13 days agoisol1 isoamylase3-like1:
 
GRMZM2G385578
Yan, H-B et al. 2009. Theor Appl Genet 119:815-825     Reference: March 21st, 2020
Gene Product: October 25th, 2011
Gene Model: March 21st, 2020
13 days agoss1 starch synthase I: single copy endosperm specific cDNA; encoded-protein cross-reacts with antibody to granule associated starch synthase I
9.02
   Yan, H-B et al. 2009. Theor Appl Genet 119:815-825     Reference: March 21st, 2020
Gene Product: October 14th, 2016
Variation: October 7th, 2010
13 days agopho2 starch phoshorylase2: cytosolic starch phosphorylase inferred from data in Yu et al 2001 (MS 2015)
3.06
GRMZM2G085577
Yan, H-B et al. 2009. Theor Appl Genet 119:815-825     Reference: March 21st, 2020
Gene Product: March 26th, 2015
Gene Model: March 26th, 2015
13 days agoagp1 ADP glucose pyrophosphorylase small subunit embryo 1: embryo cDNA that hybridizes to endosperm transcripts, distinct from sh2 and bt2 but most similar to the bt2 gene product
2.06
GRMZM2G106213
Yan, H-B et al. 2009. Theor Appl Genet 119:815-825     Reference: March 21st, 2020
Gene Product: January 3rd, 2014
Variation: November 4th, 2014
Gene Model: November 4th, 2014
14 days agosh1 shrunken1: inflated endosperm collapses on drying, forming smoothly indented kernels; sucrose synthase-sh1 of endosperm (compare sus1 and sus2); homotetramer; SSRs phi028, 044, 033
9.01
   He, W et al. 2020. Plant Mol Biol doi: 10.1007/s11103-020-0     Reference: March 20th, 2020
Gene Product: October 25th, 2006
Variation: February 1st, 2020
14 days agoZm00001d033937  :
 
   He, W et al. 2020. Plant Mol Biol doi: 10.1007/s11103-020-0     Reference: March 20th, 2020
Gene Product: June 4th, 2008
14 days agosus2 sucrose synthase2: Encodes sucrose synthase-2 (SUS2), one of 3 loci defined for this function; compare sh1 and sus1.
1.04
GRMZM2G318780
He, W et al. 2020. Plant Mol Biol doi: 10.1007/s11103-020-0     Reference: March 20th, 2020
Gene Product: October 25th, 2006
Variation: February 1st, 2020
Gene Model: August 3rd, 2013
15 days agoIDP738  :
1.10
GRMZM2G443453
Lin, M et al. 2020. G3 pp.doi: 10.1534/g3.119.400884     Reference: March 19th, 2020
Variation: March 31st, 2005
Gene Model: February 16th, 2019
16 days agomop1 mediator of paramutation1: recessive changes B' phenotype to dark, similar to B1-I
2.04
GRMZM2G042443
Vendramin, S et al. 2020. G3 doi: 10.1534/g3.119.40099     Reference: March 18th, 2020
Gene Product: August 8th, 2006
Variation: August 8th, 2006
Gene Model: April 24th, 2013
Recommended by Ed Coe:
January 8th, 2008
16 days agobx4 benzoxazinone synthesis4: endoplasmic reticulum P450 monoxygenase; synthesis of cyclic hydroxamates/DIMBOA; insect resistance in young seedlings; NAM SNP PHM1184
4.01
GRMZM2G172491
Wang, Y-F et al. 2020. Genomics Proteomics Bioinformatics doi: 10.1016/j.gpb.2018.05.005     Reference: March 18th, 2020
Gene Product: October 24th, 2011
Variation: October 27th, 2011
Gene Model: October 24th, 2011
16 days agosweet1a sugars will eventually be exported transporter1a:
3.06
GRMZM2G039365
Wang, Y-F et al. 2020. Genomics Proteomics Bioinformatics doi: 10.1016/j.gpb.2018.05.005     Reference: March 18th, 2020
Gene Product: November 4th, 2015
Gene Model: November 3rd, 2015
16 days agobr2 brachytic2: like br1; mi1 is allelic and preceded (1935), but br2 name is retained due to long usagelike Arabidopsis ABC transporter B family member 1
1.06 - 1.07
GRMZM2G315375
Wang, Y-F et al. 2020. Genomics Proteomics Bioinformatics doi: 10.1016/j.gpb.2018.05.005     Reference: March 18th, 2020
Gene Product: May 1st, 2012
Variation: December 30th, 2019
Gene Model: April 28th, 2012
16 days agogpc1 glyceraldehyde-3-phosphate dehydrogenase1: cytosolic, C subunit, type 3 gene; coding region has sequence homology to gpc2, unique 3' untranslated region, constitutive expression; SSRs phi026, 079
4.05
   Wang, Y-F et al. 2020. Genomics Proteomics Bioinformatics doi: 10.1016/j.gpb.2018.05.005     Reference: March 18th, 2020
Gene Product: September 1st, 2003
Variation: September 1st, 2003
16 days agopep1 phosphoenolpyruvate carboxylase1: cytosolic C4 isozyme; single copy, similar to C3-PEPCase genes; cDNA complements E. coli mutant; genomic and partial amino acid sequences compare; SSR phi065
9.03
   Wang, Y-F et al. 2020. Genomics Proteomics Bioinformatics doi: 10.1016/j.gpb.2018.05.005     Reference: March 18th, 2020
Gene Product: September 1st, 2003
Variation: February 10th, 2020
16 days agocncr1 cinnamoyl CoA reductase1: Mutant results in plants with improved cell wall digestibility
1.07
GRMZM2G131205
Wang, Y-F et al. 2020. Genomics Proteomics Bioinformatics doi: 10.1016/j.gpb.2018.05.005     Reference: March 18th, 2020
Gene Product: September 1st, 2003
Variation: May 5th, 2017
Gene Model: June 23rd, 2016
16 days agoumc1135  :
3.07
GRMZM2G105863
Wang, Y-F et al. 2020. Genomics Proteomics Bioinformatics doi: 10.1016/j.gpb.2018.05.005     Reference: March 18th, 2020
Variation: September 1st, 2003
Gene Model: March 30th, 2018
16 days agofrk2 fructokinase2:
6.00
GRMZM2G051677
Wang, Y-F et al. 2020. Genomics Proteomics Bioinformatics doi: 10.1016/j.gpb.2018.05.005     Reference: March 18th, 2020
Variation: May 1st, 2010
Gene Model: July 29th, 2016
16 days agorps22a ribosomal protein S22 homolog:
9.06
GRMZM2G067303
Wang, Y-F et al. 2020. Genomics Proteomics Bioinformatics doi: 10.1016/j.gpb.2018.05.005     Reference: March 18th, 2020
Gene Product: September 1st, 2003
Variation: July 3rd, 2013
Gene Model: July 28th, 2016
16 days agogl13 glossy13: necrotic glossy leaf; plants that survive to maturity are sterile (both male and female) and smaller than nonmutant sibs.Ortholog of Poales ATP-binding cassette transporter, PDR-like subfamily G, domain 1
 
GRMZM2G118243
Wang, Y-F et al. 2020. Genomics Proteomics Bioinformatics doi: 10.1016/j.gpb.2018.05.005     Reference: March 18th, 2020
Gene Product: December 28th, 2015
Variation: December 19th, 2013
Gene Model: December 9th, 2013
16 days agoubf9 ubiquitin fusion protein9: genomic sequence, hybridizing mRNA expressed during cell division and/or cell growth; multiple copies in genome
 
GRMZM2G431821
Wang, Y-F et al. 2020. Genomics Proteomics Bioinformatics doi: 10.1016/j.gpb.2018.05.005     Reference: March 18th, 2020
Gene Product: September 1st, 2003
Variation: September 1st, 2003
Gene Model: September 24th, 2018
16 days agonactf25 NAC-transcription factor 25: Lines with a MITE insert in the promotor region are more sensitive to drought than those lacking this MITE insert.
 
   Vendramin, S et al. 2020. G3 doi: 10.1534/g3.119.40099   LOC_Os11g03300 (MSU/TIGR) Reference: March 18th, 2020
Gene Product: July 8th, 2019
Variation: September 22nd, 2015
16 days agonactf60 NAC-transcription factor 60: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Vendramin, S et al. 2020. G3 doi: 10.1534/g3.119.40099     Reference: March 18th, 2020
Gene Product: July 8th, 2019
16 days agosbp18 SBP-transcription factor 18: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Vendramin, S et al. 2020. G3 doi: 10.1534/g3.119.40099     Reference: March 18th, 2020
Gene Product: July 5th, 2019
16 days agosbp7 SBP-transcription factor 7: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Vendramin, S et al. 2020. G3 doi: 10.1534/g3.119.40099     Reference: March 18th, 2020
Gene Product: July 5th, 2019
16 days agopep4 phosphoenolpyruvate carboxylase4: cDNA for anaplerotic C3 isozyme; gene specific cDNA probe;
7.02
   Wang, Y-F et al. 2020. Genomics Proteomics Bioinformatics doi: 10.1016/j.gpb.2018.05.005     Reference: March 18th, 2020
Gene Product: September 1st, 2003
Variation: December 27th, 2010
16 days agoelfa3 elongation factor alpha3: shares high (89-99%) nucleotide sequence identity with genes elf1a to elf1g, with a 99% sequence identity with elf1a.
6.05
GRMZM2G154218
Wang, Y-F et al. 2020. Genomics Proteomics Bioinformatics doi: 10.1016/j.gpb.2018.05.005     Reference: March 18th, 2020
Gene Product: September 1st, 2003
Variation: April 7th, 2014
Gene Model: July 27th, 2016
16 days agopip2b plasma membrane intrinsic protein2:
2.06
   Wang, Y-F et al. 2020. Genomics Proteomics Bioinformatics doi: 10.1016/j.gpb.2018.05.005     Reference: March 18th, 2020
Gene Product: September 1st, 2003
Variation: March 19th, 2013
16 days agovpp8 vacuolar proton pump8: encodes a vacuolar H+-ATPase subunit
7.04
GRMZM2G019999
Wang, Y-F et al. 2020. Genomics Proteomics Bioinformatics doi: 10.1016/j.gpb.2018.05.005     Reference: March 18th, 2020
Gene Product: September 1st, 2003
Gene Model: August 25th, 2018
16 days agoppi1 peptidyl-prolyl isomerase1: cDNA homologous to tomato peptidyl-prolyl cis-trans isomerase
5.04
GRMZM2G326111
Wang, Y-F et al. 2020. Genomics Proteomics Bioinformatics doi: 10.1016/j.gpb.2018.05.005     Reference: March 18th, 2020
Gene Product: December 14th, 2014
Variation: December 18th, 2014
Gene Model: December 14th, 2014
16 days agoplt1 phospholipid transfer protein homolog1: amino acid sequence, deduced from coleoptile cDNA, homologous to phospholipid transfer proteins
3.06
GRMZM2G101958
Wang, Y-F et al. 2020. Genomics Proteomics Bioinformatics doi: 10.1016/j.gpb.2018.05.005     Reference: March 18th, 2020
Gene Product: September 1st, 2003
Variation: March 17th, 2015
Gene Model: March 12th, 2015
16 days agogrx1 glutaredoxin homolog1: leaf cDNA csu40, similar to E. coli glutaredoxin
2.04 - 2.04
GRMZM2G150295
Wang, Y-F et al. 2020. Genomics Proteomics Bioinformatics doi: 10.1016/j.gpb.2018.05.005     Reference: March 18th, 2020
Gene Product: August 12th, 2012
Variation: August 16th, 2012
Gene Model: August 16th, 2012
16 days agohis1a histone1a: cDNA sequences, SSR umc1577
7.01
GRMZM2G401308
Wang, Y-F et al. 2020. Genomics Proteomics Bioinformatics doi: 10.1016/j.gpb.2018.05.005     Reference: March 18th, 2020
Gene Product: October 24th, 2017
Variation: October 31st, 2017
Gene Model: July 24th, 2015
16 days agoahh1 adenosyl homocysteine hydrolase1: endosperm cDNA 5C01H11 (uaz145) similar to plant activated methyl cycle enzyme
4.03
   Wang, Y-F et al. 2020. Genomics Proteomics Bioinformatics doi: 10.1016/j.gpb.2018.05.005     Reference: March 18th, 2020
Gene Product: September 1st, 2003
Variation: March 29th, 2015
16 days agoeif2 elongation initiation factor2: etiolated leaf cDNA 6C02E11(uaz224) similar to eIF-2 gamma chain
7.04
GRMZM2G107654
Wang, Y-F et al. 2020. Genomics Proteomics Bioinformatics doi: 10.1016/j.gpb.2018.05.005     Reference: March 18th, 2020
Gene Product: September 1st, 2003
Variation: July 8th, 2017
Gene Model: January 13th, 2015
16 days agokcs13 3-ketoacyl-CoA synthase13:
1.02
GRMZM2G445602
Wang, Y-F et al. 2020. Genomics Proteomics Bioinformatics doi: 10.1016/j.gpb.2018.05.005     Reference: March 18th, 2020
Gene Product: November 1st, 2018
Gene Model: September 2nd, 2018
16 days agofdl1 fused leaves1: coleoptile-first or first-second leaves fused at epidermis, curly
7.04
GRMZM2G056407
Vendramin, S et al. 2020. G3 doi: 10.1534/g3.119.40099     Reference: March 18th, 2020
Gene Product: September 1st, 2003
Variation: February 13th, 2020
Gene Model: September 12th, 2018
16 days agoAY110562  :
4.06
   Wang, Y-F et al. 2020. Genomics Proteomics Bioinformatics doi: 10.1016/j.gpb.2018.05.005     Reference: March 18th, 2020
Variation: September 25th, 2007
16 days agobhlh132 bHLH-transcription factor 132: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
3.05
GRMZM2G114873
Vendramin, S et al. 2020. G3 doi: 10.1534/g3.119.40099     Reference: March 18th, 2020
Gene Product: September 14th, 2016
Gene Model: September 12th, 2016
16 days agohon110 histone one (H1): (was H1a); mapped by electrophoretic mobility polymorphism as alh1
1.11
GRMZM2G164020
Wang, Y-F et al. 2020. Genomics Proteomics Bioinformatics doi: 10.1016/j.gpb.2018.05.005     Reference: March 18th, 2020
Variation: June 25th, 2014
Gene Model: October 25th, 2013
16 days agouce7 ubiquitin conjugating enzyme7:
 
GRMZM2G053764
Wang, Y-F et al. 2020. Genomics Proteomics Bioinformatics doi: 10.1016/j.gpb.2018.05.005     Reference: March 18th, 2020
Gene Product: December 19th, 2019
Variation: August 23rd, 2017
Gene Model: August 23rd, 2017
16 days agogpat11 glycerol-3-phosphate acyltransferase11:
 
GRMZM2G059637
Wang, Y-F et al. 2020. Genomics Proteomics Bioinformatics doi: 10.1016/j.gpb.2018.05.005     Reference: March 18th, 2020
Gene Product: March 25th, 2019
Gene Model: March 25th, 2019
16 days agoaldh17 aldehyde dehydrogenase17:
5.05
GRMZM2G169458
Wang, Y-F et al. 2020. Genomics Proteomics Bioinformatics doi: 10.1016/j.gpb.2018.05.005     Reference: March 18th, 2020
Gene Product: September 1st, 2003
Gene Model: October 2nd, 2019
16 days agorps12a ribosomal proteinS12 (homolog):
6.07
GRMZM2G132929
Wang, Y-F et al. 2020. Genomics Proteomics Bioinformatics doi: 10.1016/j.gpb.2018.05.005     Reference: March 18th, 2020
Gene Product: September 1st, 2003
Gene Model: December 26th, 2019
16 days agobx6 benzoxazinone synthesis6: cytosolic 2-oxoglutarate-dependent dioxygenase; synthesis of cyclohydroxamates/DIMBOA; insect resistance in young seedlings; SSR umc1232
4.01
   Wang, Y-F et al. 2020. Genomics Proteomics Bioinformatics doi: 10.1016/j.gpb.2018.05.005     Reference: March 18th, 2020
Gene Product: June 20th, 2016
Variation: April 12th, 2019
16 days agodbf1 DRE-binding protein 1:
1.07
GRMZM2G061487
Vendramin, S et al. 2020. G3 doi: 10.1534/g3.119.40099     Reference: March 18th, 2020
Gene Product: April 10th, 2013
Variation: July 27th, 2005
Gene Model: July 27th, 2016
17 days agoan1 anther ear1: andromonoecious dwarf, intermediate stature; few tassel branches; responds to gibberellins; an1-6923 includes deletion of Bz2+
1.08
GRMZM2G081554
Liang, ZK et al. 2020. Molecular Plant pp.doi: 10.1016/j.molp.2020.03.003     Reference: March 17th, 2020
Gene Product: August 16th, 2012
Variation: June 8th, 2019
Gene Model: November 7th, 2011
17 days agolg2 liguleless2: like lg1, less extreme
3.06
   Liang, ZK et al. 2020. Molecular Plant pp.doi: 10.1016/j.molp.2020.03.003     Reference: March 17th, 2020
Gene Product: August 22nd, 2014
Variation: August 20th, 2014
18 days agohak14 potassium high-affinity transporter14:
7.03
GRMZM2G139931
Zhang, ZB et al. 2012. Mol Biol Rep 39:8465-8473     Reference: March 16th, 2020
Gene Product: March 12th, 2020
Variation: September 1st, 2003
Gene Model: September 10th, 2018
18 days agoumc1259  :
2.04
GRMZM2G021834
    Variation: September 1st, 2003
Gene Model: March 16th, 2020
18 days agohak1 potassium high-affinity transporter1:
2.04
GRMZM2G093826
Zhang, ZB et al. 2012. Mol Biol Rep 39:8465-8473     Reference: March 16th, 2020
Gene Product: March 12th, 2020
Gene Model: February 23rd, 2018
18 days agolac2 laccase2:
6.05
GRMZM2G146152
Liu, MY et al. 2020. J Genet 99:23     Reference: March 16th, 2020
Gene Product: March 31st, 2018
Gene Model: August 28th, 2018
18 days agohak8 potassium high-affinity transporter8:
1.04
GRMZM2G173387
Zhang, ZB et al. 2012. Mol Biol Rep 39:8465-8473     Reference: March 16th, 2020
Gene Product: March 12th, 2020
Gene Model: February 7th, 2020
18 days agoopr7 12-oxo-phytodienoic acid reductase7: peroxisomal; jasmonic acid synthesis; opr7 opr8 double mutants are feminized, and have increased susceptibiliy to insect and fungal pests
 
GRMZM2G148281
He, YM et al. 2020. Phytochemistry 174:112334     Reference: March 16th, 2020
Gene Product: September 3rd, 2010
Variation: December 16th, 2019
Gene Model: November 25th, 2013
18 days agoopr8 12-oxo-phytodienoic acid reductase8: peroxisomal; synthesis of jasmonic acid
4.05
GRMZM2G082087
He, YM et al. 2020. Phytochemistry 174:112334     Reference: March 16th, 2020
Gene Product: September 3rd, 2010
Variation: December 16th, 2019
Gene Model: November 25th, 2013
18 days agolac10 laccase10:
 
GRMZM2G140527
Liu, MY et al. 2020. J Genet 99:23     Reference: March 16th, 2020
Gene Product: March 31st, 2018
Gene Model: May 6th, 2016
18 days agolac9 laccase9:
 
GRMZM2G132169
Liu, MY et al. 2020. J Genet 99:23     Reference: March 16th, 2020
Gene Product: March 31st, 2018
Gene Model: September 28th, 2016
18 days agolac3 laccase3:
 
GRMZM2G169033
Liu, MY et al. 2020. J Genet 99:23     Reference: March 16th, 2020
Gene Product: March 31st, 2018
Gene Model: March 31st, 2018
18 days agolac5 laccase5:
 
GRMZM2G367668
Liu, MY et al. 2020. J Genet 99:23     Reference: March 16th, 2020
Gene Product: March 31st, 2018
Gene Model: March 31st, 2018
18 days agolac4 laccase4:
 
GRMZM2G072780
Liu, MY et al. 2020. J Genet 99:23     Reference: March 16th, 2020
Gene Product: March 31st, 2018
Gene Model: March 31st, 2018
18 days agolac6 laccase6:
 
GRMZM2G164467
Liu, MY et al. 2020. J Genet 99:23     Reference: March 16th, 2020
Gene Product: March 31st, 2018
Gene Model: March 31st, 2018
18 days agolac1 laccase1:
 
GRMZM2G400390
Liu, MY et al. 2020. J Genet 99:23     Reference: March 16th, 2020
Gene Product: March 31st, 2018
Gene Model: March 31st, 2018
18 days agohak5 potassium high-affinity transporter5: mutants exhibit reduced K uptake and inhibited seedling growth
 
GRMZM2G084779
Zhang, ZB et al. 2012. Mol Biol Rep 39:8465-8473     Reference: March 16th, 2020
Gene Product: March 12th, 2020
Variation: December 15th, 2018
Gene Model: December 15th, 2018
18 days agohak4 high-affinity potassium transporter4: encodes a Na+-selective transporter
 
GRMZM2G425999
Zhang, ZB et al. 2012. Mol Biol Rep 39:8465-8473     Reference: March 16th, 2020
Gene Product: March 12th, 2020
Gene Model: December 10th, 2019
18 days agolac11 laccase11:
 
GRMZM2G305526
Liu, MY et al. 2020. J Genet 99:23     Reference: March 16th, 2020
Gene Product: March 31st, 2018
Gene Model: March 3rd, 2020
18 days agolac12 laccase12:
 
GRMZM5G814718
Liu, MY et al. 2020. J Genet 99:23     Reference: March 16th, 2020
Gene Product: March 31st, 2018
Gene Model: March 3rd, 2020
18 days agolac13 laccase13:
 
GRMZM2G166857
Liu, MY et al. 2020. J Genet 99:23     Reference: March 16th, 2020
Gene Product: March 31st, 2018
Gene Model: March 3rd, 2020
18 days agolac14 laccase14:
 
AC234190.1_FG002
Liu, MY et al. 2020. J Genet 99:23     Reference: March 16th, 2020
Gene Product: March 31st, 2018
Gene Model: March 3rd, 2020
18 days agolac15 laccase15:
 
GRMZM2G072808
Liu, MY et al. 2020. J Genet 99:23     Reference: March 16th, 2020
Gene Product: March 31st, 2018
Gene Model: March 3rd, 2020
18 days agolac16 laccase16:
 
GRMZM5G870184
Liu, MY et al. 2020. J Genet 99:23     Reference: March 16th, 2020
Gene Product: March 31st, 2018
Gene Model: March 3rd, 2020
18 days agolac17 laccase17:
 
GRMZM2G309594
Liu, MY et al. 2020. J Genet 99:23     Reference: March 16th, 2020
Gene Product: March 31st, 2018
Gene Model: March 3rd, 2020
18 days agolac18 laccase18:
 
GRMZM2G388587
Liu, MY et al. 2020. J Genet 99:23     Reference: March 16th, 2020
Gene Product: March 31st, 2018
Gene Model: March 3rd, 2020
18 days agolac19 laccase19:
 
GRMZM2G320786
Liu, MY et al. 2020. J Genet 99:23     Reference: March 16th, 2020
Gene Product: March 31st, 2018
Gene Model: March 3rd, 2020
18 days agolac20 laccase20:
 
GRMZM5G800488
Liu, MY et al. 2020. J Genet 99:23     Reference: March 16th, 2020
Gene Product: March 31st, 2018
Gene Model: March 3rd, 2020
18 days agolac21 laccase21:
 
GRMZM2G447271
Liu, MY et al. 2020. J Genet 99:23     Reference: March 16th, 2020
Gene Product: March 31st, 2018
Gene Model: March 3rd, 2020
18 days agolac22 laccase22:
 
GRMZM2G336337
Liu, MY et al. 2020. J Genet 99:23     Reference: March 16th, 2020
Gene Product: March 31st, 2018
Gene Model: March 3rd, 2020
18 days agolac23 laccase23:
 
GRMZM2G094375
Liu, MY et al. 2020. J Genet 99:23     Reference: March 16th, 2020
Gene Product: March 31st, 2018
Gene Model: March 3rd, 2020
18 days agohak2 potassium high-affinity transporter2:
 
AC233953.1_FG005
Zhang, ZB et al. 2012. Mol Biol Rep 39:8465-8473     Reference: March 16th, 2020
Gene Product: March 12th, 2020
Gene Model: March 12th, 2020
18 days agohak3 potassium high-affinity transporter3:
 
GRMZM2G477457
Zhang, ZB et al. 2012. Mol Biol Rep 39:8465-8473     Reference: March 16th, 2020
Gene Product: March 12th, 2020
Gene Model: March 12th, 2020
18 days agohak7 potassium high-affinity transporter7:
 
GRMZM2G020766
Zhang, ZB et al. 2012. Mol Biol Rep 39:8465-8473     Reference: March 16th, 2020
Gene Product: March 12th, 2020
Gene Model: March 12th, 2020
18 days agohak9 potassium high-affinity transporter9:
 
GRMZM2G166738
Zhang, ZB et al. 2012. Mol Biol Rep 39:8465-8473     Reference: March 16th, 2020
Gene Product: March 12th, 2020
Gene Model: March 12th, 2020
18 days agohak10 potassium high-affinity transporter10:
 
GRMZM2G443728
Zhang, ZB et al. 2012. Mol Biol Rep 39:8465-8473     Reference: March 16th, 2020
Gene Product: March 12th, 2020
Gene Model: March 12th, 2020
18 days agohak11 potassium high-affinity transporter11:
 
GRMZM2G005040
Zhang, ZB et al. 2012. Mol Biol Rep 39:8465-8473     Reference: March 16th, 2020
Gene Product: March 12th, 2020
Gene Model: March 12th, 2020
18 days agohak12 potassium high-affinity transporter12:
 
GRMZM2G009353
Zhang, ZB et al. 2012. Mol Biol Rep 39:8465-8473     Reference: March 16th, 2020
Gene Product: March 12th, 2020
Gene Model: March 12th, 2020
18 days agohak13 potassium high-affinity transporter13:
 
GRMZM2G146140
Zhang, ZB et al. 2012. Mol Biol Rep 39:8465-8473     Reference: March 16th, 2020
Gene Product: March 12th, 2020
Gene Model: March 12th, 2020
18 days agohak15 potassium high-affinity transporter15:
 
GRMZM2G121063
Zhang, ZB et al. 2012. Mol Biol Rep 39:8465-8473     Reference: March 16th, 2020
Gene Product: March 12th, 2020
Gene Model: March 12th, 2020
18 days agohak16 potassium high-affinity transporter16:
 
GRMZM2G084486
Zhang, ZB et al. 2012. Mol Biol Rep 39:8465-8473     Reference: March 16th, 2020
Gene Product: March 12th, 2020
Gene Model: March 12th, 2020
18 days agohak6 potassium high-affinity transporter6:
 
GRMZM2G097505
Zhang, ZB et al. 2012. Mol Biol Rep 39:8465-8473     Reference: March 16th, 2020
Gene Product: March 12th, 2020
Gene Model: March 12th, 2020
18 days agohak17 potassium high-affinity transporter17:
 
GRMZM2G088964
Zhang, ZB et al. 2012. Mol Biol Rep 39:8465-8473     Reference: March 16th, 2020
Gene Product: March 12th, 2020
Gene Model: March 12th, 2020
18 days agohak18 potassium high-affinity transporter18:
 
GRMZM2G086389
Zhang, ZB et al. 2012. Mol Biol Rep 39:8465-8473     Reference: March 16th, 2020
Gene Product: March 12th, 2020
Gene Model: March 12th, 2020
18 days agohak19 potassium high-affinity transporter19:
 
GRMZM2G021725
Zhang, ZB et al. 2012. Mol Biol Rep 39:8465-8473     Reference: March 16th, 2020
Gene Product: March 12th, 2020
Gene Model: March 12th, 2020
18 days agohak20 potassium high-affinity transporter20:
 
GRMZM2G395267
Zhang, ZB et al. 2012. Mol Biol Rep 39:8465-8473     Reference: March 16th, 2020
Gene Product: March 12th, 2020
Gene Model: March 12th, 2020
18 days agohak22 potassium high-affinity transporter22:
 
GRMZM2G409771
Zhang, ZB et al. 2012. Mol Biol Rep 39:8465-8473     Reference: March 16th, 2020
Gene Product: March 12th, 2020
Gene Model: March 12th, 2020
18 days agohak21 potassium high-affinity transporter21:
 
GRMZM2G438960
Zhang, ZB et al. 2012. Mol Biol Rep 39:8465-8473     Reference: March 16th, 2020
Gene Product: March 12th, 2020
Gene Model: March 12th, 2020
18 days agohak23 potassium high-affinity transporter23:
 
GRMZM2G036916
Zhang, ZB et al. 2012. Mol Biol Rep 39:8465-8473     Reference: March 16th, 2020
Gene Product: March 12th, 2020
Gene Model: March 12th, 2020
18 days agohak24 potassium high-affinity transporter24:
 
GRMZM2G120163
Zhang, ZB et al. 2012. Mol Biol Rep 39:8465-8473     Reference: March 16th, 2020
Gene Product: March 12th, 2020
Gene Model: March 12th, 2020
18 days agohak25 potassium high-affinity transporter25:
 
GRMZM2G375116
Zhang, ZB et al. 2012. Mol Biol Rep 39:8465-8473     Reference: March 16th, 2020
Gene Product: March 12th, 2020
Gene Model: March 12th, 2020
18 days agohak26 potassium high-affinity transporter26:
 
   Zhang, ZB et al. 2012. Mol Biol Rep 39:8465-8473     Reference: March 16th, 2020
Gene Product: March 12th, 2020
18 days agohak27 potassium high-affinity transporter27:
 
GRMZM2G455817
Zhang, ZB et al. 2012. Mol Biol Rep 39:8465-8473     Reference: March 16th, 2020
Gene Product: March 12th, 2020
Gene Model: March 12th, 2020
18 days agolac7 laccase7:
 
GRMZM2G400390
Liu, MY et al. 2020. J Genet 99:23     Reference: March 16th, 2020
Gene Product: March 31st, 2018
Gene Model: March 16th, 2020
19 days agoumc1285  :
2.07
GRMZM2G050861
    Variation: September 1st, 2003
Gene Model: March 15th, 2020
19 days agoIDP1415  : similar to Arabidopsis Glycolipid transfer protein (GLTP) family protein
2.04
GRMZM2G021834
    Variation: March 31st, 2005
Gene Model: March 15th, 2020
20 days agofax2 fatty acid export2: candidate gene for pericarp thickness
 
GRMZM2G143389
Wu, XM et al. 2020. BMC Plant Biology pp.doi: 10.1186/s12870-020-2295-8     Reference: March 14th, 2020
Gene Product: March 14th, 2020
Gene Model: March 14th, 2020
20 days agofax1 fatty acid export1:
 
GRMZM2G046529
Wu, XM et al. 2020. BMC Plant Biology pp.doi: 10.1186/s12870-020-2295-8   At3g57280 (TAIR) Reference: March 14th, 2020
Gene Product: March 14th, 2020
Gene Model: March 14th, 2020
21 days agocsu861  :
2.03
GRMZM2G001241
    Variation: September 1st, 2003
Gene Model: March 13th, 2020
23 days agoereb53 AP2-EREBP-transcription factor 53: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Masters, A et al. 2020. Journal of Visual Experiments 156:e60782   LOC_Os1g67410 (MSU/TIGR) Reference: March 11th, 2020
Gene Product: July 5th, 2019
23 days agohb122 Homeobox-transcription factor 122: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Masters, A et al. 2020. Journal of Visual Experiments 156:e60782     Reference: March 11th, 2020
Gene Product: August 25th, 2017
27 days agoy1 yellow endosperm1: reduced carotenoid pigments in endosperm; some alleles affect chlorophyll in seedlings (e.g. y1-8549, y1-pb)
6.01
GRMZM2G300348
Alves, ML et al. 2020. J Agric Food Chem pp.doi: 10.1021/acs.jafc.9b07190     Reference: March 7th, 2020
Gene Product: December 14th, 2011
Variation: August 26th, 2014
Gene Model: September 22nd, 2011
27 days agovte4 vitamin E synthesis4:
5.06
GRMZM2G035213
Alves, ML et al. 2020. J Agric Food Chem pp.doi: 10.1021/acs.jafc.9b07190     Reference: March 7th, 2020
Gene Product: June 26th, 2013
Gene Model: June 26th, 2013
28 days agoct2 compact plant2: semi-dwarf plant, 1/3 height; shortened internodes; club tassel, fasciated ear
1.01 - 1.02
GRMZM2G064732
Zhou, ZP et al. 2020. Plant Breed pp.doi: 10.1111/pbr.12809     Reference: March 6th, 2020
Gene Product: September 16th, 2013
Variation: September 20th, 2013
Gene Model: September 16th, 2013
28 days agomn1 miniature seed1: small, somewhat defective kernel, fully viable; invertase reduced
2.04
   Zhou, ZP et al. 2020. Plant Breed pp.doi: 10.1111/pbr.12809     Reference: March 6th, 2020
Gene Product: June 12th, 2018
Variation: April 13th, 2015
28 days agoo11 opaque endosperm11: thin, opaque, somewhat shrunken kernels with greyish cast
 
GRMZM2G147685
Zhou, ZP et al. 2020. Plant Breed pp.doi: 10.1111/pbr.12809   AT1G49770 (TAIR) Reference: March 6th, 2020
Gene Product: September 14th, 2016
Variation: February 8th, 2018
Gene Model: February 8th, 2018
28 days agotb1 teosinte branched1: many tillers; ear branches tassel-like; affects apical dominanceGRASSIUS: TCP transcription factor (TCP1)
1.09
   Zhou, ZP et al. 2020. Plant Breed pp.doi: 10.1111/pbr.12809     Reference: March 6th, 2020
Gene Product: September 14th, 2016
Variation: February 2nd, 2017
28 days agotd1 thick tassel dwarf1: shortened plants, fasciated ears, increased spikelet density in tassel
5.03
GRMZM2G300133
Zhou, ZP et al. 2020. Plant Breed pp.doi: 10.1111/pbr.12809     Reference: March 6th, 2020
Gene Product: October 22nd, 2012
Variation: October 23rd, 2012
Gene Model: October 22nd, 2012
28 days agoincw3 invertase cell wall3: genomic sequence (GenBank); SSR umc1053
10.04
   Zhou, ZP et al. 2020. Plant Breed pp.doi: 10.1111/pbr.12809     Reference: March 6th, 2020
Gene Product: June 12th, 2018
Variation: October 7th, 2015
28 days agoemp2 empty pericarp 2: germless, unfilled kernel
2.06
   Zhou, ZP et al. 2020. Plant Breed pp.doi: 10.1111/pbr.12809     Reference: March 6th, 2020
Variation: September 21st, 2011
28 days agocadtfr5 CCAAT-DR1-transcription factor 5: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Zhou, ZP et al. 2020. Plant Breed pp.doi: 10.1111/pbr.12809     Reference: March 6th, 2020
Gene Product: August 9th, 2016
28 days agoub2 unbranched2: double mutant shows decrease in tassel branch number
 
   Zhou, ZP et al. 2020. Plant Breed pp.doi: 10.1111/pbr.12809     Reference: March 6th, 2020
Gene Product: July 5th, 2019
Variation: December 17th, 2014
28 days agozfl2 Zea floricaula leafy2: zfl1 and zfl2 double mutants exhibit a disruption of floral organ identity and patterning, as well as defects in inflorescence architecture and in the vegetative to reproductive phase transition.
2.02
   Zhou, ZP et al. 2020. Plant Breed pp.doi: 10.1111/pbr.12809     Reference: March 6th, 2020
Variation: October 9th, 2014
28 days agobri1a brassinosteroid insensitive1a: Encodes a brassinosteroid receptor
 
GRMZM2G048294
Zhou, ZP et al. 2020. Plant Breed pp.doi: 10.1111/pbr.12809   AT4G39400 (TAIR)
LOC_Os01g52050 (MSU/TIGR)
Reference: March 6th, 2020
Variation: July 17th, 2015
Gene Model: July 16th, 2015
28 days agocle7 clavata3/esr-related7: mutants have fasciated ears
 
GRMZM2G372364
Tran, QH et al. 2020. Genes 11:281     Reference: March 6th, 2020
Variation: March 6th, 2020
Gene Model: September 15th, 2016
28 days agoincw5 invertase cell wall5:
 
GRMZM2G095725
Zhou, ZP et al. 2020. Plant Breed pp.doi: 10.1111/pbr.12809   LOC_Os04g33740 (MSU/TIGR) Reference: March 6th, 2020
Gene Product: June 12th, 2018
Variation: August 16th, 2017
Gene Model: August 16th, 2017
28 days agopmei50 pectin methylesterase inhibitor50:
 
AC194254.3_FG004
Tran, QH et al. 2020. Genes 11:281     Reference: March 6th, 2020
Gene Product: January 8th, 2019
Gene Model: March 6th, 2020
29 days agowi5 wilted5: mutant plants displayed a drought-sensitive phenotype, with wilting and progressive leaf chlorosis after the 3-leaf stage
 
GRMZM2G002260
Hu, X et al. 2020. J Integr Plant Biol pp.doi: 10.1111/jipb.12923     Reference: March 4th, 2020
Gene Product: March 4th, 2020
Variation: March 5th, 2020
Gene Model: March 4th, 2020
30 days agoadf1 actin depolymerizing factor1: pollen-specific cDNA similar to vertebrate actin polymerization/depolymerization factors
7.03
   Huang, J et al. 2020. Int J Mol Sci 21:1751     Reference: March 4th, 2020
Gene Product: September 1st, 2003
Variation: July 22nd, 2015
30 days agoadf4 Actin-depolymerizing factor 4:
6.01
   Huang, J et al. 2020. Int J Mol Sci 21:1751     Reference: March 4th, 2020
Gene Product: March 4th, 2020
30 days agoadf5 actin depolymerizing factor5:
1.03
GRMZM2G077942
Huang, J et al. 2020. Int J Mol Sci 21:1751     Reference: March 4th, 2020
Gene Product: March 4th, 2020
Variation: March 4th, 2016
Gene Model: March 3rd, 2016
30 days agoxyl5 xylanase5: NCBI:putative glycosyl hydrolase family 10
1.03
GRMZM2G108032
Hu, X et al. 2020. J Integr Plant Biol pp.doi: 10.1111/jipb.12923     Reference: March 4th, 2020
Gene Product: March 4th, 2020
Variation: October 29th, 2016
Gene Model: October 30th, 2016
30 days agoadf2 actin depolymerizing factor2: pollen-specific cDNA similar to vertebrate actin polymerization/depolymerization factors
7.03
GRMZM2G097122
Huang, J et al. 2020. Int J Mol Sci 21:1751     Reference: March 4th, 2020
Gene Product: September 1st, 2003
Variation: July 22nd, 2015
Gene Model: July 22nd, 2015
30 days agoxyl2 xylanase2: encoded by one or few genes.
9.06
GRMZM5G850567
Hu, X et al. 2020. J Integr Plant Biol pp.doi: 10.1111/jipb.12923     Reference: March 4th, 2020
Gene Product: March 4th, 2020
Gene Model: October 15th, 2018
30 days agoadf3 actin depolymerizing factor3: leaf cDNA similar to vertebrate actin polymerization/depolymerization factors, not expressed in pollen; expressed in E. coli; two copies detected in Southerns and by one overgo (PCO115125a in ctg64, 1L; PCO115125b in ctg204, 5S), which are syntenous regions.
1.11
GRMZM2G060702
Huang, J et al. 2020. Int J Mol Sci 21:1751     Reference: March 4th, 2020
Gene Product: March 4th, 2020
Variation: October 19th, 2017
Gene Model: October 19th, 2017
30 days agoadf12 actin depolymerizing factor12:
2.03
GRMZM2G064875
Huang, J et al. 2020. Int J Mol Sci 21:1751     Reference: March 4th, 2020
Gene Product: March 4th, 2020
Gene Model: March 4th, 2020
30 days agoxyn10 xylanase/glycosyl hydrolase10:
 
GRMZM2G031004
Hu, X et al. 2020. J Integr Plant Biol pp.doi: 10.1111/jipb.12923   AT1G58370 (TAIR) Reference: March 4th, 2020
Gene Product: March 4th, 2020
Gene Model: March 24th, 2016
30 days agoxyl1 xylanase1: Encodes an endoxylanase synthesized by a tapetum mRNA; predominant protein on the surface of maize pollen
 
GRMZM2G170839
Hu, X et al. 2020. J Integr Plant Biol pp.doi: 10.1111/jipb.12923     Reference: March 4th, 2020
Gene Product: March 4th, 2020
Variation: October 17th, 2018
Gene Model: October 15th, 2018
30 days agoadf6 actin depolymerizing factor6:
 
GRMZM2G130678
Huang, J et al. 2020. Int J Mol Sci 21:1751     Reference: March 4th, 2020
Gene Product: March 4th, 2020
Gene Model: March 4th, 2020
30 days agoadf7 actin depolymerizing factor7:
 
GRMZM2G463471
Huang, J et al. 2020. Int J Mol Sci 21:1751     Reference: March 4th, 2020
Gene Product: March 4th, 2020
Gene Model: March 4th, 2020
30 days agoadf8 actin depolymerizing factor8:
 
GRMZM2G147775
Huang, J et al. 2020. Int J Mol Sci 21:1751     Reference: March 4th, 2020
Gene Product: March 4th, 2020
Gene Model: March 4th, 2020
30 days agoadf9 actin depolymerizing factor9:
 
GRMZM2G108807
Huang, J et al. 2020. Int J Mol Sci 21:1751     Reference: March 4th, 2020
Gene Product: March 4th, 2020
Gene Model: March 4th, 2020
30 days agoadf10 actin depolymerizing factor10:
 
GRMZM2G002825
Huang, J et al. 2020. Int J Mol Sci 21:1751     Reference: March 4th, 2020
Gene Product: March 4th, 2020
Gene Model: March 4th, 2020
30 days agoadf11 actin depolymerizing factor11:
 
GRMZM2G064875
Huang, J et al. 2020. Int J Mol Sci 21:1751     Reference: March 4th, 2020
Gene Product: March 4th, 2020
Gene Model: March 4th, 2020
30 days agoadf13 actin depolymerizing factor13:
 
GRMZM2G015127
Huang, J et al. 2020. Int J Mol Sci 21:1751     Reference: March 4th, 2020
Gene Product: March 4th, 2020
Gene Model: March 4th, 2020
30 days agoxyl6 xylanase6:
 
AC204711.3_FG002
Hu, X et al. 2020. J Integr Plant Biol pp.doi: 10.1111/jipb.12923     Reference: March 4th, 2020
Gene Product: March 4th, 2020
Gene Model: March 4th, 2020
30 days agoxyl9 xylanase9:
 
GRMZM2G055101
Hu, X et al. 2020. J Integr Plant Biol pp.doi: 10.1111/jipb.12923     Reference: March 4th, 2020
Gene Product: March 4th, 2020
Gene Model: March 4th, 2020
30 days agoxyl7 xylanase7:
 
GRMZM2G058128
Hu, X et al. 2020. J Integr Plant Biol pp.doi: 10.1111/jipb.12923     Reference: March 4th, 2020
Gene Product: March 4th, 2020
Gene Model: March 4th, 2020
30 days agoxyl4 xylanase4:
 
GRMZM2G004856
Hu, X et al. 2020. J Integr Plant Biol pp.doi: 10.1111/jipb.12923     Reference: March 4th, 2020
Gene Product: March 4th, 2020
Gene Model: March 4th, 2020
30 days agoxyl3 xylanase3: genomic clone
9.07
GRMZM2G048375
Hu, X et al. 2020. J Integr Plant Biol pp.doi: 10.1111/jipb.12923     Reference: March 4th, 2020
Gene Product: March 4th, 2020
Variation: April 21st, 2017
Gene Model: April 21st, 2017
30 days agoxyl8 xylanase8:
 
GRMZM2G003794
Hu, X et al. 2020. J Integr Plant Biol pp.doi: 10.1111/jipb.12923     Reference: March 4th, 2020
Gene Product: March 4th, 2020
Gene Model: March 4th, 2020
31 days agoiaa38 Aux/IAA-transcription factor 38: similar to Arabidopsis auxin-responsive protein IAA27Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
8.04
GRMZM2G035465
Ramos Baez, R et al. 2020. Plant Physiol pp.doi: 10.1104/pp.19.01475     Reference: March 3rd, 2020
Variation: September 1st, 2003
Gene Model: September 19th, 2018
31 days agoiaa11 Aux/IAA-transcription factor 11: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
3.04
GRMZM2G167794
Ramos Baez, R et al. 2020. Plant Physiol pp.doi: 10.1104/pp.19.01475     Reference: March 3rd, 2020
Variation: September 1st, 2003
Gene Model: April 2nd, 2018
31 days agoiaa4 Aux/IAA-transcription factor4: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
1.10
GRMZM2G159285
Ramos Baez, R et al. 2020. Plant Physiol pp.doi: 10.1104/pp.19.01475     Reference: March 3rd, 2020
Variation: November 15th, 2016
Gene Model: November 15th, 2016
31 days agoiaa28 Aux/IAA-transcription factor 28: gene product physically interacts with LA1 (Dong et al 2013)Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Ramos Baez, R et al. 2020. Plant Physiol pp.doi: 10.1104/pp.19.01475     Reference: March 3rd, 2020
Variation: July 8th, 2017
31 days agophyB1 phytochromeB1: phyB1 mutants have elongated mesocotyl under red light. Double mutant with phyB2 is pale, narrow with elongated leaf blades, elongated internodes, less anthocyanin in sheath tissues, and earlier flowering time.
1.03
   Wies, G; Maddonni, GA. 2020. Field Crop Res 250:107765     Reference: March 3rd, 2020
Gene Product: October 24th, 2007
Variation: February 1st, 2015
31 days agophyB2 phytochromeB2: phyB2 mutant is early flowering. Double mutant with phyB1 is pale, narrow with elongated leaf blades and elongated internodes, and contains less anthocyanin in sheath tissues.
9.05
   Wies, G; Maddonni, GA. 2020. Field Crop Res 250:107765     Reference: March 3rd, 2020
Gene Product: October 24th, 2007
Variation: January 11th, 2013
31 days agorum1 rootless with undetectable meristems1: primordia for seminal roots and for laterals on the primary root absent
 
GRMZM2G037368
Ramos Baez, R et al. 2020. Plant Physiol pp.doi: 10.1104/pp.19.01475     Reference: March 3rd, 2020
Gene Product: June 16th, 2014
Variation: June 16th, 2014
Gene Model: June 16th, 2014
31 days agorul1 rum1-like1:
 
GRMZM2G163848
Ramos Baez, R et al. 2020. Plant Physiol pp.doi: 10.1104/pp.19.01475     Reference: March 3rd, 2020
Variation: November 18th, 2011
Gene Model: November 17th, 2011
31 days agotrpp12 trehalose-6-phosphate phosphatase12:
 
GRMZM2G178546
Acosta-Perez, P et al. 2020. Plants 9:315     Reference: March 3rd, 2020
Gene Product: September 15th, 2013
Gene Model: September 15th, 2013
31 days agotrps5 trehalose-6-phosphate synthase5:
 
GRMZM2G527891
Acosta-Perez, P et al. 2020. Plants 9:315     Reference: March 3rd, 2020
Gene Product: September 15th, 2013
Gene Model: September 15th, 2013
31 days agotrps6 trehalose-6-phosphate synthase6:
 
GRMZM2G304274
Acosta-Perez, P et al. 2020. Plants 9:315     Reference: March 3rd, 2020
Gene Product: September 15th, 2013
Gene Model: September 15th, 2013
31 days agotrps7 trehalose-6-phosphate synthase7:
 
GRMZM2G123277
Acosta-Perez, P et al. 2020. Plants 9:315     Reference: March 3rd, 2020
Gene Product: September 15th, 2013
Gene Model: September 15th, 2013
35 days agogl2 glossy2: like gl1, but surface wax is all rice-grain-type particles
2.02
   Alexander, LE et al. bioRxiv preprint pp.doi: 10.1101/2020.02.27.968321   AT4G24510 (TAIR) Reference: February 28th, 2020
Gene Product: February 28th, 2020
Variation: December 7th, 2012
35 days agonactf36 NAC-transcription factor 36: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
2.04
GRMZM2G081930
Wang, GR et al. 2020. Physiol Mol Biol Plants doi: 10.1007/s12298-020-00770-w     Reference: February 28th, 2020
Variation: September 1st, 2003
Gene Model: February 15th, 2018
35 days agonactf43 NAC-transcription factor43: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.NCBI: NAC domain-containing protein 67-like
1.05
GRMZM2G082709
Wang, GR et al. 2020. Physiol Mol Biol Plants doi: 10.1007/s12298-020-00770-w     Reference: February 28th, 2020
Variation: September 1st, 2003
Gene Model: November 15th, 2016
35 days agonactf108 NAC-transcription factor 108: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.functions as a negative regulator of the stay‐green trait
 
   Wang, GR et al. 2020. Physiol Mol Biol Plants doi: 10.1007/s12298-020-00770-w     Reference: February 28th, 2020
Gene Product: July 8th, 2019
Variation: May 4th, 2019
35 days agonactf46 NAC-transcription factor 46: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Wang, GR et al. 2020. Physiol Mol Biol Plants doi: 10.1007/s12298-020-00770-w     Reference: February 28th, 2020
Gene Product: July 8th, 2019
35 days agonactf49 NAC-transcription factor 49: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Wang, GR et al. 2020. Physiol Mol Biol Plants doi: 10.1007/s12298-020-00770-w     Reference: February 28th, 2020
Gene Product: July 8th, 2019
Variation: March 3rd, 2017
35 days agonactf8 NAC-transcription factor 8: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Wang, GR et al. 2020. Physiol Mol Biol Plants doi: 10.1007/s12298-020-00770-w     Reference: February 28th, 2020
Gene Product: July 8th, 2019
35 days agonactf82 NAC-transcription factor 82: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Wang, GR et al. 2020. Physiol Mol Biol Plants doi: 10.1007/s12298-020-00770-w     Reference: February 28th, 2020
Gene Product: July 8th, 2019
Variation: September 30th, 2018
35 days agonactf99 NAC-transcription factor 99: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
GRMZM2G078954
Wang, GR et al. 2020. Physiol Mol Biol Plants doi: 10.1007/s12298-020-00770-w     Reference: February 28th, 2020
Gene Product: July 8th, 2019
Gene Model: May 28th, 2019
35 days agombd123 methyl binding domain123:
10.06
GRMZM2G119802
Qian, YX et al. 2020. Plant Biotechnol Rep doi: 10.1007/s11816-020-00607-8     Reference: February 28th, 2020
Gene Product: December 24th, 2015
Variation: December 15th, 2017
Gene Model: December 15th, 2017
35 days agonactf53 NAC-transcription factor 53: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
1.01
GRMZM2G059428
Wang, GR et al. 2020. Physiol Mol Biol Plants doi: 10.1007/s12298-020-00770-w     Reference: February 28th, 2020
Variation: May 6th, 2016
Gene Model: May 6th, 2016
35 days agonactf48 NAC-transcription factor 48: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
1.06
GRMZM2G054252
Wang, GR et al. 2020. Physiol Mol Biol Plants doi: 10.1007/s12298-020-00770-w     Reference: February 28th, 2020
Variation: January 27th, 2017
Gene Model: January 27th, 2017
35 days agombd101 methyl binding domain101:
8.04
GRMZM2G040131
Qian, YX et al. 2020. Plant Biotechnol Rep doi: 10.1007/s11816-020-00607-8     Reference: February 28th, 2020
Gene Product: December 24th, 2015
Variation: September 25th, 2007
Gene Model: December 24th, 2015
35 days agombd120 methyl binding domain120:
6.05
GRMZM2G069254
Qian, YX et al. 2020. Plant Biotechnol Rep doi: 10.1007/s11816-020-00607-8     Reference: February 28th, 2020
Gene Product: December 24th, 2015
Variation: April 27th, 2018
Gene Model: July 7th, 2015
35 days agombd106 methyl binding domain106:
1.05
GRMZM2G022365
Qian, YX et al. 2020. Plant Biotechnol Rep doi: 10.1007/s11816-020-00607-8     Reference: February 28th, 2020
Gene Product: December 24th, 2015
Variation: February 6th, 2010
Gene Model: December 24th, 2015
35 days agombd108 methyl binding domain108:
7.03
GRMZM2G168269
Qian, YX et al. 2020. Plant Biotechnol Rep doi: 10.1007/s11816-020-00607-8     Reference: February 28th, 2020
Gene Product: December 24th, 2015
Variation: September 1st, 2003
Gene Model: December 24th, 2015
35 days agombd121 methyl binding domain121:
4.08
GRMZM5G812738
Springer, N; Kaeppler, SM. 2005. Plant Physiol 138:92-104     Reference: February 3rd, 2010
Gene Product: December 24th, 2015
Variation: September 11th, 2007
Gene Model: February 28th, 2020
35 days agombd115 methyl binding domain115:
1.09
GRMZM2G157470
Qian, YX et al. 2020. Plant Biotechnol Rep doi: 10.1007/s11816-020-00607-8     Reference: February 28th, 2020
Gene Product: December 24th, 2015
Variation: February 5th, 2010
Gene Model: December 24th, 2015
35 days agombd122 methyl binding domain122:
4.04
GRMZM2G377369
Qian, YX et al. 2020. Plant Biotechnol Rep doi: 10.1007/s11816-020-00607-8     Reference: February 28th, 2020
Gene Product: December 24th, 2015
Variation: February 5th, 2010
Gene Model: February 28th, 2020
35 days agoras18A1 ras-related protein18A1:
 
GRMZM2G176677
Wang, GR et al. 2020. Physiol Mol Biol Plants doi: 10.1007/s12298-020-00770-w     Reference: February 28th, 2020
Variation: January 24th, 2011
Gene Model: July 22nd, 2014
35 days agogll1 glossy2-like1: strong homology to maize gl2 and Arabidopsis cer2.
 
GRMZM2G315767
Alexander, LE et al. bioRxiv preprint pp.doi: 10.1101/2020.02.27.968321   AT4G13840 (TAIR) Reference: February 28th, 2020
Gene Product: February 28th, 2020
Gene Model: February 28th, 2020
35 days agombd103 methyl binding domain103:
 
AC217264.3_FG001
Qian, YX et al. 2020. Plant Biotechnol Rep doi: 10.1007/s11816-020-00607-8     Reference: February 28th, 2020
Gene Product: December 24th, 2015
Gene Model: February 28th, 2020
35 days agombd125 methyl binding domain125:
 
GRMZM2G090163
Qian, YX et al. 2020. Plant Biotechnol Rep doi: 10.1007/s11816-020-00607-8     Reference: February 28th, 2020
Gene Product: December 24th, 2015
Gene Model: February 28th, 2020
35 days agombd126 methyl binding domain126:
 
GRMZM2G161447
Qian, YX et al. 2020. Plant Biotechnol Rep doi: 10.1007/s11816-020-00607-8     Reference: February 28th, 2020
Gene Product: December 24th, 2015
Gene Model: February 28th, 2020
35 days agombd102 methyl binding domain102:
 
GRMZM5G847045
Qian, YX et al. 2020. Plant Biotechnol Rep doi: 10.1007/s11816-020-00607-8     Reference: February 28th, 2020
Gene Product: December 24th, 2015
Gene Model: February 28th, 2020
35 days agonactf23 NAC-transcription factor 23: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models. similar to protein ATAF2 of A. thaliana
8.08
GRMZM2G068973
Wang, GR et al. 2020. Physiol Mol Biol Plants doi: 10.1007/s12298-020-00770-w     Reference: February 28th, 2020
Variation: March 31st, 2005
Gene Model: June 14th, 2019
35 days agombd113 methyl binding domain113:
10.04
GRMZM2G126545
Qian, YX et al. 2020. Plant Biotechnol Rep doi: 10.1007/s11816-020-00607-8     Reference: February 28th, 2020
Gene Product: December 24th, 2015
Variation: February 3rd, 2010
Gene Model: December 24th, 2015
35 days agombd111 methyl binding domain111:
2.07
GRMZM2G025095
Qian, YX et al. 2020. Plant Biotechnol Rep doi: 10.1007/s11816-020-00607-8     Reference: February 28th, 2020
Gene Product: December 24th, 2015
Variation: January 29th, 2010
Gene Model: December 24th, 2015
36 days agorap2 rap2.7 orthologue: negative regulator of flowering time; vgt1 acts as an enhancer (Salvi et al. 2007)
8.06
GRMZM2G700665
Azodi, CB; Pardo, J; VanBuren, R; de los Campos, G; Shiu, SH. 2019. Plant Cell. 0:doi: 10.1105/tpc.19.00332     Reference: February 27th, 2020
Gene Product: July 5th, 2019
Variation: July 24th, 2019
Gene Model: November 20th, 2012
36 days agopebp2 phosphatidylethanolamine-binding protein2:
 
   Azodi, CB; Pardo, J; VanBuren, R; de los Campos, G; Shiu, SH. 2019. Plant Cell. 0:doi: 10.1105/tpc.19.00332     Reference: February 27th, 2020
Variation: December 15th, 2010
36 days agopebp4 phosphatidylethanolamine-binding protein4:
 
   Azodi, CB; Pardo, J; VanBuren, R; de los Campos, G; Shiu, SH. 2019. Plant Cell. 0:doi: 10.1105/tpc.19.00332     Reference: February 27th, 2020
Variation: December 15th, 2010
36 days agopebp5 phosphatidylethanolamine-binding protein:
 
   Azodi, CB; Pardo, J; VanBuren, R; de los Campos, G; Shiu, SH. 2019. Plant Cell. 0:doi: 10.1105/tpc.19.00332     Reference: February 27th, 2020
Variation: January 31st, 2011
36 days agopebp8 phosphatidylethanolamine-binding protein8: florigen activity: complements Arabidopsis FT mutants, promoting flowering at short days. Requires functional id1 gene.(Lazakis et al 2011)
 
GRMZM2G179264
Azodi, CB; Pardo, J; VanBuren, R; de los Campos, G; Shiu, SH. 2019. Plant Cell. 0:doi: 10.1105/tpc.19.00332     Reference: February 27th, 2020
Gene Product: May 6th, 2011
Variation: June 19th, 2015
Gene Model: May 6th, 2011
36 days agopebp11 phosphatidylethanolamine-binding protein11:
 
   Doll, NM, et al. 2020. Plant Cell. 0:doi: 10.1105/tpc.19.00756     Reference: February 27th, 2020
Variation: December 10th, 2010
36 days agopebp24 phosphatidylethanolamine-binding protein24:
 
GRMZM2G440005
Azodi, CB; Pardo, J; VanBuren, R; de los Campos, G; Shiu, SH. 2019. Plant Cell. 0:doi: 10.1105/tpc.19.00332     Reference: February 27th, 2020
Variation: December 14th, 2010
Gene Model: July 28th, 2016
36 days agoid1 indeterminate growth1: requires extended growth for flowering; vegetatively totipotent with gt1 and factors for perennialism
1.08
   Azodi, CB; Pardo, J; VanBuren, R; de los Campos, G; Shiu, SH. 2019. Plant Cell. 0:doi: 10.1105/tpc.19.00332     Reference: February 27th, 2020
Gene Product: January 3rd, 2015
Variation: August 3rd, 2015
36 days agoal9 aleurone9: aleurone specific cDNA, unknown function
8.08
GRMZM2G091006
Doll, NM, et al. 2020. Plant Cell. 0:doi: 10.1105/tpc.19.00756     Reference: February 27th, 2020
Variation: October 14th, 2009
Gene Model: January 14th, 2016
36 days agocct1 CO CO-LIKE TIMING OF CAB1 protein domain1: photoperiod response locus; confers later flowering in teosintes under longer day lengths; many maize inbred lines, including some adapted to tropical regions, have cct1 alleles insensitive to photoperiod (Hung et al 2012)
 
GRMZM2G381691
Azodi, CB; Pardo, J; VanBuren, R; de los Campos, G; Shiu, SH. 2019. Plant Cell. 0:doi: 10.1105/tpc.19.00332   AT5G24930 (TAIR)
LOC_Os07g15770 (MSU/TIGR)
Os07g0261200 (Gramene)
Reference: February 27th, 2020
Gene Product: June 18th, 2018
Variation: December 27th, 2017
Gene Model: July 17th, 2012
36 days agosweet15a sugars will eventually be exported transporter15a:
4.05
GRMZM2G168365
Doll, NM, et al. 2020. Plant Cell. 0:doi: 10.1105/tpc.19.00756     Reference: February 27th, 2020
Gene Product: November 4th, 2015
Variation: September 1st, 2003
Gene Model: November 3rd, 2015
36 days agodlf1 delayed flowering1: tall late plant with additional nodes and leaves at flowering; no apparent response to day length
 
   Azodi, CB; Pardo, J; VanBuren, R; de los Campos, G; Shiu, SH. 2019. Plant Cell. 0:doi: 10.1105/tpc.19.00332     Reference: February 27th, 2020
Gene Product: August 21st, 2018
Variation: February 6th, 2011
36 days agomads1 MADS1: transcripts detected in egg cells and invivo zygotes of maize, also expressed in synergids and antipodal cells. during flower development expressed in all ear spikelet organ primordia at intermediate stages
9.07
   Azodi, CB; Pardo, J; VanBuren, R; de los Campos, G; Shiu, SH. 2019. Plant Cell. 0:doi: 10.1105/tpc.19.00332     Reference: February 27th, 2020
Gene Product: September 1st, 2003
Variation: April 15th, 2008
36 days agolec1 LEC1 transcription factor1:
5.06
GRMZM2G011789
Doll, NM, et al. 2020. Plant Cell. 0:doi: 10.1105/tpc.19.00756     Reference: February 27th, 2020
Gene Product: August 9th, 2016
Gene Model: April 8th, 2011
36 days agozag6 agamous-like6: Encodes a MADS-box transcription factor homologous to SUPPRESSOR OF OVEREXPRESSION OF CONSTANS 1 that affects flowering time in Arabidopsis.
 
GRMZM2G026223
Azodi, CB; Pardo, J; VanBuren, R; de los Campos, G; Shiu, SH. 2019. Plant Cell. 0:doi: 10.1105/tpc.19.00332     Reference: February 27th, 2020
Variation: June 9th, 2014
Gene Model: June 9th, 2014
36 days agosweet14a sugars will eventually be exported transporter14a:
 
GRMZM2G094955
Doll, NM, et al. 2020. Plant Cell. 0:doi: 10.1105/tpc.19.00756     Reference: February 27th, 2020
Gene Product: November 4th, 2015
Gene Model: November 3rd, 2015
36 days agocct2 CO CO-LIKE TIMING OF CAB1 protein domain2: photoperiod response locus; confers later flowering in teosintes under longer day lengths; knockout mutant causes early flowering under long days
 
GRMZM2G004483
Azodi, CB; Pardo, J; VanBuren, R; de los Campos, G; Shiu, SH. 2019. Plant Cell. 0:doi: 10.1105/tpc.19.00332     Reference: February 27th, 2020
Gene Product: June 18th, 2018
Variation: December 27th, 2017
Gene Model: December 27th, 2017
36 days agotin1 tiller number1: variant has multiple tillers
 
GRMZM2G059088
Zhang, X, et al. 2019. Nature communications. 10:5608     Reference: February 27th, 2020
Gene Product: December 6th, 2019
Variation: December 6th, 2019
Gene Model: December 6th, 2019
36 days agoIDP781  :
5.03
GRMZM2G020146
Doll, NM, et al. 2020. Plant Cell. 0:doi: 10.1105/tpc.19.00756     Reference: February 27th, 2020
Variation: March 31st, 2005
Gene Model: February 24th, 2020
38 days agogex1 gamete expressed1: encodes protein with a core binding site for Dof transcription factors
 
GRMZM2G388045
Chen, JY, et al. 2017. Plant Cell. 0:doi: 10.1105/tpc.17.00099   AT5G55490 (TAIR) Reference: October 4th, 2017
Gene Product: February 25th, 2020
Gene Model: February 25th, 2020
39 days agod1 dwarf plant1: andromonoecious, short, compact plants; responds to gibberellins; d1-t intermediate in height
3.03
GRMZM2G036340
Knauer, S, et al. 2019. Genome Res. 0:doi: 10.1101/gr.250878.119     Reference: February 24th, 2020
Gene Product: October 25th, 2014
Variation: October 30th, 2014
Gene Model: October 2nd, 2012
39 days agohma3 heavy metal ATPase3: associated with leaf Cd concentration under various Cd levels at seedling and maturing stages
 
GRMZM2G175576
Knauer, S, et al. 2019. Genome Res. 0:doi: 10.1101/gr.250878.119     Reference: February 24th, 2020
Gene Product: October 23rd, 2019
Variation: November 21st, 2019
Gene Model: January 27th, 2018
39 days agoGRMZM2G059392  :
 
GRMZM2G059392
Knauer, S, et al. 2019. Genome Res. 0:doi: 10.1101/gr.250878.119   AT3G53450 (TAIR) Reference: February 24th, 2020
Gene Product: November 21st, 2019
Variation: November 21st, 2019
Gene Model: November 21st, 2019
39 days agoGRMZM2G472643  :
 
GRMZM2G472643
Knauer, S, et al. 2019. Genome Res. 0:doi: 10.1101/gr.250878.119   AT4G14580 (TAIR) Reference: February 24th, 2020
Variation: November 21st, 2019
Gene Model: November 21st, 2019
39 days agoGRMZM2G050234  :
 
GRMZM2G050234
Knauer, S, et al. 2019. Genome Res. 0:doi: 10.1101/gr.250878.119     Reference: February 24th, 2020
Variation: November 21st, 2019
Gene Model: November 21st, 2019
42 days agopgd3 phosphogluconate dehydrogenase3: single copy cDNA, csu843, similar to alfalfa enzyme; pentose phosphate pathway
4.03
GRMZM2G440208
Du, HY et al. 2020. Int J Mol Sci 21:1445     Reference: February 21st, 2020
Gene Product: September 1st, 2003
Variation: February 28th, 2013
Gene Model: July 28th, 2016
42 days agosum1 siroheme uroporphyrinogen methyltransferase1:
3.09
GRMZM2G105604
Du, HY et al. 2020. Int J Mol Sci 21:1445     Reference: February 21st, 2020
Gene Product: September 1st, 2003
Variation: March 18th, 2015
Gene Model: March 18th, 2015
42 days agonnr2 nitrate reductase2: partial cDNA from seedling root cDNA similar to nitrate reductase
5.07
GRMZM5G878558
Du, HY et al. 2020. Int J Mol Sci 21:1445     Reference: February 21st, 2020
Gene Product: September 1st, 2003
Variation: October 26th, 2010
Gene Model: May 10th, 2018
42 days agonnr1 nitrate reductase(NADH)1: leaf, scutellum cDNA's; flavin and cyt b domains functional in E. coli, may be allelic to nnr3
4.05
   Du, HY et al. 2020. Int J Mol Sci 21:1445     Reference: February 21st, 2020
Gene Product: September 1st, 2003
Variation: October 26th, 2010
42 days agohb1 hemoglobin1: suppression of expression associated with programmed cell death (Huang et al 2014)cDNA sequence; SSR umc1733;cloned hb gene codes for a predicted protein of 164 amino acids
9.06
GRMZM2G067402
Du, HY et al. 2020. Int J Mol Sci 21:1445     Reference: February 21st, 2020
Gene Product: February 20th, 2018
Variation: September 24th, 2010
Gene Model: May 15th, 2014
42 days agobx3 benzoxazinone synthesis3: endoplasmic reticulum monoxygenase; synthesis of cyclic hydroxamates/DIMBOA; insect resistance in young seedlings; SSR umc1017
4.01
GRMZM2G167549
Schneider, HM et al. 2020. J Exp Bot pp.doi: 10.1093/jxb/eraa084     Reference: February 21st, 2020
Gene Product: October 19th, 2011
Variation: November 12th, 2013
Gene Model: October 24th, 2011
42 days agogln1 glutamine synthetase1: chloroplast, gene specific cDNA probe, GS2 isoform; 6-member nuclear gene family
10.07
   Du, HY et al. 2020. Int J Mol Sci 21:1445     Reference: February 21st, 2020
Gene Product: September 1st, 2003
Variation: September 1st, 2003
42 days agonii2 nitrite reductase2: cDNA homologous to spinach gene, induced by nitrate, putative chloroplast transit peptide, two copies
4.07
GRMZM2G079381
Du, HY et al. 2020. Int J Mol Sci 21:1445     Reference: February 21st, 2020
Gene Product: September 1st, 2003
Variation: September 1st, 2003
Gene Model: September 10th, 2014
42 days agofnr1 ferredoxin NADP reductase1: single or low copy; root, nitrate induced cDNA; deduced amino acid sequence >90% similar to rice FNR; produces an active FNR product in E. coli
1.11
   Du, HY et al. 2020. Int J Mol Sci 21:1445     Reference: February 21st, 2020
Gene Product: September 1st, 2003
Variation: December 7th, 2012
42 days agoAY109534  : similar to Arabidopsis phosphoglycerate/bisphosphoglycerate mutase
4.08
   Du, HY et al. 2020. Int J Mol Sci 21:1445     Reference: February 21st, 2020
Variation: September 25th, 2007
42 days agofdx6 ferredoxin6:
 
GRMZM2G106190
Du, HY et al. 2020. Int J Mol Sci 21:1445     Reference: February 21st, 2020
Gene Product: September 1st, 2003
Variation: November 18th, 2011
Gene Model: July 27th, 2016
42 days agobx11 benzoxazinone synthesis11:
 
GRMZM2G336824
Schneider, HM et al. 2020. J Exp Bot pp.doi: 10.1093/jxb/eraa084     Reference: February 21st, 2020
Gene Product: July 8th, 2013
Gene Model: July 8th, 2013
42 days agonnr4 nitrate reductase4:
 
GRMZM2G076723
Du, HY et al. 2020. Int J Mol Sci 21:1445     Reference: February 21st, 2020
Gene Product: September 1st, 2003
Gene Model: May 10th, 2018
42 days agonii1 nitrate reductase1:
 
GRMZM2G102959
Du, HY et al. 2020. Int J Mol Sci 21:1445     Reference: February 21st, 2020
Gene Product: September 1st, 2003
Gene Model: May 10th, 2018
42 days agonrt5 nitrate transport5:
 
GRMZM2G455124
Du, HY et al. 2020. Int J Mol Sci 21:1445     Reference: February 21st, 2020
Gene Product: September 1st, 2003
Gene Model: May 21st, 2019
42 days agotk1 transketolase 1:
9.03
GRMZM2G033208
Du, HY et al. 2020. Int J Mol Sci 21:1445     Reference: February 21st, 2020
Gene Product: March 11th, 2008
Variation: January 29th, 2011
Gene Model: December 21st, 2015
42 days agopgd4 phosphogluconate dehydrogenase4:
10.04
GRMZM2G177077
Du, HY et al. 2020. Int J Mol Sci 21:1445     Reference: February 21st, 2020
Gene Product: September 1st, 2003
Gene Model: September 22nd, 2018
43 days agoumc1279  :
9.00
GRMZM2G000623
    Variation: September 1st, 2003
Gene Model: February 20th, 2020
43 days agolhy1 late hypocotyl elongation protein ortholog1: myb transcription factor - core clock gene (Hayes et al. 2010)
10.03
GRMZM2G474769
Shi, Y et al. 2020. Frontiers Plant Sci pp.doi: 10.3389/fpls.2020.00078     Reference: February 20th, 2020
Gene Product: July 31st, 2016
Variation: December 28th, 2016
Gene Model: December 28th, 2016
43 days agocca1 circadian clock associated1: myb transcription factor - clock gene
 
GRMZM2G014902
Shi, Y et al. 2020. Frontiers Plant Sci pp.doi: 10.3389/fpls.2020.00078     Reference: February 20th, 2020
Gene Product: July 31st, 2016
Variation: March 18th, 2011
Gene Model: July 30th, 2016
47 days agomagi2594  :
1.11
GRMZM2G352415
    Variation: April 24th, 2006
Gene Model: February 16th, 2020
48 days agona1 nana plant1: short, erect dwarf; no response to gibberellins
3.06 - 3.08
GRMZM2G449033
Castorina, G; Consonni, G. 2020. Int J Mol Sci 21:E1191     Reference: February 15th, 2020
Gene Product: July 24th, 2012
Variation: December 22nd, 2016
Gene Model: December 20th, 2011
48 days agona2 nana plant2: like na1
5.03
GRMZM2G057000
Castorina, G; Consonni, G. 2020. Int J Mol Sci 21:E1191   AT3G19820 (TAIR) Reference: February 15th, 2020
Gene Product: June 13th, 2016
Variation: June 13th, 2016
Gene Model: June 13th, 2016
48 days agoumc1204  :
 
GRMZM2G164088
    Variation: September 1st, 2003
Gene Model: February 15th, 2020
48 days agobrs1 brassinosteroid synthesis1:
1.03
GRMZM2G065635
Castorina, G; Consonni, G. 2020. Int J Mol Sci 21:E1191   AT3G50660 (TAIR) Reference: February 15th, 2020
Gene Product: September 20th, 2010
Variation: November 7th, 2013
Gene Model: October 3rd, 2012
48 days agobrd1 brassinosteroid-deficient dwarf1: Mutant plants have essentially no internode elongation and exhibit no etiolation response when germinated in the dark.
 
GRMZM2G103773
Castorina, G; Consonni, G. 2020. Int J Mol Sci 21:E1191     Reference: February 15th, 2020
Gene Product: February 18th, 2012
Variation: August 16th, 2019
Gene Model: February 15th, 2012
48 days agoptpn1 protein tyrosine phosphatase-like nulceotidase1: encodes proten with nucleotidase activity; is activated by ABA signaling and is a key regulator of drought-promoted vitamin C production
 
GRMZM2G146819
Zhang, H et al. 2020. Molecular Plant pp.doi: 10.1016/j.molp.2020.02.005   AT3G62010 (TAIR) Reference: February 15th, 2020
Gene Product: February 15th, 2020
Gene Model: February 15th, 2020
48 days agoIDP3798  :
1.09
GRMZM2G075974
    Variation: March 31st, 2005
Gene Model: February 15th, 2020
49 days agoIDP3803  :
1.09
GRMZM2G003640
    Variation: March 31st, 2005
Gene Model: February 14th, 2020
50 days agoacc2 acetyl-CoA carboxylase2: graminicide (e.g., sethoxydim, haloxyfop) resistance; encodes acetyl-CoA carboxylase
2.04
GRMZM5G858094
Liu, X et al. 2020. bioRxiv preprint pp.doi: 10.1101/2020.02.11.943787     Reference: February 13th, 2020
Gene Product: September 1st, 2003
Variation: July 7th, 2012
Gene Model: July 7th, 2012
50 days agoad1 adherent1: seedling leaves, tassel branches, and occasionally top leaves adhere
1.08
GRMZM2G167438
Liu, X et al. 2020. bioRxiv preprint pp.doi: 10.1101/2020.02.11.943787     Reference: February 13th, 2020
Gene Product: November 1st, 2018
Variation: February 13th, 2020
Gene Model: February 13th, 2020
50 days agogl1 glossy1: cuticle wax altered; leaf surface bright, water adheres
7.02
   Liu, X et al. 2020. bioRxiv preprint pp.doi: 10.1101/2020.02.11.943787     Reference: February 13th, 2020
Gene Product: September 1st, 2003
Variation: October 26th, 2006
50 days agogl8 glossy8: (was gl10) like gl1; cuticle wax in rice-grain-type particles; cDNA probesimilar to Arabidopsis beta-ketoacyl reductase 1
5.05
   Liu, X et al. 2020. bioRxiv preprint pp.doi: 10.1101/2020.02.11.943787     Reference: February 13th, 2020
Gene Product: September 1st, 2003
Variation: June 14th, 2012
50 days agokcs15 3-ketoacyl-CoA synthase15: NCBI: fatty acid elongase
1.08
GRMZM2G162508
Liu, X et al. 2020. bioRxiv preprint pp.doi: 10.1101/2020.02.11.943787     Reference: February 13th, 2020
Gene Product: November 1st, 2018
Variation: November 4th, 2016
Gene Model: November 4th, 2016
50 days agoltpg1 glycosylphosphatidylinositol-anchored lipid protein transfer1: NCBI: putative bifunctional inhibitor/LTP/seed storage protein family
1.06
GRMZM2G083725
Liu, X et al. 2020. bioRxiv preprint pp.doi: 10.1101/2020.02.11.943787     Reference: February 13th, 2020
Gene Product: September 1st, 2003
Variation: December 2nd, 2016
Gene Model: December 2nd, 2016
50 days agokcs19 3-ketoacyl-CoA synthase19:
 
GRMZM2G062718
Liu, X et al. 2020. bioRxiv preprint pp.doi: 10.1101/2020.02.11.943787     Reference: February 13th, 2020
Gene Product: November 1st, 2018
Gene Model: February 13th, 2020
50 days agokcs3 3-ketoacyl-CoA synthase3:
 
GRMZM2G075140
Liu, X et al. 2020. bioRxiv preprint pp.doi: 10.1101/2020.02.11.943787     Reference: February 13th, 2020
Gene Product: November 1st, 2018
Gene Model: February 13th, 2020
50 days agokcs9 3-ketoacyl-CoA synthase9:
 
GRMZM2G104626
Liu, X et al. 2020. bioRxiv preprint pp.doi: 10.1101/2020.02.11.943787     Reference: February 13th, 2020
Gene Product: November 1st, 2018
Gene Model: February 13th, 2020
50 days agokcs11 3-ketoacyl-CoA synthase11:
 
GRMZM2G149636
Liu, X et al. 2020. bioRxiv preprint pp.doi: 10.1101/2020.02.11.943787     Reference: February 13th, 2020
Gene Product: November 1st, 2018
Gene Model: February 13th, 2020
50 days agokcs18 3-ketoacyl-CoA synthase18:
 
GRMZM2G156620
Liu, X et al. 2020. bioRxiv preprint pp.doi: 10.1101/2020.02.11.943787     Reference: February 13th, 2020
Gene Product: November 1st, 2018
Gene Model: February 13th, 2020
50 days agokcs16 3-ketoacyl-CoA synthase16:
 
GRMZM2G160417
Liu, X et al. 2020. bioRxiv preprint pp.doi: 10.1101/2020.02.11.943787     Reference: February 13th, 2020
Gene Product: November 1st, 2018
Gene Model: February 13th, 2020
50 days agokcs28 3-ketoacyl-CoA synthase28:
 
GRMZM2G164974
Liu, X et al. 2020. bioRxiv preprint pp.doi: 10.1101/2020.02.11.943787     Reference: February 13th, 2020
Gene Product: November 1st, 2018
Gene Model: February 13th, 2020
50 days agokcs22 3-ketoacyl-CoA synthase22:
 
GRMZM2G168956
Liu, X et al. 2020. bioRxiv preprint pp.doi: 10.1101/2020.02.11.943787     Reference: February 13th, 2020
Gene Product: November 1st, 2018
Gene Model: February 13th, 2020
50 days agokcs24 3-ketoacyl-CoA synthase24:
 
GRMZM5G894016
Liu, X et al. 2020. bioRxiv preprint pp.doi: 10.1101/2020.02.11.943787     Reference: February 13th, 2020
Gene Product: November 1st, 2018
Gene Model: February 13th, 2020
50 days agocer1 eceriferum1:
 
GRMZM2G075255
Liu, X et al. 2020. bioRxiv preprint pp.doi: 10.1101/2020.02.11.943787     Reference: February 13th, 2020
Gene Product: February 13th, 2020
Gene Model: February 13th, 2020
50 days agocer2 eceriferum2:
 
GRMZM2G029912
Liu, X et al. 2020. bioRxiv preprint pp.doi: 10.1101/2020.02.11.943787     Reference: February 13th, 2020
Gene Product: February 13th, 2020
Gene Model: February 13th, 2020
50 days agolacs2 long chain acyl-CoA synthetase2:
 
GRMZM2G104847
Liu, X et al. 2020. bioRxiv preprint pp.doi: 10.1101/2020.02.11.943787     Reference: February 13th, 2020
Gene Product: October 31st, 2018
Gene Model: February 13th, 2020
50 days agowsd1 wax ester synthase/diacylglycerol acyltransferase1:
 
GRMZM2G077375
Liu, X et al. 2020. bioRxiv preprint pp.doi: 10.1101/2020.02.11.943787     Reference: February 13th, 2020
Gene Product: July 23rd, 2018
Gene Model: February 13th, 2020
51 days agorpd3 RPD3 histone deacetylase homolog: cDNA complements yeast rpd3, multiple copy, SSR umc1173.
4.09
GRMZM2G172883
Zhang, K et al. 2020. PeerJ DOI: 10.7717/peerj.8539     Reference: February 12th, 2020
Gene Product: February 12th, 2020
Variation: November 11th, 2014
Gene Model: November 6th, 2014
51 days agohdac9 histone deacetylase9:
 
GRMZM2G057044
Zhang, K et al. 2020. PeerJ DOI: 10.7717/peerj.8539     Reference: February 12th, 2020
Gene Product: February 12th, 2020
Variation: September 1st, 2003
Gene Model: February 12th, 2020
51 days agohdt104 histone deacetylase 104:
 
GRMZM5G898314
Zhang, K et al. 2020. PeerJ DOI: 10.7717/peerj.8539     Reference: February 12th, 2020
Gene Product: February 12th, 2020
Gene Model: October 12th, 2017
51 days agohda102 histone deacetylase:
2.04
GRMZM2G119703
Zhang, K et al. 2020. PeerJ DOI: 10.7717/peerj.8539     Reference: February 12th, 2020
Gene Product: February 12th, 2020
Variation: May 28th, 2011
Gene Model: November 6th, 2014
51 days agohda108 histone deacetylase: mutant plants exhibit many developmental defects: significant reduction in plant height, alterations of shoot and leaf development, alterations of inflorescence patterning and fertility
4.05
   Zhang, K et al. 2020. PeerJ DOI: 10.7717/peerj.8539     Reference: February 12th, 2020
Gene Product: September 1st, 2003
Variation: February 1st, 2018
51 days agohda109 histone deacetylase:
2.08
GRMZM2G457889
Zhang, K et al. 2020. PeerJ DOI: 10.7717/peerj.8539     Reference: February 12th, 2020
Gene Product: February 12th, 2020
Variation: November 11th, 2014
Gene Model: November 11th, 2014
51 days agohda110 histone deacetylase:
7.01
GRMZM2G107309
Zhang, K et al. 2020. PeerJ DOI: 10.7717/peerj.8539     Reference: February 12th, 2020
Gene Product: February 12th, 2020
Variation: September 1st, 2003
Gene Model: November 6th, 2014
51 days agohdt102 histone deacetylase102:
8.05
GRMZM2G100146
Zhang, K et al. 2020. PeerJ DOI: 10.7717/peerj.8539     Reference: February 12th, 2020
Gene Product: February 12th, 2020
Variation: November 25th, 2008
Gene Model: July 27th, 2016
51 days agohdt103 histone deacetylase103:
6.07
GRMZM2G159032
Zhang, K et al. 2020. PeerJ DOI: 10.7717/peerj.8539     Reference: February 12th, 2020
Gene Product: February 12th, 2020
Variation: November 25th, 2008
Gene Model: July 27th, 2016
51 days agohdac1 histone deacetylase1:
 
GRMZM2G163572
Zhang, K et al. 2020. PeerJ DOI: 10.7717/peerj.8539     Reference: February 12th, 2020
Gene Product: February 12th, 2020
Gene Model: February 12th, 2020
51 days agohdac3 histone deacetylase3:
 
GRMZM2G367886
Zhang, K et al. 2020. PeerJ DOI: 10.7717/peerj.8539     Reference: February 12th, 2020
Gene Product: February 12th, 2020
Gene Model: February 12th, 2020
51 days agohdac4 histone deacetylase4:
 
GRMZM2G456473
Zhang, K et al. 2020. PeerJ DOI: 10.7717/peerj.8539     Reference: February 12th, 2020
Gene Product: February 12th, 2020
Gene Model: February 12th, 2020
51 days agohdac5 histone deacetylase5:
 
GRMZM2G056539
Zhang, K et al. 2020. PeerJ DOI: 10.7717/peerj.8539     Reference: February 12th, 2020
Gene Product: February 12th, 2020
Gene Model: February 12th, 2020
51 days agohdac7 histone deacetylase7:
 
GRMZM2G008425
Zhang, K et al. 2020. PeerJ DOI: 10.7717/peerj.8539     Reference: February 12th, 2020
Gene Product: February 12th, 2020
Gene Model: February 12th, 2020
51 days agohdac8 histone deacetylase8:
 
GRMZM5G807054
Zhang, K et al. 2020. PeerJ DOI: 10.7717/peerj.8539     Reference: February 12th, 2020
Gene Product: February 12th, 2020
Gene Model: February 12th, 2020
51 days agohdac2 histone deacetylase2:
9.03
GRMZM2G081474
Zhang, K et al. 2020. PeerJ DOI: 10.7717/peerj.8539     Reference: February 12th, 2020
Gene Product: February 12th, 2020
Gene Model: February 12th, 2020
51 days agosrt101 sirtuin 101:
10.04
GRMZM2G058573
Zhang, K et al. 2020. PeerJ DOI: 10.7717/peerj.8539     Reference: February 12th, 2020
Gene Product: February 12th, 2020
Variation: February 12th, 2020
Gene Model: February 12th, 2020
51 days agohdac6 histone deacetylase6:
8.03
GRMZM2G046824
Zhang, K et al. 2020. PeerJ DOI: 10.7717/peerj.8539     Reference: February 12th, 2020
Gene Product: February 12th, 2020
Gene Model: February 12th, 2020
52 days agouaz7c01c01  :
 
GRMZM2G158462
    Variation: September 1st, 2003
Gene Model: February 11th, 2020
52 days agopan1 pangloss1: Defines polarization in divisions of subsidiary mother cells at guard cells
 
GRMZM5G836190
Zhang, XY et al. 2020. BMC Plant Biology 20:67     Reference: February 11th, 2020
Gene Product: November 27th, 2012
Variation: July 11th, 2014
Gene Model: November 2nd, 2011
52 days agogpc4 glyceraldehyde-3-phosphate dehydrogenase4: C subunit, electrophoretic mobility, coding sequence homology to gpc3, unique 3' untranslated region
5.05
GRMZM2G176307
Zhang, XY et al. 2020. BMC Plant Biology 20:67     Reference: February 11th, 2020
Gene Product: September 1st, 2003
Variation: December 13th, 2012
Gene Model: August 12th, 2014
52 days agojmj10 JUMONJI-transcription factor 10: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Zhang, XY et al. 2020. BMC Plant Biology 20:67     Reference: February 11th, 2020
Gene Product: April 3rd, 2019
52 days agoomt2 Caffeoyl CoA O-methyltransferase2:
9.02
GRMZM2G099363
Zhang, XY et al. 2020. BMC Plant Biology 20:67     Reference: February 11th, 2020
Gene Product: January 5th, 2014
Variation: May 13th, 2016
Gene Model: September 17th, 2014
52 days agohtn1 Helminthosporium turcicum resistanceN1: formerly HtN; dominant Htn1 plants resistant to Exserohilum turcicum
8.06
GRMZM2G164612
Zhang, XY et al. 2020. BMC Plant Biology 20:67   At1g66980 (TAIR)
LOC_Os01g49580 (MSU/TIGR)
Reference: February 11th, 2020
Gene Product: July 10th, 2019
Variation: July 14th, 2015
Gene Model: July 1st, 2015
52 days agogst23 glutathione transferase23: cDNA, SSR umc2098
7.02
GRMZM2G416632
Zhang, XY et al. 2020. BMC Plant Biology 20:67     Reference: February 11th, 2020
Gene Product: September 1st, 2003
Variation: August 20th, 2010
Gene Model: July 27th, 2016
52 days agoumc2234  :
1.06
GRMZM2G441903
Zhang, XY et al. 2020. BMC Plant Biology 20:67     Reference: February 11th, 2020
Variation: January 18th, 2017
Gene Model: January 18th, 2017
52 days agopmei3 pectin methylesterase inhibitor3:
6.05
   Zhang, XY et al. 2020. BMC Plant Biology 20:67     Reference: February 11th, 2020
Gene Product: January 8th, 2019
Variation: September 25th, 2007
52 days agofrk1 fructokinase1:
3.05
GRMZM2G086845
Zhang, XY et al. 2020. BMC Plant Biology 20:67     Reference: February 11th, 2020
Variation: May 1st, 2010
Gene Model: July 27th, 2016
52 days agoremo1 remorin1:
 
GRMZM2G107774
Zhang, XY et al. 2020. BMC Plant Biology 20:67     Reference: February 11th, 2020
Gene Product: September 24th, 2018
Variation: February 6th, 2016
Gene Model: February 6th, 2016
52 days agompk6 MAP kinase6:
10.03
GRMZM2G089484
Zhang, XY et al. 2020. BMC Plant Biology 20:67     Reference: February 11th, 2020
Gene Product: July 12th, 2013
Variation: January 19th, 2013
Gene Model: July 9th, 2013
52 days agoIDP707  :
1.08
GRMZM2G164018
Zhang, XY et al. 2020. BMC Plant Biology 20:67     Reference: February 11th, 2020
Variation: March 31st, 2005
Gene Model: February 14th, 2019
53 days agoxt1 beta-1,2-xylosyltransferase1:
 
GRMZM2G419267
Bondili, JS et al. 2006. Phytochemistry 67:2215-2224     Reference: February 10th, 2020
Gene Product: February 10th, 2020
Gene Model: February 10th, 2020
53 days agofuct1 alpha 1,3-fucosyltransferase:
 
GRMZM2G103939
Bondili, JS et al. 2006. Phytochemistry 67:2215-2224     Reference: February 10th, 2020
Gene Product: February 10th, 2020
Gene Model: February 10th, 2020
54 days agopco066796  :
1.06
GRMZM2G093755
    Variation: September 25th, 2007
Gene Model: February 9th, 2020
57 days agocko2 cytokinin oxidase 2:
3.05
GRMZM2G050997
Wang, YF et al. 2020. New Phytol pp.doi: 10.1111/nph.16472     Reference: February 6th, 2020
Gene Product: April 4th, 2014
Variation: February 26th, 2008
Gene Model: March 21st, 2014
Recommended by Ed Coe:
January 8th, 2008
57 days agocap1 calcium pump1: anoxic root cDNA, low or single copy, complements yeast mutants defective in Ca++-pumps
8.05
   Wang, YF et al. 2020. New Phytol pp.doi: 10.1111/nph.16472     Reference: February 6th, 2020
Gene Product: May 20th, 2015
Variation: September 1st, 2003
57 days agobif1 barren inflorescence1: dominant Bif1 plants have ear and tassel with many fewer spikelets, bare rachis appendages
8.03 - 8.03
GRMZM2G130953
Wang, YF et al. 2020. New Phytol pp.doi: 10.1111/nph.16472     Reference: February 6th, 2020
Gene Product: October 16th, 2015
Variation: October 16th, 2015
Gene Model: October 16th, 2015
57 days agodhn6 dehydrin6:
3.07
GRMZM2G031308
Zhang, X et al. 2020. Elife 9:e51918   AT4G23630 (TAIR) Reference: February 6th, 2020
Gene Product: August 5th, 2017
Variation: February 9th, 2014
Gene Model: July 27th, 2016
57 days agodhn7 dehydrin7:
 
GRMZM2G002786
Zhang, X et al. 2020. Elife 9:e51918   AT4G23630 (TAIR) Reference: February 6th, 2020
Gene Product: August 5th, 2017
Variation: February 9th, 2014
Gene Model: July 27th, 2016
57 days agopsrp1 plastid specific ribosomal protein1 : chloroplast-localized cyanobacterial ribosome hibernation factor LrtA homolog
 
GRMZM2G347956
Swift, K et al. 2020. Plants 9:209   AT5G24490 (TAIR) Reference: February 6th, 2020
Gene Product: February 6th, 2020
Variation: February 6th, 2020
Gene Model: February 6th, 2020
59 days agocl244_1  :
1.02
GRMZM2G093125
    Variation: September 25th, 2007
Gene Model: February 4th, 2020
60 days agopcr3 protochlorophyllide reductase3: localized in chloroplast; overexpression increased tocopherol content in leaves and kernels (Zhan et al., 2019)
 
GRMZM2G073351
Das, AK et al. 2020. J Food Composition and Analysis doi: 10.1016/j.jfca.2020.103446     Reference: February 3rd, 2020
Gene Product: June 8th, 2019
Variation: June 8th, 2019
Gene Model: October 4th, 2017
60 days agodogt1 deoxynivalenol-glucosyltransferase1:
 
GRMZM2G403740
Guo, J et al. 2020. Plant Sci 292:110380     Reference: February 3rd, 2020
Gene Product: May 23rd, 2019
Gene Model: May 20th, 2019
60 days agoIDP2455  : similar to bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin-like protein of A. thaliana
2.04
GRMZM2G136364
Guo, J et al. 2020. Plant Sci 292:110380     Reference: February 3rd, 2020
Variation: March 31st, 2005
Gene Model: February 19th, 2019
60 days agoIDP65  : similar to 60S ribosomal protein L23 of A. thaliana
9.07
GRMZM2G150058
    Variation: March 31st, 2005
Gene Model: February 3rd, 2020
61 days agocsu738  :
1.01 - 1.01
GRMZM2G109725
    Variation: September 1st, 2003
Gene Model: February 2nd, 2020
62 days agotls1 tasselless1: encodes an aquaporin; plants generally lack tassels, have ear shoots but ear development is variable ranging from no seed set to a few kernels on a small ball-shaped cob; in some backgrounds, pubescent, leathery at 4-8 leaf stage; similar to bs1 of Woodworth and Micu. Phenotypes corrected by boron spraying (Leonard et al 2014).
1.11 - 1.12
GRMZM2G176209
Housh, AB et al. 2020. Int J Mol Sci 21:976     Reference: February 1st, 2020
Gene Product: April 3rd, 2014
Variation: July 29th, 2014
Gene Model: April 2nd, 2014
62 days agorte1 rotten ear1: mutants show distinct defects in vegetative and reproductive development, eventually causing widespread sterility in its tassel and ear.
1.05
GRMZM2G166159
Housh, AB et al. 2020. Int J Mol Sci 21:976     Reference: February 1st, 2020
Gene Product: June 24th, 2017
Variation: July 21st, 2014
Gene Model: July 19th, 2014
62 days agorte2 rotten ear2: mutants strongly enhance the phenotype of rte1 mutants in soils with low boron content, producing shorter plants that fail to form all reproductive structures
 
GRMZM2G082203
Housh, AB et al. 2020. Int J Mol Sci 21:976     Reference: February 1st, 2020
Gene Product: June 24th, 2017
Variation: June 24th, 2017
Gene Model: June 24th, 2017
63 days agocg1 corngrass1: semidominant Cg1 plants have narrow leaves, extreme tilleringCg1 encodes two tandem miR156 genes that are overexpressed in the meristem and lateral organs. George Chuck, 2007
3.02
GRMZM2G022489
Kang, T et al. 2020. Frontiers Plant Sci 10:1664     Reference: January 31st, 2020
Gene Product: June 17th, 2016
Variation: August 25th, 2011
Gene Model: April 5th, 2013
Recommended by George Chuck:
September 25th, 2007
63 days agolyce1 lycopene epsilon cyclase1: determines qualitative composition of endosperm carotenoids
8.05
GRMZM2G012966
Liu, JX et al. 2020. IEEE Access 8:5223 - 15231     Reference: January 31st, 2020
Gene Product: December 10th, 2011
Variation: October 3rd, 2011
Gene Model: October 3rd, 2011
63 days agohyd3 hydroxylase3: beta-carotene hydroxylase
 
GRMZM2G152135
Liu, JX et al. 2020. IEEE Access 8:5223 - 15231     Reference: January 31st, 2020
Gene Product: December 13th, 2011
Variation: September 3rd, 2011
Gene Model: April 9th, 2013
63 days agocrti1 carotene isomerase1: enclodes carotene isomerase1
 
GRMZM2G108457
Liu, JX et al. 2020. IEEE Access 8:5223 - 15231     Reference: January 31st, 2020
Gene Product: December 10th, 2011
Gene Model: April 8th, 2013
64 days agosmc3 structural maintenance of chromosomes3: participates in meiotic centromere pairing
 
GRMZM2G456570
Zhang, J et al. 2020. Plant Cell pp.doi: 10.1105/tpc.19.00834     Reference: January 30th, 2020
Gene Product: December 10th, 2019
Variation: January 30th, 2020
Gene Model: January 30th, 2020
65 days agop1 pericarp color1: dominant P1 regulates red pigment (phlobaphenes) in cob and pericarp (ex. P1-wr red cob; P1-rr red pericarp and cob) and in tassel glumes and husks; tissue-specific allele variations; SSR phi095; myb homologue
1.03
   Landoni, M et al. 2020. Sci. Rep. 10:1417     Reference: January 29th, 2020
Gene Product: October 13th, 2010
Variation: May 3rd, 2016
65 days agocenH3 centromeric histone H3:
6.06
GRMZM2G158526
Liu, Y et al. 2020. PLoS Biol pp.doi: 10.1371/journal.pbio.3000582     Reference: January 29th, 2020
Gene Product: December 24th, 2015
Variation: November 7th, 2012
Gene Model: October 24th, 2011
66 days agogbp2 GTP binding protein2: cDNA sequence similar animal G protein beta-subunits; single copy
1.09
GRMZM2G045314
Wu, QY, et al. 2019. Proc Natl Acad Sci, USA. 0:doi: 10.1073/pnas.1917577116     Reference: January 28th, 2020
Gene Product: May 1st, 2018
Variation: December 19th, 2019
Gene Model: July 27th, 2016
66 days agoibh1 increased leaf inclination1-binding bhlh 1:
 
GRMZM2G388823
Cao, YY et al. 2020. J Exp Bot pp.doi: 10.1093/jxb/eraa052   AT2G43060 (TAIR) Reference: January 28th, 2020
Gene Product: September 14th, 2016
Variation: January 28th, 2020
Gene Model: January 28th, 2020
66 days agoibh2 increased leaf inclination1-binding bhlh 2: one of the two genes orthologous to OsIBH1 and AtIBH1 (see also ibh1)
10.07
GRMZM2G084576
Cao, YY et al. 2020. J Exp Bot pp.doi: 10.1093/jxb/eraa052   AT2G43060 (TAIR) Reference: January 28th, 2020
Gene Product: September 14th, 2016
Gene Model: December 20th, 2017
67 days agopor2 porin2: cDNA similar to plant tonoplast aquaporins; SSR umc1061
10.06
GRMZM2G125023
Quiroga, G et al. 2020. Plants 9:E148     Reference: January 27th, 2020
Gene Product: September 1st, 2003
Variation: January 29th, 2011
Gene Model: February 5th, 2015
67 days agoumc1336  :
10.03
GRMZM2G061135
    Gene Product: January 27th, 2020
Variation: September 1st, 2003
Gene Model: December 12th, 2017
67 days agoohp1 opaque2 heterodimerizing protein1: o2 heterodimerizing protein; one of two loci
1.11
   Chotewutmontri, P et al. 2020. Plants 9:152     Reference: January 27th, 2020
Gene Product: September 1st, 2003
Variation: February 2nd, 2015
67 days agoohp2 opaque2 heterodimerizing protein2: cDNA sequence, SSRs nc007, phi024
5.01
   Chotewutmontri, P et al. 2020. Plants 9:152     Reference: January 27th, 2020
Gene Product: September 1st, 2003
Variation: April 25th, 2015
67 days agotip1 tonoplast intrinsic protein1: tip1 cDNA is 1097 bp long, including the 93 bp leader sequence. Its derived amino acid sequence has 76% identity with the tonoplast aquaporin from Arabidopsis.
10.04
GRMZM2G168439
Quiroga, G et al. 2020. Plants 9:E148     Reference: January 27th, 2020
Gene Product: September 1st, 2003
Variation: September 1st, 2003
Gene Model: February 5th, 2015
67 days agopip1a plasma membrane intrinsic protein1:
2.03
GRMZM2G174807
Quiroga, G et al. 2020. Plants 9:E148     Reference: January 27th, 2020
Gene Product: September 1st, 2003
Variation: June 6th, 2005
Gene Model: October 29th, 2014
67 days agopip1d plasma membrane intrinsic protein1: differs in nucleotide sequence from pip1c but encodes the same protein.
4.06
GRMZM2G392975
Quiroga, G et al. 2020. Plants 9:E148     Reference: January 27th, 2020
Gene Product: September 1st, 2003
Variation: October 29th, 2014
Gene Model: October 29th, 2014
67 days agopip2d plasma membrane intrinsic protein2: member of the aquaporin family
5.05
   Quiroga, G et al. 2020. Plants 9:E148     Reference: January 27th, 2020
Gene Product: September 1st, 2003
Variation: March 7th, 2007
67 days agotip4a tonoplast intrinsic protein4:
6.05
GRMZM2G103945
Quiroga, G et al. 2020. Plants 9:E148     Reference: January 27th, 2020
Gene Product: September 1st, 2003
Variation: July 10th, 2015
Gene Model: February 5th, 2015
67 days agotip5 tonoplast intrinsic protein5: cDNA sequence similar to tonoplast aquaporin; SSR umc2122
10.06
GRMZM2G125023
Quiroga, G et al. 2020. Plants 9:E148     Reference: January 27th, 2020
Gene Product: September 1st, 2003
Variation: September 1st, 2003
Gene Model: February 5th, 2015
67 days agonip2a NOD26-like membrane intrinsic protein2:
5.07
GRMZM2G028325
Quiroga, G et al. 2020. Plants 9:E148     Reference: January 27th, 2020
Gene Product: September 1st, 2003
Variation: May 28th, 2013
Gene Model: June 3rd, 2015
67 days agopsb1 photosystem II1: (was hcf134) lacks PSII core complex; pale seedling; mutable (Mu-induced)Ortholog of Arabidopsis HCF136. Photosystem II assembly factor. (A. Barkan, 2015)
6.01 - 6.08
GRMZM2G102838
Chotewutmontri, P et al. 2020. Plants 9:152     Reference: January 27th, 2020
Variation: July 8th, 2015
Gene Model: February 17th, 2015
67 days agoacco35 1-aminocyclopropane-1-carboxylate oxidase35:
5.07
GRMZM2G052422
Shen, S et al. 2020. Plant Cell Environ pp.doi: 10.1111/pce.13704     Reference: January 27th, 2020
Gene Product: May 16th, 2016
Variation: May 19th, 2015
Gene Model: May 19th, 2015
67 days agotrpp1 trehalose-6-phosphate phosphatase1: similar to haloacid dehalogenase-like hydrolase domain-containing protein of A. thaliana
 
GRMZM2G347280
Shen, S et al. 2020. Plant Cell Environ pp.doi: 10.1111/pce.13704     Reference: January 27th, 2020
Gene Product: September 15th, 2013
Gene Model: September 15th, 2013
67 days agosams1 S-adenosylmethionine synthetase1:
 
GRMZM2G117198
Shen, S et al. 2020. Plant Cell Environ pp.doi: 10.1111/pce.13704     Reference: January 27th, 2020
Gene Product: January 27th, 2020
Gene Model: January 27th, 2020
67 days agohcf244 high chlorophyll fluorescence244: forms complex with OHP1 and OHP2 in photosystem II assembly
 
GRMZM2G143917
Chotewutmontri, P et al. 2020. Plants 9:152   AT4G35250 (TAIR) Reference: January 27th, 2020
Variation: January 27th, 2020
Gene Model: January 27th, 2020
67 days agosams2 S-adenosylmethionine synthetase2:
8.03
GRMZM2G054123
    Gene Product: January 27th, 2020
Gene Model: January 27th, 2020
67 days agoivr2 invertase2: genomic and cDNA for soluble invertase, single band on Southerns, upregulated by increased carbohydrate levels
5.03
   Shen, S et al. 2020. Plant Cell Environ pp.doi: 10.1111/pce.13704     Reference: January 27th, 2020
Gene Product: June 12th, 2018
Variation: May 18th, 2012
69 days agopebp12 phosphatidylethanolamine-binding protein12:
 
   Liu, HJ et al. 2020. Genome Biol 21:20     Reference: January 25th, 2020
Variation: December 10th, 2010
69 days agoumc1240  :
5.00
AC220970.4_FG002
    Variation: September 1st, 2003
Gene Model: January 25th, 2020
69 days agozmm15 Zea mays MADS-box 15:
5.01
GRMZM2G553379
Liu, HJ et al. 2020. Genome Biol 21:20     Reference: January 25th, 2020
Variation: June 15th, 2018
Gene Model: June 15th, 2018
69 days agopip1b plasma membrane intrinsic protein1:
5.06
   Ding, L et al. 2020. Plant Physiol pp.doi; 10.1104/pp.19.01183     Reference: January 25th, 2020
Gene Product: September 1st, 2003
Variation: April 26th, 2016
69 days agopip2a plasma membrane intrinsic protein2:
2.03
   Ding, L et al. 2020. Plant Physiol pp.doi; 10.1104/pp.19.01183     Reference: January 25th, 2020
Gene Product: September 1st, 2003
Variation: January 25th, 2020
69 days agoelfa9 elongation factor 1-alpha9: shares 89-99% nucleotide sequence identity with genes elf1a to alf1g (aka clones eEF1Aa to eEF1Ag).
9.03
GRMZM2G153541
Ding, L et al. 2020. Plant Physiol pp.doi; 10.1104/pp.19.01183     Reference: January 25th, 2020
Gene Product: September 1st, 2003
Variation: April 14th, 2014
Gene Model: April 15th, 2014
69 days agopip1e plasma membrane intrinsic protein1:
4.06
   Ding, L et al. 2020. Plant Physiol pp.doi; 10.1104/pp.19.01183     Reference: January 25th, 2020
Gene Product: September 1st, 2003
Variation: October 24th, 2014
69 days agopip1f plasma membrane intrinsic protein1:
9.01
GRMZM2G136032
Ding, L et al. 2020. Plant Physiol pp.doi; 10.1104/pp.19.01183     Reference: January 25th, 2020
Gene Product: September 1st, 2003
Variation: September 1st, 2003
Gene Model: January 25th, 2020
69 days agopip2e plasma membrane intrinsic protein2:
7.02
   Ding, L et al. 2020. Plant Physiol pp.doi; 10.1104/pp.19.01183     Reference: January 25th, 2020
Gene Product: September 1st, 2003
Variation: June 6th, 2005
69 days agopip2c plasma membrane intrinsic protein2:
4.06
   Ding, L et al. 2020. Plant Physiol pp.doi; 10.1104/pp.19.01183     Reference: January 25th, 2020
Gene Product: September 1st, 2003
Variation: March 25th, 2013
69 days agopip2f plasma membrane intrinsic protein2:
7.02
   Ding, L et al. 2020. Plant Physiol pp.doi; 10.1104/pp.19.01183     Reference: January 25th, 2020
Gene Product: September 1st, 2003
Variation: March 26th, 2013
69 days agonfc103b nucleosome/chromatin assembly factor C:
5.03
GRMZM2G320606
Liu, HJ et al. 2020. Genome Biol 21:20     Reference: January 25th, 2020
Variation: September 1st, 2003
Gene Model: December 11th, 2012
69 days agogalox1 galactose oxidase1:
 
GRMZM2G070555
Liu, HJ et al. 2020. Genome Biol 21:20     Reference: January 25th, 2020
Gene Product: January 25th, 2020
Gene Model: January 25th, 2020
69 days agobbx6 b-box6:
 
GRMZM2G422644
Liu, HJ et al. 2020. Genome Biol 21:20     Reference: January 25th, 2020
Gene Product: January 11th, 2019
Gene Model: January 10th, 2019
70 days agoamt8 ammonium transporter8: similar to Arabidopsis ammonium transporter 2
1.11
GRMZM5G883969
Ravazzolo, L et al. 2020. Int J Mol Sci 21:E686     Reference: January 24th, 2020
Gene Product: July 8th, 2013
Gene Model: October 19th, 2017
70 days agoact1 actin1: actin, one of six potential genes; genomic DNA clone; 3 introns); SSR phi115
8.03 - 8.04
   Volokhina, IV et al. 2020. Plant Gene doi: 10.1016/j.plgene.2020.100221     Reference: January 24th, 2020
Gene Product: September 1st, 2003
Variation: September 4th, 2013
70 days agohb2 hemoglobin2: suppression of expression is associated with programmed cell death (Huang et al 2014)
6.06
GRMZM2G168898
Ravazzolo, L et al. 2020. Int J Mol Sci 21:E686     Reference: January 24th, 2020
Gene Product: February 20th, 2018
Gene Model: May 15th, 2014
70 days agomet2 DNA methyl transferase2:
10.06
GRMZM2G025592
Volokhina, IV et al. 2020. Plant Gene doi: 10.1016/j.plgene.2020.100221     Reference: January 24th, 2020
Gene Product: April 6th, 2018
Variation: November 13th, 2018
Gene Model: November 16th, 2011
70 days agomet5 DNA methyl transferase5:
2.02
GRMZM2G005310
Volokhina, IV et al. 2020. Plant Gene doi: 10.1016/j.plgene.2020.100221     Reference: January 24th, 2020
Gene Product: April 6th, 2018
Variation: June 9th, 2018
Gene Model: December 22nd, 2014
70 days agomet3 DNA methyl transferase3:
9.07
   Volokhina, IV et al. 2020. Plant Gene doi: 10.1016/j.plgene.2020.100221     Reference: January 24th, 2020
Gene Product: April 6th, 2018
Variation: February 13th, 2016
70 days agochr106 chromatin complex subunit A 106: chr101/chr106 double mutant caused embryo lethality with abnormalities in cell proliferation from the early stage of kernel development.
1.10
GRMZM2G071025
Volokhina, IV et al. 2020. Plant Gene doi: 10.1016/j.plgene.2020.100221     Reference: January 24th, 2020
Variation: June 9th, 2018
Gene Model: December 22nd, 2014
70 days agonfe101 nucleosome/chromatin assembly factor group E (ACF1 homologs) 101:
5.05
GRMZM2G337749
Volokhina, IV et al. 2020. Plant Gene doi: 10.1016/j.plgene.2020.100221     Reference: January 24th, 2020
Variation: September 1st, 2003
Gene Model: August 8th, 2019
70 days agoamt1 ammonium transporter1:
 
GRMZM2G175140
Ravazzolo, L et al. 2020. Int J Mol Sci 21:E686     Reference: January 24th, 2020
Gene Product: July 8th, 2013
Gene Model: July 8th, 2013
70 days agoamt2 ammonium transporter2:
 
GRMZM2G028736
Ravazzolo, L et al. 2020. Int J Mol Sci 21:E686     Reference: January 24th, 2020
Gene Product: July 8th, 2013
Gene Model: July 8th, 2013
70 days agosweet4a sugars will eventually be exported transporter4a:
 
GRMZM2G000812
Ravazzolo, L et al. 2020. Int J Mol Sci 21:E686     Reference: January 24th, 2020
Gene Product: November 4th, 2015
Gene Model: November 3rd, 2015
70 days agonpf2 nitrate transporter/peptide transporter family2: encodes a a pH dependent non-biphasic high-affinity nitrate-specific transport protein
 
GRMZM2G161459
Ravazzolo, L et al. 2020. Int J Mol Sci 21:E686   AT1G12110 (TAIR) Reference: January 24th, 2020
Gene Product: September 1st, 2003
Variation: September 11th, 2017
Gene Model: September 11th, 2017
70 days agonpf6 nitrate transporter/peptide transporter family6:
 
GRMZM2G137421
Ravazzolo, L et al. 2020. Int J Mol Sci 21:E686     Reference: January 24th, 2020
Gene Product: September 1st, 2003
Gene Model: May 21st, 2019
70 days agoamt9 ammonium transporter9:
 
GRMZM2G043193
Ravazzolo, L et al. 2020. Int J Mol Sci 21:E686     Reference: January 24th, 2020
Gene Product: July 8th, 2013
Gene Model: May 21st, 2019
70 days agogdi1 guanosine nucleotide diphosphate dissociation inhibitor1: host susceptibility factor for Rice black-streaked dwarf virus (RBSDV); Maize rough dwarf virus (MRDV) is a different geographic strain
8.03
   Liu, QC et al. 2020. Nature communications 11:495     Reference: January 24th, 2020
Gene Product: January 24th, 2020
Variation: January 24th, 2020
75 days agocpps2 copalyl diphosphate synthase2: encodes ent-kaurene synthase, a copalyl diphosphate synthase protein having close identity with An1 gene product; likely duplicate function explains why an1 plants are not fully dwarfed (Harris et al. 2005)
1.04
GRMZM2G044481
Zhang, C et al. 2020. Plant Physiol Biochem pp.doi: 10.1016/j.plaphy.2020.01.017     Reference: January 19th, 2020
Gene Product: August 16th, 2012
Variation: January 22nd, 2018
Gene Model: September 12th, 2011
Recommended by Ed Coe:
January 8th, 2008
75 days agoga20ox1 gibberellin 20-oxidase1:
1.12
AC203966.5_FG005
Zhang, C et al. 2020. Plant Physiol Biochem pp.doi: 10.1016/j.plaphy.2020.01.017     Reference: January 19th, 2020
Gene Product: October 28th, 2014
Gene Model: October 27th, 2014
75 days agoko2 kaurene oxidase2:
 
GRMZM2G161472
Zhang, C et al. 2020. Plant Physiol Biochem pp.doi: 10.1016/j.plaphy.2020.01.017     Reference: January 19th, 2020
Gene Product: October 27th, 2014
Gene Model: October 27th, 2014
75 days agoga20ox5 gibberellin 20-oxidase5:
 
GRMZM2G049418
Zhang, C et al. 2020. Plant Physiol Biochem pp.doi: 10.1016/j.plaphy.2020.01.017     Reference: January 19th, 2020
Gene Product: October 28th, 2014
Variation: July 6th, 2017
Gene Model: October 29th, 2014
75 days agoga2ox3 gibberellin 2-oxidase3:
 
GRMZM2G022679
Zhang, C et al. 2020. Plant Physiol Biochem pp.doi: 10.1016/j.plaphy.2020.01.017     Reference: January 19th, 2020
Gene Product: October 27th, 2014
Gene Model: October 27th, 2014
75 days agoga2ox4 gibberellin 2-oxidase4:
 
GRMZM2G153359
Zhang, C et al. 2020. Plant Physiol Biochem pp.doi: 10.1016/j.plaphy.2020.01.017     Reference: January 19th, 2020
Gene Product: October 27th, 2014
Gene Model: October 27th, 2014
77 days agoIDP139  :
6.01
GRMZM2G102923
    Variation: March 31st, 2005
Gene Model: January 17th, 2020
77 days agomagi7438  :
6.01
GRMZM2G342243
    Variation: March 31st, 2005
Gene Model: January 17th, 2020
77 days agoIDP2453  :
6.02
GRMZM5G897944
    Variation: March 31st, 2005
Gene Model: January 17th, 2020
78 days agoIDP2428  :
6.02
GRMZM2G019812
    Variation: March 31st, 2005
Gene Model: January 16th, 2020
80 days agons2 narrow sheath2: embryonic transcription factor; duplicate factor with ns1; closely related to 2 other WOX3 genes, wox3a and wox3b, aka hb82, hb16 (Grassius named)
4.08
   Incognito, SJP et al. 2020. Euphytica 216:20     Reference: January 14th, 2020
Gene Product: August 25th, 2017
Variation: June 29th, 2005
80 days agod3 dwarf plant3: like d1, plant short and compact; "d2" mutation(s) are allelic (d2 is lapsed)
9.03
GRMZM2G093195
Incognito, SJP et al. 2020. Euphytica 216:20     Reference: January 14th, 2020
Gene Product: August 15th, 2012
Variation: May 19th, 2006
Gene Model: August 15th, 2012
80 days agohcf108 high chlorophyll fluorescence108: ATPase-deficient
5.01
   Incognito, SJP et al. 2020. Euphytica 216:20     Reference: January 14th, 2020
Variation: September 1st, 2003
80 days agotua3 alpha tubulin3: alpha tubulin family; mRNA expressed in all dividing cells examined; gene specific cDNA probe
5.01
AC195340.3_FG001
Incognito, SJP et al. 2020. Euphytica 216:20     Reference: January 14th, 2020
Gene Product: September 1st, 2003
Variation: August 13th, 2013
Gene Model: August 24th, 2014
80 days agozmm31 Zea mays MADS31:
5.01
GRMZM2G071620
Incognito, SJP et al. 2020. Euphytica 216:20     Reference: January 14th, 2020
Variation: August 7th, 2008
Gene Model: July 2nd, 2014
80 days agod*-3010 dwarf candidate3010: andromonoecious, GA3 responsive, prospective Mu1-associated allele of d3
9.03
   Incognito, SJP et al. 2020. Euphytica 216:20     Reference: January 14th, 2020
Variation: September 1st, 2003
80 days agogl*-N681A glossyN681A: like gl1 but seedling short with narrow stiff leaves
5.00 - 5.04
   Incognito, SJP et al. 2020. Euphytica 216:20     Reference: January 14th, 2020
Variation: September 1st, 2003
81 days agorpl13 60S ribosomal protein L13:
6.05
GRMZM2G409407
    Gene Product: January 13th, 2020
Gene Model: January 11th, 2020
81 days agomta1 mouse transplantation antigen homolog1: endosperm cDNA 5C03G09, similar to rodent ribosomal proteinendosperm cDNA 5C04D09 (uaz208) single copy, similar to Arabidopsis homolog of a mouse transplantation antigen
1.10
   Schnable, J; Freeling, M. 2011. PLoS One 6(3):e17855. doi:10.1371/journal.pone.0017855     Reference: September 27th, 2011
Gene Product: January 13th, 2020
Variation: January 26th, 2011
81 days agomta2 mouse transplantation antigen homolog2: endosperm cDNA probe 5C03G09, similar to rodent ribosomal protein
 
GRMZM2G072315
Helentjaris, T. 1994. Nucleotide sequence submission to dbEST/GenBank     Reference: September 1st, 2003
Gene Product: January 13th, 2020
Gene Model: January 12th, 2020
81 days agoIDP659  :
6.04
GRMZM2G331316
    Variation: March 31st, 2005
Gene Model: January 13th, 2020
82 days agotubg2 gamma-tubulin2: full-length cDNA; deduced amino acid sequence shows high similarity to this tubulin of Arabidopsis and others
6.05
GRMZM2G085970
    Gene Product: January 12th, 2020
Variation: July 22nd, 2015
Gene Model: May 8th, 2015
82 days agotubg1 gamma-tubulin1:
 
GRMZM2G073888
Lopez, I; Khan, S; Sevik, M; Cande, WZ; Hussey, PJ. 1995. Plant Physiol 107:309-310     Reference: September 1st, 2003
Gene Product: January 12th, 2020
Variation: July 22nd, 2015
Gene Model: July 22nd, 2015
82 days agotubg3 gamma-tubulin 3:
 
GRMZM2G008093
    Gene Product: January 12th, 2020
Gene Model: January 11th, 2020
82 days agorpl23a 60S ribosomal protein L23a:
 
GRMZM2G166659
    Gene Product: September 1st, 2003
Gene Model: January 12th, 2020
82 days agoAI665898  :
6.05
GRMZM2G142409
    Variation: March 31st, 2005
Gene Model: January 12th, 2020
83 days agots6 tasselseed6: Recessive alleles have more than two florets per spikelet, and reversed germ orientation. Dominant Ts6 tassels are compact, pistillate to mixed and ears have irregular kernel placement.
1.11
GRMZM5G862109
Du, XM et al. 2019. Frontiers Plant Sci 10:1633     Reference: January 11th, 2020
Gene Product: July 5th, 2019
Variation: December 4th, 2013
Gene Model: July 14th, 2011
Recommended by George Chuck:
September 25th, 2007
83 days agowri2 WRI1 transcription factor2:
4.08
GRMZM2G174834
Du, XM et al. 2019. Frontiers Plant Sci 10:1633     Reference: January 11th, 2020
Variation: April 11th, 2011
Gene Model: April 7th, 2011
83 days agohscf1 heat shock complementing factor1: cDNA with 2 APETALA2-like binding domains
9.03
GRMZM2G139082
Du, XM et al. 2019. Frontiers Plant Sci 10:1633     Reference: January 11th, 2020
Variation: December 22nd, 2012
Gene Model: July 28th, 2016
83 days agoereb197 AP2-EREBP-transcription factor 197: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
2.02
GRMZM2G174784
Du, XM et al. 2019. Frontiers Plant Sci 10:1633     Reference: January 11th, 2020
Variation: September 1st, 2003
Gene Model: February 17th, 2018
83 days agoereb117 AP2-EREBP-transcription factor 117: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
8.05
GRMZM2G113078
Du, XM et al. 2019. Frontiers Plant Sci 10:1633     Reference: January 11th, 2020
Variation: September 1st, 2003
Gene Model: September 20th, 2018
83 days agoereb24 AP2-EREBP-transcription factor 24: similar to Arabidopsis AP2-like ethylene-responsive transcription factorLocus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
2.02
GRMZM2G086573
Du, XM et al. 2019. Frontiers Plant Sci 10:1633     Reference: January 11th, 2020
Variation: September 1st, 2003
Gene Model: February 21st, 2018
83 days agowri1 WRI1 transcription factor1:
 
GRMZM2G124524
Du, XM et al. 2019. Frontiers Plant Sci 10:1633     Reference: January 11th, 2020
Variation: April 11th, 2011
Gene Model: April 8th, 2011
83 days agodtc1 dicarboxylate/tricarboxylate transporter1:
 
GRMZM2G042146
    Gene Product: January 11th, 2020
Gene Model: January 11th, 2020
83 days agoIDP1959  :
6.05
GRMZM2G558539
    Variation: March 31st, 2005
Gene Model: January 11th, 2020
83 days agodtc2 dicarboxylate/tricarboxylate transporter2:
6.05
GRMZM2G051630
Dong, ZB et al. 2018. Nucl Acid Res 46:5012-5028     Reference: November 22nd, 2019
Gene Product: January 11th, 2020
Gene Model: November 22nd, 2019
84 days agomha2 plasma-membrane H+ATPase2: cDNA sequence similar to plant plasma-membrane [H+]-ATPase and distinct from mha1
2.02
   Cao, YB et al. 2020. Nature communications 11:186     Reference: January 10th, 2020
Gene Product: September 1st, 2003
Variation: May 13th, 2009
84 days agobsd2 bundle sheath defective2: bundle sheath chloroplasts disrupted; high chlorophyll fluorescence, seedling lethal
1.05
   Li, HY et al. 2020. BMC Plant Biology pp.doi: 10.1186/s12870-019-2219-7     Reference: January 10th, 2020
Gene Product: September 1st, 2003
Variation: October 14th, 2009
84 days agomha13 membrane H(+)-ATPase13:
1.09
   Cao, YB et al. 2020. Nature communications 11:186     Reference: January 10th, 2020
Gene Product: September 1st, 2003
84 days agoarftf16 ARF-transcription factor 16: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Galli, M et al. 2018. Nature communications 9:4526     Reference: October 30th, 2018
Variation: January 10th, 2020
84 days agomha4 proton-exporting ATPase4:
10.07
GRMZM2G006894
Cao, YB et al. 2020. Nature communications 11:186     Reference: January 10th, 2020
Gene Product: September 1st, 2003
Variation: December 14th, 2017
Gene Model: December 14th, 2017
84 days agomha1 membrane H(+)-ATPase1: cDNA and genomic sequences similar to plant plasma membrane proton-translocating ATPase, major band in Southerns; partly contained in Bs-1 retroelement; SSR umc1207
2.09
GRMZM2G144821
Cao, YB et al. 2020. Nature communications 11:186     Reference: January 10th, 2020
Gene Product: September 1st, 2003
Variation: February 20th, 2007
Gene Model: January 22nd, 2016
84 days agomha3 membrane H(+)-ATPase3:
 
GRMZM2G104325
Cao, YB et al. 2020. Nature communications 11:186     Reference: January 10th, 2020
Gene Product: September 1st, 2003
Variation: January 22nd, 2016
Gene Model: January 22nd, 2016
84 days agonsa1 Na+ content under saline-alkaline conditions1: involved in Na+ homeostasis; mutants promote root Na+ efflux
 
GRMZM2G000397
Cao, YB et al. 2020. Nature communications 11:186     Reference: January 10th, 2020
Gene Product: January 10th, 2020
Variation: January 10th, 2020
Gene Model: January 10th, 2020
84 days agomha5 membrane H(+)-ATPase5:
 
GRMZM2G341058
Cao, YB et al. 2020. Nature communications 11:186     Reference: January 10th, 2020
Gene Product: September 1st, 2003
Gene Model: January 10th, 2020
84 days agomha6 membrane H(+)-ATPase6:
 
GRMZM2G008122
Cao, YB et al. 2020. Nature communications 11:186     Reference: January 10th, 2020
Gene Product: September 1st, 2003
Gene Model: January 10th, 2020
84 days agomha7 membrane H(+)-ATPase7:
 
GRMZM2G148374
Cao, YB et al. 2020. Nature communications 11:186     Reference: January 10th, 2020
Gene Product: September 1st, 2003
Gene Model: January 10th, 2020
84 days agomha8 membrane H(+)-ATPase8:
 
GRMZM2G455557
Cao, YB et al. 2020. Nature communications 11:186     Reference: January 10th, 2020
Gene Product: September 1st, 2003
Gene Model: January 10th, 2020
84 days agomha10 membrane H(+)-ATPase10:
 
GRMZM2G131309
Cao, YB et al. 2020. Nature communications 11:186     Reference: January 10th, 2020
Gene Product: September 1st, 2003
Gene Model: January 10th, 2020
84 days agomha11 membrane H(+)-ATPase11:
 
GRMZM2G172183
Cao, YB et al. 2020. Nature communications 11:186     Reference: January 10th, 2020
Gene Product: September 1st, 2003
Gene Model: January 10th, 2020
84 days agomha12 membrane H(+)-ATPase12:
 
GRMZM2G035520
Cao, YB et al. 2020. Nature communications 11:186     Reference: January 10th, 2020
Gene Product: September 1st, 2003
Gene Model: January 10th, 2020
84 days agomha9 membrane H(+)-ATPase9:
 
AC209050.3_FG001
Cao, YB et al. 2020. Nature communications 11:186     Reference: January 10th, 2020
Gene Product: September 1st, 2003
Gene Model: January 10th, 2020
85 days agoznf7 zinc finger protein7:
 
GRMZM2G302912
    Gene Product: January 9th, 2020
Gene Model: January 8th, 2020
85 days agoznf8 zinc finger protein8:
6.05
GRMZM2G061980
    Gene Product: January 9th, 2020
Gene Model: January 8th, 2020
85 days agogrx2 glutaredoxin 2:
6.05
GRMZM2G318213
    Variation: March 31st, 2005
Gene Model: January 9th, 2020
85 days agoIDP86  :
6.05
GRMZM5G874277
    Variation: March 31st, 2005
Gene Model: January 9th, 2020
86 days agorps21b 40S ribosomal protein S21b:
 
GRMZM2G134109
Dresselhaus, T et al. 1999. Mol Gen Genet 261:416-427     Reference: September 1st, 2003
Gene Product: September 1st, 2003
Variation: July 14th, 2008
Gene Model: January 8th, 2020
86 days agopfk3 phosphofructokinase3:
 
GRMZM2G401970
    Gene Product: January 8th, 2020
Gene Model: January 8th, 2020
87 days agoras1 ras related protein1: rab2-homologous cDNA
2.04
GRMZM2G330430
Zhang, JM et al. 2007. J Integr Plant Biol 49:1129-1141     Reference: January 12th, 2011
Gene Product: January 7th, 2020
Variation: January 14th, 2011
Gene Model: October 25th, 2013
87 days agozp27 27-kDa zein protein: proline rich; least abundant of zeins in endosperm, not clear if all in zp27 cluster
7.02
   Li, CS et al. 2020. Nature communications 11:17     Reference: January 7th, 2020
Gene Product: September 17th, 2010
Variation: December 10th, 2019
87 days agocyp28 cytochrome P-450 28:
 
GRMZM2G132478
    Gene Product: March 25th, 2019
Gene Model: January 7th, 2020
87 days agolic1 lichenase1:
 
GRMZM2G041961
    Gene Product: January 7th, 2020
Gene Model: January 7th, 2020
87 days agolic2 lichenase2:
 
GRMZM2G137535
    Gene Product: January 7th, 2020
Gene Model: January 7th, 2020
87 days agorbp1 ran-binding protein1:
 
AC213884.3_FG001
    Gene Product: January 7th, 2020
Gene Model: January 7th, 2020
87 days agoIDP635  :
6.05
GRMZM2G088669
    Variation: March 31st, 2005
Gene Model: January 7th, 2020
88 days agoosca6 hyperosmolality-gated calcium-permeable channels6: encodes a class II OSCA
3.04
GRMZM2G163059
Cao, LR et al. 2019. Int J Mol Sci 21:351     Reference: January 6th, 2020
Gene Product: January 6th, 2020
Gene Model: April 3rd, 2018
88 days agoatg12 autophagy12: Mutants are phenotypically normal and fertile when grown under nutrient-rich conditions. However, when nitrogen-starved, seedling growth is severely arrested, and as the plants mature, they show enhanced leaf senescence and stunted ear development.
 
GRMZM5G842517
Chairez Tejeda, L-H et al. 2020. Biotechnology Research and Innovation doi: 10.1016/j.biori.2019.12.001     Reference: January 6th, 2020
Variation: August 15th, 2017
Gene Model: August 15th, 2017
88 days agoosca1 hyperosmolality-gated calcium-permeable channels1: encodes a class I OSCA
 
GRMZM2G064189
Cao, LR et al. 2019. Int J Mol Sci 21:351     Reference: January 6th, 2020
Gene Product: January 6th, 2020
Gene Model: January 6th, 2020
88 days agoosca2 hyperosmolality-gated calcium-permeable channels2: encodes a class I OSCA
 
GRMZM2G021194
Cao, LR et al. 2019. Int J Mol Sci 21:351     Reference: January 6th, 2020
Gene Product: January 6th, 2020
Gene Model: January 6th, 2020
88 days agoosca4 hyperosmolality-gated calcium-permeable channels4: encodes a class I OSCA
 
GRMZM2G181206
Cao, LR et al. 2019. Int J Mol Sci 21:351     Reference: January 6th, 2020
Gene Product: January 6th, 2020
Gene Model: January 6th, 2020
88 days agoosca5 hyperosmolality-gated calcium-permeable channels5: encodes a class I OSCA
 
GRMZM2G128641
Cao, LR et al. 2019. Int J Mol Sci 21:351     Reference: January 6th, 2020
Gene Product: January 6th, 2020
Gene Model: January 6th, 2020
88 days agoosca7 hyperosmolality-gated calcium-permeable channels7: encodes a class II OSCA
 
GRMZM2G409093
Cao, LR et al. 2019. Int J Mol Sci 21:351     Reference: January 6th, 2020
Gene Product: January 6th, 2020
Gene Model: January 6th, 2020
88 days agoosca8 hyperosmolality-gated calcium-permeable channels8: encodes a class II OSCA
 
GRMZM2G164470
Cao, LR et al. 2019. Int J Mol Sci 21:351     Reference: January 6th, 2020
Gene Product: January 6th, 2020
Gene Model: January 6th, 2020
88 days agoosca9 hyperosmolality-gated calcium-permeable channels9: encodes a class II OSCA
 
GRMZM2G039186
Cao, LR et al. 2019. Int J Mol Sci 21:351     Reference: January 6th, 2020
Gene Product: January 6th, 2020
Gene Model: January 6th, 2020
88 days agoosca10 hyperosmolality-gated calcium-permeable channels10: encodes a class II OSCA
 
GRMZM2G402708
Cao, LR et al. 2019. Int J Mol Sci 21:351     Reference: January 6th, 2020
Gene Product: January 6th, 2020
Gene Model: January 6th, 2020
88 days agoosca11 hyperosmolality-gated calcium-permeable channels11: encodes a class III OSCA
 
GRMZM2G162253
Cao, LR et al. 2019. Int J Mol Sci 21:351     Reference: January 6th, 2020
Gene Product: January 6th, 2020
Gene Model: January 6th, 2020
88 days agoosca12 hyperosmolality-gated calcium-permeable channels12: encodes a class IV OSCA
 
GRMZM2G059891
Cao, LR et al. 2019. Int J Mol Sci 21:351     Reference: January 6th, 2020
Gene Product: January 6th, 2020
Gene Model: January 6th, 2020
88 days agoosca3 hyperosmolality-gated calcium-permeable channels3: encodes a class I OSCA
8.03
GRMZM2G456000
Cao, LR et al. 2019. Int J Mol Sci 21:351     Reference: January 6th, 2020
Gene Product: January 6th, 2020
Gene Model: January 6th, 2020
88 days agoAY104589  :
6.05
GRMZM2G479608
    Variation: March 21st, 2007
Gene Model: January 6th, 2020
88 days agoatg8b autophagy8b:
10.06
GRMZM2G419694
Chairez Tejeda, L-H et al. 2020. Biotechnology Research and Innovation doi: 10.1016/j.biori.2019.12.001     Reference: January 6th, 2020
Variation: March 31st, 2005
Gene Model: August 15th, 2017
89 days agoumc1462  :
6.05
GRMZM2G033641
    Variation: September 1st, 2003
Gene Model: January 5th, 2020
89 days agoAY107881  :
6.05
GRMZM5G833124
    Variation: September 25th, 2007
Gene Model: January 5th, 2020
90 days agomads68 MADS-transcription factor 68: Ortholog of rice MADS47; regulates zein gene transcription by interacting with o2 (Qiao et al., 2016)
1.02
GRMZM2G059102
Li, CB; Song, RT. 2020. Theor Appl Genet pp.doi: 10.1007/s00122-019-03520-z   LOC_Os03g08754 (MSU/TIGR) Reference: January 4th, 2020
Variation: April 15th, 2016
Gene Model: April 15th, 2016
90 days agofl1 floury endosperm1: (was o4) endosperm opaque, soft; dosage effect with fl1-ref allele, but o4 allele is recessive
2.04
GRMZM2G094532
Li, CB; Song, RT. 2020. Theor Appl Genet pp.doi: 10.1007/s00122-019-03520-z     Reference: January 4th, 2020
Gene Product: July 8th, 2013
Variation: September 16th, 2010
Gene Model: July 8th, 2013
90 days agoo1 opaque endosperm1: endosperm starch soft, opaque
4.08 - 4.08
GRMZM2G449909
Li, CB; Song, RT. 2020. Theor Appl Genet pp.doi: 10.1007/s00122-019-03520-z     Reference: January 4th, 2020
Gene Product: September 1st, 2003
Variation: October 9th, 2017
Gene Model: August 28th, 2012
90 days agoo10 opaque endosperm10: like o1
 
GRMZM2G346263
Li, CB; Song, RT. 2020. Theor Appl Genet pp.doi: 10.1007/s00122-019-03520-z     Reference: January 4th, 2020
Gene Product: August 20th, 2016
Variation: August 20th, 2016
Gene Model: August 20th, 2016
90 days agoo7 opaque endosperm7: like o1; high lysine content
10.07
GRMZM2G074759
Li, CB; Song, RT. 2020. Theor Appl Genet pp.doi: 10.1007/s00122-019-03520-z     Reference: January 4th, 2020
Gene Product: December 20th, 2011
Variation: February 20th, 2012
Gene Model: December 16th, 2011
90 days agopbf1 prolamin-box binding factor1: endosperm cDNA, SSR umc1065
2.06
   Li, CB; Song, RT. 2020. Theor Appl Genet pp.doi: 10.1007/s00122-019-03520-z     Reference: January 4th, 2020
Gene Product: September 1st, 2003
Variation: April 20th, 2005
90 days agonactf130 NAC-transcription factor 130: Involved in coordinating the accumulation of starch and proteins by regulating the expression of key starch biosynthetic enzymes and the major seed proteins (Zhang et al., 2019)
 
   Li, CB; Song, RT. 2020. Theor Appl Genet pp.doi: 10.1007/s00122-019-03520-z     Reference: January 4th, 2020
Gene Product: July 8th, 2019
90 days agonkd2 naked endosperm2: double mutants have multiple (2-5) layers of peripheral endosperm cells that lack starch granules or other features of starchy endosperm
10.06
GRMZM5G884137
Li, CB; Song, RT. 2020. Theor Appl Genet pp.doi: 10.1007/s00122-019-03520-z     Reference: January 4th, 2020
Gene Product: January 3rd, 2015
Variation: December 21st, 2017
Gene Model: December 21st, 2017
90 days agode30 defective endosperm B30: dominant De*-B30 has opaque, high lysine endosperm
7.01 - 7.02
AF546188.1_FG007
Li, CB; Song, RT. 2020. Theor Appl Genet pp.doi: 10.1007/s00122-019-03520-z     Reference: January 4th, 2020
Gene Product: September 1st, 2003
Variation: September 15th, 2014
Gene Model: September 14th, 2014
90 days agonrp1 no-apical-meristem-related protein1: Involved in coordinating the accumulation of starch and proteins by regulating the expression of key starch biosynthetic enzymes and the major seed proteins (Zhang et al., 2019)
 
GRMZM2G062650
Li, CB; Song, RT. 2020. Theor Appl Genet pp.doi: 10.1007/s00122-019-03520-z     Reference: January 4th, 2020
Gene Product: July 8th, 2019
Variation: March 31st, 2011
Gene Model: July 28th, 2016
90 days agoks2 kaurene synthase2:
 
GRMZM2G093526
Yang, PP et al. 2020. Plant Mol Biol pp.doi: 10.1007/s11105-019-01190-1     Reference: January 4th, 2020
Gene Product: August 16th, 2012
Gene Model: October 27th, 2014
90 days agoarodh1 arogenate dehydrogenase1: mutants have retarded vegetative growth and opaque endosperm
 
GRMZM2G084942
Li, CB; Song, RT. 2020. Theor Appl Genet pp.doi: 10.1007/s00122-019-03520-z     Reference: January 4th, 2020
Gene Product: July 7th, 2018
Variation: July 7th, 2018
Gene Model: October 4th, 2017
90 days agoohp3 opaque2 heterodimerizing protein3:
8.05
GRMZM2G143469
Li, CB; Song, RT. 2020. Theor Appl Genet pp.doi: 10.1007/s00122-019-03520-z     Reference: January 4th, 2020
Gene Product: August 21st, 2018
Gene Model: September 24th, 2018
91 days agoumc1474  :
6.05
GRMZM2G100641
    Variation: September 1st, 2003
Gene Model: January 3rd, 2020
3 months agoncp1 nine complex protein1: acts as a negative regulator of ABA signaling by interacting with and inhibiting the activity of transcriptional activator ABP9 (abre1)
 
AC197717.3_FG002
Zong, N et al. 2020. Plant Mol Biol pp.doi: 10.1007/s11103-019-00951-6     Reference: January 2nd, 2020
Gene Product: January 2nd, 2020
Gene Model: January 2nd, 2020
3 months agoncp2 nine complex protein2: 38% homology with ncp1
 
GRMZM5G831577
Zong, N et al. 2020. Plant Mol Biol pp.doi: 10.1007/s11103-019-00951-6     Reference: January 2nd, 2020
Gene Product: January 2nd, 2020
Gene Model: January 2nd, 2020
3 months agoncp3 nine complex protein3: 57% homology with ncp1 at C-terminal
 
GRMZM2G053831
Zong, N et al. 2020. Plant Mol Biol pp.doi: 10.1007/s11103-019-00951-6     Reference: January 2nd, 2020
Gene Product: January 2nd, 2020
Gene Model: January 2nd, 2020
3 months agoabre1 ABA-responsive cis-element binding protein1: encoded protein specifically binds to ABRE2 motifs and activates the expression of downstream reporter genes
 
   Zong, N et al. 2020. Plant Mol Biol pp.doi: 10.1007/s11103-019-00951-6     Reference: January 2nd, 2020
Gene Product: January 2nd, 2020
3 months agoIDP843  :
6.05
GRMZM2G061105
    Variation: March 31st, 2005
Gene Model: January 1st, 2020
3 months agorpl33 50S ribosomal protein L33:
6.06
GRMZM2G176133
    Variation: March 31st, 2005
Gene Model: December 31st, 2019
3 months agomdh3 malate dehydrogenase3: electrophoretic mobility; null allele is known; mitochondrial; dimeric; intra/interlocus hybrid bands occur
3.08
GRMZM2G466833
Liu, YM et al. 2019. BMC Plant Biology 19:592     Reference: December 30th, 2019
Gene Product: September 1st, 2003
Variation: September 1st, 2003
Gene Model: September 30th, 2015
3 months agosrs1 SHI/STY (SRS)-transcription factor 1: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   He, B et al. 2019. J Genet 99:3     Reference: December 30th, 2019
Gene Product: April 27th, 2015
3 months agosrs2 SHI/STY (SRS)-transcription factor 2: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   He, B et al. 2019. J Genet 99:3     Reference: December 30th, 2019
Gene Product: April 27th, 2015
3 months agosrs3 SHI/STY (SRS)-transcription factor 3: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   He, B et al. 2019. J Genet 99:3     Reference: December 30th, 2019
Gene Product: April 27th, 2015
3 months agosrs4 SHI/STY (SRS)-transcription factor 4: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   He, B et al. 2019. J Genet 99:3     Reference: December 30th, 2019
Gene Product: April 27th, 2015
3 months agosrs5 SHI/STY (SRS)-transcription factor 5: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   He, B et al. 2019. J Genet 99:3     Reference: December 30th, 2019
Gene Product: April 27th, 2015
3 months agosrs6 SHI/STY (SRS)-transcription factor 6: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.similar to lateral root primordium protein-like protein of A. thaliana
 
   He, B et al. 2019. J Genet 99:3     Reference: December 30th, 2019
Gene Product: April 27th, 2015
3 months agosrs7 SHI/STY (SRS)-transcription factor 7: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   He, B et al. 2019. J Genet 99:3     Reference: December 30th, 2019
Gene Product: April 27th, 2015
3 months agosrs8 SHI/STY (SRS)-transcription factor 8: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   He, B et al. 2019. J Genet 99:3     Reference: December 30th, 2019
Gene Product: April 27th, 2015
3 months agolrp1 lateral root primordia1: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   He, B et al. 2019. J Genet 99:3   AT5G12330 (TAIR) Reference: December 30th, 2019
Gene Product: April 27th, 2015
3 months agoimd4 isopropylmalate dehydrogenase4:
 
GRMZM2G120857
Liu, YM et al. 2019. BMC Plant Biology 19:592     Reference: December 30th, 2019
Gene Product: September 1st, 2003
Gene Model: July 27th, 2017
3 months agoscoal1 succinyl-CoA ligase1:
 
GRMZM2G064695
Liu, YM et al. 2019. BMC Plant Biology 19:592     Reference: December 30th, 2019
Gene Product: December 30th, 2019
Gene Model: December 30th, 2019
3 months agoaco12 aconitase12:
1.01
GRMZM2G176397
Liu, YM et al. 2019. BMC Plant Biology 19:592     Reference: December 30th, 2019
Gene Product: September 1st, 2003
Variation: March 31st, 2005
Gene Model: February 10th, 2019
3 months agofl2 floury2: endosperm opaque, soft; dosage effect; encodes an abnormal 24kDa alpha-zein, blocked in removal of its signal peptide, preventing transfer to lumen of the endoplasmic reticulummRNA for 22kD zein; in z1c(zp22) cluster
4.03
GRMZM2G397687
Khan, NU et al. 2019. Food Production, Processing and Nutrition 1:13     Reference: December 28th, 2019
Gene Product: September 1st, 2003
Variation: October 17th, 2014
Gene Model: December 19th, 2011
3 months agofl3 floury3: endosperm opaque, soft; dosage effect
8.03
GRMZM2G006585
Khan, NU et al. 2019. Food Production, Processing and Nutrition 1:13     Reference: December 28th, 2019
Gene Product: September 7th, 2017
Variation: September 7th, 2017
Gene Model: September 7th, 2017
3 months agomc1 mucronate1: dominant Mc1 kernels have opaque endospermendosperm-specific protein cDNA
2.06
GRMZM2G060429
Khan, NU et al. 2019. Food Production, Processing and Nutrition 1:13     Reference: December 28th, 2019
Gene Product: September 17th, 2010
Variation: September 16th, 2010
Gene Model: August 4th, 2018
3 months agoo5 opaque endosperm5: like o1; virescent to yellow or white seedlings
7.02
GRMZM2G142873
Khan, NU et al. 2019. Food Production, Processing and Nutrition 1:13     Reference: December 28th, 2019
Gene Product: June 17th, 2011
Variation: August 29th, 2011
Gene Model: September 19th, 2011
3 months agopro1 proline responding1: (allele o6) crumpled opaque kernel; green-striped lethal seedling; responds to proline in culture
8.04
GRMZM2G375504
Khan, NU et al. 2019. Food Production, Processing and Nutrition 1:13     Reference: December 28th, 2019
Gene Product: March 19th, 2015
Variation: September 18th, 2018
Gene Model: June 22nd, 2014
3 months agopmei36 pectin methylesterase inhibitor36:
2.09
GRMZM2G066950
Zhang, PP et al. 2019. Sci. Rep. 9:19918     Reference: December 27th, 2019
Gene Product: January 8th, 2019
Variation: September 1st, 2003
Gene Model: December 28th, 2019
3 months agopmei40 pectin methylesterase inhibitor40:
9.03
GRMZM2G040311
Zhang, PP et al. 2019. Sci. Rep. 9:19918     Reference: December 27th, 2019
Gene Product: January 8th, 2019
Gene Model: December 28th, 2019
3 months agopmei17 pectin methylesterase inhibitor17:
1.11
GRMZM2G458349
Zhang, PP et al. 2019. Sci. Rep. 9:19918     Reference: December 27th, 2019
Gene Product: January 8th, 2019
Gene Model: December 28th, 2019
3 months agopme36 pectin methylesterase36:
2.03
GRMZM2G162333
Zhang, PP et al. 2019. Sci. Rep. 9:19918     Reference: December 27th, 2019
Gene Product: September 10th, 2018
Gene Model: December 28th, 2019
3 months agopme31 pectin methylesterase31:
3.09
GRMZM2G004927
Zhang, PP et al. 2019. Sci. Rep. 9:19918     Reference: December 27th, 2019
Gene Product: September 10th, 2018
Gene Model: December 28th, 2019
3 months agofl4 floury4: semi-dominant opaque mutant that produces small, misshapen, and aggregated protein bodies; encodes member of 19kD α-zein z1A-1 subfamily
 
GRMZM2G353272
Khan, NU et al. 2019. Food Production, Processing and Nutrition 1:13     Reference: December 28th, 2019
Gene Product: April 9th, 2014
Variation: April 8th, 2014
Gene Model: April 9th, 2014
3 months agopme44 pectin methylesterase44:
 
GRMZM2G043415
Zhang, PP et al. 2019. Sci. Rep. 9:19918     Reference: December 27th, 2019
Gene Product: September 10th, 2018
Gene Model: December 28th, 2019
3 months agopme7 pectin methylesterase7:
 
GRMZM2G314663
Zhang, PP et al. 2019. Sci. Rep. 9:19918     Reference: December 27th, 2019
Gene Product: September 10th, 2018
Gene Model: December 28th, 2019
3 months agopme18 pectin methylesterase18:
 
GRMZM2G062996
Zhang, PP et al. 2019. Sci. Rep. 9:19918     Reference: December 27th, 2019
Gene Product: September 10th, 2018
Gene Model: December 28th, 2019
3 months agopme6 pectin methylesterase6:
 
GRMZM2G012328
Zhang, PP et al. 2019. Sci. Rep. 9:19918     Reference: December 27th, 2019
Gene Product: September 10th, 2018
Gene Model: December 28th, 2019
3 months agopme8 pectin methylesterase8:
 
GRMZM2G128549
Zhang, PP et al. 2019. Sci. Rep. 9:19918     Reference: December 27th, 2019
Gene Product: September 10th, 2018
Gene Model: December 28th, 2019
3 months agopme9 pectin methylesterase9:
 
GRMZM2G352359
Zhang, PP et al. 2019. Sci. Rep. 9:19918     Reference: December 27th, 2019
Gene Product: September 10th, 2018
Gene Model: December 28th, 2019
3 months agopme10 pectin methylesterase10:
 
GRMZM2G321870
Zhang, PP et al. 2019. Sci. Rep. 9:19918     Reference: December 27th, 2019
Gene Product: September 10th, 2018
Gene Model: December 28th, 2019
3 months agopme11 pectin methylesterase11:
 
GRMZM2G112984
Zhang, PP et al. 2019. Sci. Rep. 9:19918     Reference: December 27th, 2019
Gene Product: September 10th, 2018
Gene Model: December 28th, 2019
3 months agopme12 pectin methylesterase12:
 
GRMZM2G158240
Zhang, PP et al. 2019. Sci. Rep. 9:19918     Reference: December 27th, 2019
Gene Product: September 10th, 2018
Gene Model: December 28th, 2019
3 months agopme13 pectin methylesterase13:
 
GRMZM2G008593
Zhang, PP et al. 2019. Sci. Rep. 9:19918     Reference: December 27th, 2019
Gene Product: September 10th, 2018
Gene Model: December 28th, 2019
3 months agopme14 pectin methylesterase14:
 
GRMZM2G017555
Zhang, PP et al. 2019. Sci. Rep. 9:19918     Reference: December 27th, 2019
Gene Product: September 10th, 2018
Gene Model: December 28th, 2019
3 months agopme15 pectin methylesterase15:
 
GRMZM2G175499
Zhang, PP et al. 2019. Sci. Rep. 9:19918     Reference: December 27th, 2019
Gene Product: September 10th, 2018
Gene Model: December 28th, 2019
3 months agopme16 pectin methylesterase16:
 
GRMZM2G119864
Zhang, PP et al. 2019. Sci. Rep. 9:19918     Reference: December 27th, 2019
Gene Product: September 10th, 2018
Gene Model: December 28th, 2019
3 months agopme17 pectin methylesterase17:
 
GRMZM2G128682
Zhang, PP et al. 2019. Sci. Rep. 9:19918     Reference: December 27th, 2019
Gene Product: September 10th, 2018
Gene Model: December 28th, 2019
3 months agopme19 pectin methylesterase19:
 
GRMZM2G136106
Zhang, PP et al. 2019. Sci. Rep. 9:19918     Reference: December 27th, 2019
Gene Product: September 10th, 2018
Gene Model: December 28th, 2019
3 months agopme20 pectin methylesterase20:
 
GRMZM2G025182
Zhang, PP et al. 2019. Sci. Rep. 9:19918     Reference: December 27th, 2019
Gene Product: September 10th, 2018
Gene Model: December 28th, 2019
3 months agopme21 pectin methylesterase21:
 
AC212451.4_FG009
Zhang, PP et al. 2019. Sci. Rep. 9:19918     Reference: December 27th, 2019
Gene Product: September 10th, 2018
Gene Model: December 28th, 2019
3 months agopme22 pectin methylesterase22:
 
GRMZM2G167637
Zhang, PP et al. 2019. Sci. Rep. 9:19918     Reference: December 27th, 2019
Gene Product: September 10th, 2018
Gene Model: December 28th, 2019
3 months agopme23 pectin methylesterase23:
 
GRMZM2G442593
Zhang, PP et al. 2019. Sci. Rep. 9:19918     Reference: December 27th, 2019
Gene Product: September 10th, 2018
Gene Model: December 28th, 2019
3 months agopme24 pectin methylesterase24:
 
GRMZM2G404767
Zhang, PP et al. 2019. Sci. Rep. 9:19918     Reference: December 27th, 2019
Gene Product: September 10th, 2018
Gene Model: December 28th, 2019
3 months agopme25 pectin methylesterase25:
 
GRMZM2G393762
Zhang, PP et al. 2019. Sci. Rep. 9:19918     Reference: December 27th, 2019
Gene Product: September 10th, 2018
Gene Model: December 28th, 2019
3 months agopme26 pectin methylesterase26:
 
GRMZM2G019411
Zhang, PP et al. 2019. Sci. Rep. 9:19918     Reference: December 27th, 2019
Gene Product: September 10th, 2018
Gene Model: December 28th, 2019
3 months agopme27 pectin methylesterase27:
 
GRMZM2G123018
Zhang, PP et al. 2019. Sci. Rep. 9:19918     Reference: December 27th, 2019
Gene Product: September 10th, 2018
Gene Model: December 28th, 2019
3 months agopme28 pectin methylesterase28:
 
GRMZM2G178916
Zhang, PP et al. 2019. Sci. Rep. 9:19918     Reference: December 27th, 2019
Gene Product: September 10th, 2018
Gene Model: December 28th, 2019
3 months agopme29 pectin methylesterase29:
 
GRMZM2G440016
Zhang, PP et al. 2019. Sci. Rep. 9:19918     Reference: December 27th, 2019
Gene Product: September 10th, 2018
Gene Model: December 28th, 2019
3 months agopme30 pectin methylesterase30:
 
GRMZM2G121278
Zhang, PP et al. 2019. Sci. Rep. 9:19918     Reference: December 27th, 2019
Gene Product: September 10th, 2018
Gene Model: December 28th, 2019
3 months agopme32 pectin methylesterase32:
 
GRMZM2G318299
Zhang, PP et al. 2019. Sci. Rep. 9:19918     Reference: December 27th, 2019
Gene Product: September 10th, 2018
Gene Model: December 28th, 2019
3 months agopme33 pectin methylesterase33:
 
GRMZM2G070913
Zhang, PP et al. 2019. Sci. Rep. 9:19918     Reference: December 27th, 2019
Gene Product: September 10th, 2018
Gene Model: December 28th, 2019
3 months agopme34 pectin methylesterase34:
 
GRMZM2G422631
Zhang, PP et al. 2019. Sci. Rep. 9:19918     Reference: December 27th, 2019
Gene Product: September 10th, 2018
Gene Model: December 28th, 2019
3 months agopme35 pectin methylesterase35:
 
GRMZM2G455564
Zhang, PP et al. 2019. Sci. Rep. 9:19918     Reference: December 27th, 2019
Gene Product: September 10th, 2018
Gene Model: December 28th, 2019
3 months agopme37 pectin methylesterase37:
 
GRMZM2G043943
Zhang, PP et al. 2019. Sci. Rep. 9:19918     Reference: December 27th, 2019
Gene Product: September 10th, 2018
Gene Model: December 28th, 2019
3 months agopme38 pectin methylesterase38:
 
GRMZM2G071339
Zhang, PP et al. 2019. Sci. Rep. 9:19918     Reference: December 27th, 2019
Gene Product: September 10th, 2018
Gene Model: December 28th, 2019
3 months agopme39 pectin methylesterase39:
 
GRMZM2G120779
Zhang, PP et al. 2019. Sci. Rep. 9:19918     Reference: December 27th, 2019
Gene Product: September 10th, 2018
Gene Model: December 28th, 2019
3 months agopme40 pectin methylesterase40:
 
GRMZM2G177940
Zhang, PP et al. 2019. Sci. Rep. 9:19918     Reference: December 27th, 2019
Gene Product: September 10th, 2018
Gene Model: December 28th, 2019
3 months agopme41 pectin methylesterase41:
 
GRMZM2G037411
Zhang, PP et al. 2019. Sci. Rep. 9:19918     Reference: December 27th, 2019
Gene Product: September 10th, 2018
Gene Model: December 28th, 2019
3 months agopme42 pectin methylesterase42:
 
GRMZM2G382557
Zhang, PP et al. 2019. Sci. Rep. 9:19918     Reference: December 27th, 2019
Gene Product: September 10th, 2018
Gene Model: December 28th, 2019
3 months agopmei13 pectin methylesterase inhibitor13:
 
GRMZM2G482245
Zhang, PP et al. 2019. Sci. Rep. 9:19918     Reference: December 27th, 2019
Gene Product: January 8th, 2019
Gene Model: December 28th, 2019
3 months agopmei21 pectin methylesterase inhibitor21:
 
GRMZM2G458200
Zhang, PP et al. 2019. Sci. Rep. 9:19918     Reference: December 27th, 2019
Gene Product: January 8th, 2019
Gene Model: December 28th, 2019
3 months agopmei7 pectin methylesterase inhibitor7:
 
GRMZM2G451028
Zhang, PP et al. 2019. Sci. Rep. 9:19918     Reference: December 27th, 2019
Gene Product: January 8th, 2019
Gene Model: December 28th, 2019
3 months agopmei8 pectin methylesterase inhibitor8:
 
GRMZM2G439908
Zhang, PP et al. 2019. Sci. Rep. 9:19918     Reference: December 27th, 2019
Gene Product: January 8th, 2019
Gene Model: December 28th, 2019
3 months agopmei9 pectin methylesterase inhibitor9:
 
GRMZM2G380284
Zhang, PP et al. 2019. Sci. Rep. 9:19918     Reference: December 27th, 2019
Gene Product: January 8th, 2019
Gene Model: December 28th, 2019
3 months agopmei10 pectin methylesterase inhibitor10:
 
GRMZM2G369432
Zhang, PP et al. 2019. Sci. Rep. 9:19918     Reference: December 27th, 2019
Gene Product: January 8th, 2019
Gene Model: December 28th, 2019
3 months agopmei12 pectin methylesterase inhibitor12:
 
GRMZM2G362828
Zhang, PP et al. 2019. Sci. Rep. 9:19918     Reference: December 27th, 2019
Gene Product: January 8th, 2019
Gene Model: December 28th, 2019
3 months agopmei14 pectin methylesterase inhibitor14:
 
GRMZM2G339129
Zhang, PP et al. 2019. Sci. Rep. 9:19918     Reference: December 27th, 2019
Gene Product: January 8th, 2019
Gene Model: December 28th, 2019
3 months agopmei16 pectin methylesterase inhibitor16:
 
GRMZM2G309944
Zhang, PP et al. 2019. Sci. Rep. 9:19918     Reference: December 27th, 2019
Gene Product: January 8th, 2019
Gene Model: December 28th, 2019
3 months agopmei11 pectin methylesterase inhibitor11:
 
GRMZM5G891247
Zhang, PP et al. 2019. Sci. Rep. 9:19918     Reference: December 27th, 2019
Gene Product: January 8th, 2019
Gene Model: December 28th, 2019
3 months agopmei18 pectin methylesterase inhibitor18:
 
GRMZM2G174263
Zhang, PP et al. 2019. Sci. Rep. 9:19918     Reference: December 27th, 2019
Gene Product: January 8th, 2019
Gene Model: December 28th, 2019
3 months agopmei20 pectin methylesterase inhibitor20:
 
GRMZM2G164929
Zhang, PP et al. 2019. Sci. Rep. 9:19918     Reference: December 27th, 2019
Gene Product: January 8th, 2019
Gene Model: December 28th, 2019
3 months agopmei22 pectin methylesterase inhibitor22:
 
GRMZM2G157873
Zhang, PP et al. 2019. Sci. Rep. 9:19918     Reference: December 27th, 2019
Gene Product: January 8th, 2019
Gene Model: December 28th, 2019
3 months agopmei23 pectin methylesterase inhibitor23:
 
GRMZM2G157825
Zhang, PP et al. 2019. Sci. Rep. 9:19918     Reference: December 27th, 2019
Gene Product: January 8th, 2019
Gene Model: December 28th, 2019
3 months agopmei24 pectin methylesterase inhibitor24:
 
GRMZM2G152141
Zhang, PP et al. 2019. Sci. Rep. 9:19918     Reference: December 27th, 2019
Gene Product: January 8th, 2019
Gene Model: December 28th, 2019
3 months agopmei25 pectin methylesterase inhibitor25:
 
GRMZM2G138999
Zhang, PP et al. 2019. Sci. Rep. 9:19918     Reference: December 27th, 2019
Gene Product: January 8th, 2019
Gene Model: December 28th, 2019
3 months agopmei26 pectin methylesterase inhibitor26:
 
GRMZM2G133146
Zhang, PP et al. 2019. Sci. Rep. 9:19918     Reference: December 27th, 2019
Gene Product: January 8th, 2019
Gene Model: December 28th, 2019
3 months agopmei27 pectin methylesterase inhibitor27:
 
GRMZM2G129092
Zhang, PP et al. 2019. Sci. Rep. 9:19918     Reference: December 27th, 2019
Gene Product: January 8th, 2019
Gene Model: December 28th, 2019
3 months agopmei29 pectin methylesterase inhibitor29:
 
GRMZM2G116140
Zhang, PP et al. 2019. Sci. Rep. 9:19918     Reference: December 27th, 2019
Gene Product: January 8th, 2019
Gene Model: December 28th, 2019
3 months agopmei30 pectin methylesterase inhibitor30:
 
GRMZM2G101945
Zhang, PP et al. 2019. Sci. Rep. 9:19918     Reference: December 27th, 2019
Gene Product: January 8th, 2019
Gene Model: December 28th, 2019
3 months agopmei33 pectin methylesterase inhibitor33:
 
GRMZM2G078886
Zhang, PP et al. 2019. Sci. Rep. 9:19918     Reference: December 27th, 2019
Gene Product: January 8th, 2019
Gene Model: December 28th, 2019
3 months agopmei34 pectin methylesterase inhibitor34:
 
GRMZM2G078804
Zhang, PP et al. 2019. Sci. Rep. 9:19918     Reference: December 27th, 2019
Gene Product: January 8th, 2019
Gene Model: December 28th, 2019
3 months agopmei35 pectin methylesterase inhibitor35:
 
GRMZM2G067710
Zhang, PP et al. 2019. Sci. Rep. 9:19918     Reference: December 27th, 2019
Gene Product: January 8th, 2019
Gene Model: December 28th, 2019
3 months agopmei37 pectin methylesterase inhibitor37:
 
GRMZM2G057220
Zhang, PP et al. 2019. Sci. Rep. 9:19918     Reference: December 27th, 2019
Gene Product: January 8th, 2019
Gene Model: December 28th, 2019
3 months agopmei39 pectin methylesterase inhibitor39:
 
GRMZM2G046111
Zhang, PP et al. 2019. Sci. Rep. 9:19918     Reference: December 27th, 2019
Gene Product: January 8th, 2019
Gene Model: December 28th, 2019
3 months agopmei41 pectin methylesterase inhibitor41:
 
GRMZM2G035490
Zhang, PP et al. 2019. Sci. Rep. 9:19918     Reference: December 27th, 2019
Gene Product: January 8th, 2019
Gene Model: December 28th, 2019
3 months agopmei42 pectin methylesterase inhibitor42:
 
GRMZM2G034846
Zhang, PP et al. 2019. Sci. Rep. 9:19918     Reference: December 27th, 2019
Gene Product: January 8th, 2019
Gene Model: December 28th, 2019
3 months agopmei43 pectin methylesterase inhibitor43:
 
GRMZM2G008047
Zhang, PP et al. 2019. Sci. Rep. 9:19918     Reference: December 27th, 2019
Gene Product: January 8th, 2019
Gene Model: December 28th, 2019
3 months agopmei44 pectin methylesterase inhibitor44:
 
GRMZM2G003838
Zhang, PP et al. 2019. Sci. Rep. 9:19918     Reference: December 27th, 2019
Gene Product: January 8th, 2019
Gene Model: December 28th, 2019
3 months agopmei45 pectin methylesterase inhibitor45:
 
AC233850.1_FG003
Zhang, PP et al. 2019. Sci. Rep. 9:19918     Reference: December 27th, 2019
Gene Product: January 8th, 2019
Gene Model: December 28th, 2019
3 months agopmei46 pectin methylesterase inhibitor46:
 
AC233850.1_FG002
Zhang, PP et al. 2019. Sci. Rep. 9:19918     Reference: December 27th, 2019
Gene Product: January 8th, 2019
Gene Model: December 28th, 2019
3 months agopmei47 pectin methylesterase inhibitor47:
 
AC213432.2_FG004
Zhang, PP et al. 2019. Sci. Rep. 9:19918     Reference: December 27th, 2019
Gene Product: January 8th, 2019
Gene Model: December 28th, 2019
3 months agopmei48 pectin methylesterase inhibitor48:
 
AC212023.4_FG004
Zhang, PP et al. 2019. Sci. Rep. 9:19918     Reference: December 27th, 2019
Gene Product: January 8th, 2019
Gene Model: December 28th, 2019
3 months agopmei49 pectin methylesterase inhibitor49:
 
AC186577.3_FG006
Zhang, PP et al. 2019. Sci. Rep. 9:19918     Reference: December 27th, 2019
Gene Product: January 8th, 2019
Gene Model: December 28th, 2019
3 months agopmei38 pectin methylesterase inhibitor38:
6.01
GRMZM2G048430
Zhang, PP et al. 2019. Sci. Rep. 9:19918     Reference: December 27th, 2019
Gene Product: January 8th, 2019
Gene Model: December 28th, 2019
3 months agopmei15 pectin methylesterase inhibitor15:
8.01
GRMZM2G323558
Zhang, PP et al. 2019. Sci. Rep. 9:19918     Reference: December 27th, 2019
Gene Product: January 8th, 2019
Gene Model: December 28th, 2019
3 months agopme43 pectin methylesterase43:
4.00
GRMZM2G431856
Zhang, PP et al. 2019. Sci. Rep. 9:19918     Reference: December 27th, 2019
Gene Product: September 10th, 2018
Variation: March 31st, 2005
Gene Model: December 28th, 2019
3 months agocsu928  :
6.07
GRMZM2G154648
    Variation: March 21st, 2007
Gene Model: December 27th, 2019
3 months agopme1 pectin methylesterase1: pollen; cDNA and genomic sequences
10.04
GRMZM2G125356
Zhang, PP et al. 2019. Sci. Rep. 9:19918     Reference: December 27th, 2019
Gene Product: September 10th, 2018
Variation: October 8th, 2015
Gene Model: October 8th, 2015
3 months agopmei19 pectin methylesterase inhibitor19:
4.11
GRMZM2G167149
Zhang, PP et al. 2019. Sci. Rep. 9:19918     Reference: December 27th, 2019
Gene Product: January 8th, 2019
Variation: June 7th, 2018
Gene Model: June 8th, 2018
3 months agopme4 pectin methylesterase4:
 
GRMZM2G060400
Zhang, PP et al. 2019. Sci. Rep. 9:19918     Reference: December 27th, 2019
Gene Product: September 10th, 2018
Gene Model: June 4th, 2012
3 months agopme5 pectin methylesterase5: similar to pectinesterase 45 of A. thaliana
 
GRMZM2G137676
Zhang, PP et al. 2019. Sci. Rep. 9:19918     Reference: December 27th, 2019
Gene Product: September 10th, 2018
Gene Model: June 4th, 2012
3 months agopme2 pectin methylesterase2:
 
GRMZM2G046618
Zhang, PP et al. 2019. Sci. Rep. 9:19918     Reference: December 27th, 2019
Gene Product: September 10th, 2018
Gene Model: April 26th, 2014
3 months agopmei2 pectin methylesterase inhibitor2:
 
GRMZM2G122230
Zhang, PP et al. 2019. Sci. Rep. 9:19918     Reference: December 27th, 2019
Gene Product: January 8th, 2019
Gene Model: January 8th, 2019
3 months agopmei4 pectin methylesterase inhibitor4:
 
GRMZM2G457612
Zhang, PP et al. 2019. Sci. Rep. 9:19918     Reference: December 27th, 2019
Gene Product: January 8th, 2019
Gene Model: January 8th, 2019
3 months agopmei6 pectin methylesterase inhibitor6:
 
GRMZM2G343236
Zhang, PP et al. 2019. Sci. Rep. 9:19918     Reference: December 27th, 2019
Gene Product: January 8th, 2019
Gene Model: January 8th, 2019
3 months agoinvinh1 invertase inhibitor1: Interacts with incw5 (Zhao et al., 2019)
 
GRMZM2G162447
Zhang, PP et al. 2019. Sci. Rep. 9:19918     Reference: December 27th, 2019
Gene Product: August 7th, 2019
Gene Model: August 7th, 2019
3 months agoinvinh2 invertase inhibitor2:
 
GRMZM2G300141
Zhang, PP et al. 2019. Sci. Rep. 9:19918     Reference: December 27th, 2019
Gene Product: August 7th, 2019
Gene Model: August 24th, 2019
3 months agoinvinh3 invertase inhibitor3:
 
GRMZM2G096897
Zhang, PP et al. 2019. Sci. Rep. 9:19918     Reference: December 27th, 2019
Gene Product: August 7th, 2019
Gene Model: August 24th, 2019
3 months agoinvinh4 invertase inhibitor4: inhibits both cell wall and vacuolar invertase activities from maize leaves
 
GRMZM2G368698
Zhang, PP et al. 2019. Sci. Rep. 9:19918     Reference: December 27th, 2019
Gene Product: August 7th, 2019
Gene Model: August 24th, 2019
3 months agopmei1 pectin methylesterase inhibitor1:
6.07
GRMZM2G079661
Zhang, PP et al. 2019. Sci. Rep. 9:19918     Reference: December 27th, 2019
Gene Product: January 8th, 2019
Gene Model: January 8th, 2019
3 months agosig1A sigma factor 1A:
10.03
GRMZM2G006736
Yilmaz, A et al. 2009. Plant Physiol 149:171-180     Reference: May 12th, 2011
Gene Product: December 24th, 2019
Variation: October 14th, 2015
Gene Model: May 8th, 2015
Recommended by Marty Sachs:
March 7th, 2007
3 months agosig1B sigma factor 1B: sig5 locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
4.05
GRMZM2G543629
Yilmaz, A et al. 2009. Plant Physiol 149:171-180     Reference: May 12th, 2011
Gene Product: December 24th, 2019
Gene Model: May 8th, 2015
Recommended by Marty Sachs:
March 7th, 2007
3 months agosig6 sigma-like factor6:
5.00
GRMZM2G144196
Yilmaz, A et al. 2009. Plant Physiol 149:171-180     Reference: May 12th, 2011
Gene Product: December 24th, 2019
Variation: June 24th, 2015
Gene Model: May 8th, 2015
Recommended by Ed Coe:
January 25th, 2007
3 months agosig2B sigma-like factor2B:
1.03
GRMZM2G100086
Yilmaz, A et al. 2009. Plant Physiol 149:171-180     Reference: May 12th, 2011
Gene Product: December 24th, 2019
Gene Model: April 11th, 2013
Recommended by Ed Coe:
January 25th, 2007
3 months agosig2 Sigma70-like-transcription factor 2: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Hendron, R-W; Kelly, S. 2019. Plant Physiol pp.doi: 10.1104/pp.19.01053     Reference: December 23rd, 2019
Gene Product: December 24th, 2019
3 months agosig3 Sigma70-like-transcription factor 3: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Hendron, R-W; Kelly, S. 2019. Plant Physiol pp.doi: 10.1104/pp.19.01053     Reference: December 23rd, 2019
Gene Product: December 24th, 2019
3 months agosig7 Sigma70-like-transcription factor 7: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Yilmaz, A et al. 2009. Plant Physiol 149:171-180     Reference: May 12th, 2011
Gene Product: December 24th, 2019
3 months agosig8 Sigma70-like-transcription factor 8: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Yilmaz, A et al. 2009. Plant Physiol 149:171-180     Reference: May 12th, 2011
Gene Product: December 24th, 2019
3 months agosig2A sigma factor sig2A:
4.03
GRMZM2G143392
Hendron, R-W; Kelly, S. 2019. Plant Physiol pp.doi: 10.1104/pp.19.01053     Reference: December 23rd, 2019
Gene Product: December 24th, 2019
Variation: May 21st, 2005
Gene Model: May 8th, 2015
3 months agondk1 nucleotide diphosphate kinase1: leaf cDNA csu269, single copy
7.03
   Schnable, J; Freeling, M. 2011. PLoS One 6(3):e17855. doi:10.1371/journal.pone.0017855     Reference: September 27th, 2011
Gene Product: December 23rd, 2019
Variation: September 9th, 2014
Recommended by Ed Coe:
January 8th, 2008
3 months agobhlh43 bHLH-transcription factor 43: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
1.08
GRMZM2G165042
Hendron, R-W; Kelly, S. 2019. Plant Physiol pp.doi: 10.1104/pp.19.01053     Reference: December 23rd, 2019
Variation: September 1st, 2003
Gene Model: July 6th, 2017
3 months agopif3 phytochrome interacting factor3: ortholog of Arabidopsis PIF3; nuclear localized protein; transgenic expression in rice suggest role in stress response (Gao Y et al 2015)
 
GRMZM2G387528
Hendron, R-W; Kelly, S. 2019. Plant Physiol pp.doi: 10.1104/pp.19.01053   AT1G09530 (TAIR)
LOC_Os05g04740 (MSU/TIGR)
Reference: December 23rd, 2019
Gene Product: September 14th, 2016
Gene Model: May 26th, 2015
3 months agondpk1 nucleoside diphosphate kinase1: encodes a G4-binding protein
 
GRMZM2G178576
Kopylov, M et al. 2015. Biochemistry pp.DOI: 10.1021/bi501284g     Reference: February 14th, 2015
Gene Product: December 23rd, 2019
Variation: February 14th, 2015
Gene Model: February 14th, 2015
3 months agondpk4 nucleoside diphosphate kinase 4:
 
GRMZM5G833747
    Gene Product: December 23rd, 2019
Gene Model: December 23rd, 2019
3 months agophyC1 phytochromeC1: red/far red light signal receptor; major phytochrome C trancript in light and dark grown seedling leaf blade, sheath, mesocotyl. See also phyC2, phyA1, phyA2 phyB1, phyB2.
1.10
   Hendron, R-W; Kelly, S. 2019. Plant Physiol pp.doi: 10.1104/pp.19.01053     Reference: December 23rd, 2019
Gene Product: June 30th, 2009
Variation: June 30th, 2009
3 months agophyC2 phytochromeC2: red/far red light signal receptor; minor phytochrome C transcript in seedling leaf blade, sheath, mesocotyl. See also phyC1, phyA1, phyA2 phyB1, phyB2.
5.01
   Hendron, R-W; Kelly, S. 2019. Plant Physiol pp.doi: 10.1104/pp.19.01053     Reference: December 23rd, 2019
Gene Product: June 30th, 2009
Variation: June 30th, 2009
3 months agompkl1 MAP kinase-like1: encodes a functional kinase that mediates the response of maize seedlings to drought by regulating ABA homeostasis
 
GRMZM2G108829
Zhu, D et al. 2019. Plant J pp.doi: 10.1111/tpj.14660     Reference: December 21st, 2019
Gene Product: May 13th, 2014
Variation: December 21st, 2019
Gene Model: December 21st, 2019
3 months agompkl2 MAP kinase-like2:
 
GRMZM2G178822
Zhu, D et al. 2019. Plant J pp.doi: 10.1111/tpj.14660     Reference: December 21st, 2019
Gene Product: May 13th, 2014
Gene Model: December 21st, 2019
3 months agompkl4 MAP kinase-like4:
 
GRMZM2G045241
Zhu, D et al. 2019. Plant J pp.doi: 10.1111/tpj.14660     Reference: December 21st, 2019
Gene Product: May 13th, 2014
Gene Model: December 21st, 2019
3 months agonudix22 nudix type motif 22:
 
GRMZM5G886561
    Gene Product: June 18th, 2014
Gene Model: December 21st, 2019
3 months agoehd1 eps15 homology domain protein1: mutants showed defects in kernel development and vegetative growth
4.10
GRMZM2G052740
Wang, YF et al. 2019. Plant Physiol pp.doi: 10.1104/pp.19.01336     Reference: December 20th, 2019
Gene Product: December 20th, 2019
Variation: December 20th, 2019
Gene Model: August 15th, 2018
3 months agocsu204(uce)  :
8.04
GRMZM2G007276
Baysdorfer, C. 1994. cDNA sequence submission to dbEST     Reference: September 1st, 2003
Gene Product: December 19th, 2019
Gene Model: August 30th, 2019
3 months agouce3 ubiquitin conjugating enzyme3:
1.01
GRMZM2G070047
Wang, HY et al. 2019. Int J Mol Sci 21:29     Reference: December 19th, 2019
Gene Product: December 19th, 2019
Variation: February 15th, 2015
Gene Model: February 16th, 2015
3 months agocsu456(uce)  :
3.08
GRMZM5G814314
    Gene Product: December 19th, 2019
Gene Model: November 26th, 2019
3 months agocsu591(uce)  :
8.08
GRMZM5G866947
    Gene Product: December 19th, 2019
Gene Model: November 26th, 2019
3 months agouce17 ubiquitin conjugating enzyme17: homology to Arabidopsis thaliana SUMO-conjugating enzyme 1 (SCE1)
9.04
GRMZM2G163398
Wang, HY et al. 2019. Int J Mol Sci 21:29     Reference: December 19th, 2019
Gene Product: December 19th, 2019
Gene Model: November 26th, 2019
3 months agouce8 ubiquitin conjugating enzyme8:
5.03
GRMZM2G146374
    Gene Product: December 19th, 2019
Variation: August 23rd, 2017
Gene Model: August 23rd, 2017
3 months agouce13 ubiquitin conjugating enzyme13:
 
GRMZM2G085600
de Vries, A et al. 1998. Plant Physiol 118:1101   AT5G59300 (TAIR) Reference: September 1st, 2003
Gene Product: December 19th, 2019
Gene Model: November 26th, 2019
3 months agocdpk27 calcium dependent protein kinase27:
8.08
GRMZM2G311220
Parish, F et al. 2019. Front Microbiol 10:2683     Reference: December 19th, 2019
Gene Product: December 3rd, 2013
Variation: September 1st, 2003
Gene Model: January 10th, 2018
3 months agocdpk7 calcium dependent protein kinase7: unpublished root cDNA sequence
4.06
GRMZM2G081310
Parish, F et al. 2019. Front Microbiol 10:2683     Reference: December 19th, 2019
Gene Product: December 3rd, 2013
Variation: September 1st, 2003
Gene Model: March 31st, 2015
3 months agouce5 ubiquitin conjugating enzyme5:
1.10
GRMZM2G022859
Winkler, RG and Helentjaris, T. 1993. MNL 67:110-111     Reference: September 1st, 2003
Gene Product: December 19th, 2019
Variation: September 16th, 2016
Gene Model: September 16th, 2016
3 months agouce1 ubiquitin conjugating enzyme1: endosperm cDNA 2C06C11 (uaz102), similar to plant ubiquitin conjugating enzymes
1.08
GRMZM2G007381
Helentjaris, T et al. 1994. MNL 68:101-104     Reference: September 1st, 2003
Gene Product: December 19th, 2019
Variation: August 23rd, 2017
Gene Model: August 23rd, 2017
3 months agouce4 ubiquitin conjugating enzyme4:
2.01
   Xu, JH et al. 2017. Plant Physiol Biochem 117:51-60     Reference: June 5th, 2017
Gene Product: December 19th, 2019
Variation: July 29th, 2004
3 months agocdpk34 calcium dependent protein kinase34:
1.11
GRMZM2G104125
Parish, F et al. 2019. Front Microbiol 10:2683     Reference: December 19th, 2019
Gene Product: December 3rd, 2013
Gene Model: December 19th, 2019
3 months agouce2 ubiquitin conjugating enzyme2:
9.01
GRMZM2G177276
Hawkins, JS et al. 2014. Plant J 79:375-384     Reference: September 25th, 2015
Gene Product: December 19th, 2019
Gene Model: April 26th, 2014
3 months agorboh3 respiratory burst oxidase3:
 
GRMZM2G043435
Parish, F et al. 2019. Front Microbiol 10:2683     Reference: December 19th, 2019
Gene Product: July 15th, 2013
Gene Model: July 2nd, 2013
3 months agouce6 ubiquitin conjugating enzyme6:
 
GRMZM2G018447
    Gene Product: December 19th, 2019
Variation: August 23rd, 2017
Gene Model: July 7th, 2017
3 months agocdpk17 calcium dependent protein kinase17:
 
GRMZM2G025387
Parish, F et al. 2019. Front Microbiol 10:2683     Reference: December 19th, 2019
Gene Product: December 3rd, 2013
Gene Model: January 10th, 2018
3 months agocdpk18 calcium dependent protein kinase18:
 
GRMZM2G027351
Parish, F et al. 2019. Front Microbiol 10:2683     Reference: December 19th, 2019
Gene Product: December 3rd, 2013
Gene Model: January 10th, 2018
3 months agouce9 ubiquitin conjugating enzyme9:
 
GRMZM2G027378
Dechorgnat, J et al. 2018. Frontiers Plant Sci 9:531     Reference: May 10th, 2018
Gene Product: December 19th, 2019
Gene Model: May 10th, 2018
3 months agocdpk29 calcium dependent protein kinase29: pollen-specific expression; involved in the regulation of pollen germination and tube extension
 
GRMZM2G332660
Parish, F et al. 2019. Front Microbiol 10:2683     Reference: December 19th, 2019
Gene Product: December 3rd, 2013
Gene Model: May 30th, 2018
3 months agouce10 ubiquitin conjugating enzyme10:
 
GRMZM2G381709
Du, QG et al. 2018. Plant Physiol pp.doi: 10.1104/pp.18.00034   AT2G33770 (TAIR) Reference: July 2nd, 2018
Gene Product: December 19th, 2019
Gene Model: July 2nd, 2018
3 months agouce11 ubiquitin conjugating enzyme11:
 
GRMZM2G464572
Du, QG et al. 2018. Plant Physiol pp.doi: 10.1104/pp.18.00034   AT2G33770 (TAIR) Reference: July 2nd, 2018
Gene Product: December 19th, 2019
Gene Model: July 2nd, 2018
3 months agouce14 ubiquitin conjugating enzyme14:
 
GRMZM2G074479
    Gene Product: December 19th, 2019
Gene Model: November 26th, 2019
3 months agocal4 calmodulin4:
 
GRMZM2G115628
Parish, F et al. 2019. Front Microbiol 10:2683     Reference: December 19th, 2019
Gene Product: September 1st, 2003
Gene Model: December 19th, 2019
3 months agocal5 calmodulin5:
 
GRMZM2G155822
Parish, F et al. 2019. Front Microbiol 10:2683     Reference: December 19th, 2019
Gene Product: September 1st, 2003
Gene Model: December 19th, 2019
3 months agocal6 calmodulin6:
 
GRMZM2G142693
Parish, F et al. 2019. Front Microbiol 10:2683     Reference: December 19th, 2019
Gene Product: September 1st, 2003
Gene Model: December 19th, 2019
3 months agouce15 ubiquitin-conjugating enzyme15: homology to Arabidopsis thaliana SUMO-conjugating enzyme 1 (SCE1)
 
GRMZM2G063931
Wang, HY et al. 2019. Int J Mol Sci 21:29     Reference: December 19th, 2019
Gene Product: December 19th, 2019
Gene Model: December 19th, 2019
3 months agouce16 ubiquitin-conjugating enzyme16: homology to Arabidopsis thaliana SUMO-conjugating enzyme 1 (SCE1)
 
GRMZM2G312693
Wang, HY et al. 2019. Int J Mol Sci 21:29     Reference: December 19th, 2019
Gene Product: December 19th, 2019
Gene Model: December 19th, 2019
3 months agouce18 ubiquitin-conjugating enzyme18: homology to Arabidopsis thaliana SUMO-conjugating enzyme 1 (SCE1)
 
GRMZM2G038851
Augustine, RC et al. 2016. Plant Physiol pp.DOI: 10.1104/pp.16.00353     Reference: May 23rd, 2016
Gene Product: December 19th, 2019
Gene Model: December 19th, 2019
3 months agouce19 ubiquitin-conjugating enzyme19: homology to Arabidopsis thaliana SUMO-conjugating enzyme 1 (SCE1)
 
GRMZM2G341089
Augustine, RC et al. 2016. Plant Physiol pp.DOI: 10.1104/pp.16.00353     Reference: May 23rd, 2016
Gene Product: December 19th, 2019
Gene Model: December 19th, 2019
3 months agouce20 ubiquitin-conjugating enzyme20: homology to Arabidopsis thaliana SUMO-conjugating enzyme 1 (SCE1)
 
GRMZM2G433968
Augustine, RC et al. 2016. Plant Physiol pp.DOI: 10.1104/pp.16.00353     Reference: May 23rd, 2016
Gene Product: December 19th, 2019
Gene Model: December 19th, 2019
3 months agouce12 ubiquitin conjugating enzyme12:
8.03
GRMZM2G015287
Zhu, X-M et al. 2018. Frontiers Plant Sci 9:966     Reference: July 25th, 2018
Gene Product: December 19th, 2019
Variation: March 31st, 2005
Gene Model: July 25th, 2018
3 months agocdpk10 calcium-dependent protein kinase 10:
 
GRMZM2G320506
Parish, F et al. 2019. Front Microbiol 10:2683     Reference: December 19th, 2019
Gene Product: December 3rd, 2013
Variation: February 13th, 2008
Gene Model: March 31st, 2015
3 months agocdpk32 calcium dependent protein kinase32:
2.08
GRMZM2G099425
Parish, F et al. 2019. Front Microbiol 10:2683     Reference: December 19th, 2019
Gene Product: December 3rd, 2013
Gene Model: December 13th, 2019
3 months agomips1 myo-inositol phosphate synthase1: encodes myo-inositol phosphate synthase; may be involved in kernel phytic acid levels
1.02
GRMZM2G155242
Ostrowski, M et al. 2019. J Plant Physiol pp.doi: 10.1016/j.jplph.2019.153082     Reference: December 17th, 2019
Gene Product: July 13th, 2019
Variation: April 30th, 2011
Gene Model: April 23rd, 2013
Recommended by Ed Coe:
January 8th, 2008
3 months agoiaglu1 indol-3-ylacetyl glucosyl transferase1: single or low copy cDNA sequence matches N-terminal polypeptide sequence of purified maize indol-3-ylacetyl glucosyl transferase and, in transformed E. coli, produces a catalytically active protein
1.09
GRMZM2G024131
Ostrowski, M et al. 2019. J Plant Physiol pp.doi: 10.1016/j.jplph.2019.153082     Reference: December 17th, 2019
Gene Product: September 1st, 2003
Variation: January 30th, 2015
Gene Model: January 30th, 2015
3 months agoipp1 inositol-x-phosphate phosphatase1: Involved in the Indole-3-acetic acid (IAA) conjugation pathway
 
GRMZM2G029731
Ostrowski, M et al. 2019. J Plant Physiol pp.doi: 10.1016/j.jplph.2019.153082     Reference: December 17th, 2019
Gene Product: December 17th, 2019
Gene Model: December 17th, 2019
3 months agoIDP1627  :
6.01
GRMZM2G112238
    Variation: March 31st, 2005
Gene Model: December 17th, 2019
3 months agoiain1 IAA-inositol1: Involved in the Indole-3-acetic acid (IAA) conjugation pathway
5.04
GRMZM2G386155
Ostrowski, M et al. 2019. J Plant Physiol pp.doi: 10.1016/j.jplph.2019.153082     Reference: December 17th, 2019
Gene Product: December 17th, 2019
Gene Model: December 17th, 2019
3 months agolimtf12 LIM-transcription factor 12: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Yilmaz, A et al. 2009. Plant Physiol 149:171-180     Reference: May 12th, 2011
Gene Product: December 16th, 2019
3 months agolimtf13 LIM-transcription factor 13: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Yilmaz, A et al. 2009. Plant Physiol 149:171-180     Reference: May 12th, 2011
Gene Product: December 16th, 2019
3 months agolimtf14 LIM-transcription factor 14: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.similar to GATA type zinc finger transcription factor family protein of A. thaliana
 
   Yilmaz, A et al. 2009. Plant Physiol 149:171-180     Reference: May 12th, 2011
Gene Product: December 16th, 2019
3 months agolimtf2 LIM-transcription factor 2: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.similar to DA1-related protein 2 of A. thaliana
 
   Yilmaz, A et al. 2009. Plant Physiol 149:171-180     Reference: May 12th, 2011
Gene Product: December 16th, 2019
3 months agolimtf3 LIM-transcription factor 3: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Yilmaz, A et al. 2009. Plant Physiol 149:171-180     Reference: May 12th, 2011
Gene Product: December 16th, 2019
3 months agolimtf5 LIM-transcription factor 5: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Yilmaz, A et al. 2009. Plant Physiol 149:171-180     Reference: May 12th, 2011
Gene Product: December 16th, 2019
3 months agolimtf6 LIM-transcription factor 6: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Yilmaz, A et al. 2009. Plant Physiol 149:171-180     Reference: May 12th, 2011
Gene Product: December 16th, 2019
3 months agolimtf7 LIM-transcription factor 7: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Yilmaz, A et al. 2009. Plant Physiol 149:171-180     Reference: May 12th, 2011
Gene Product: December 16th, 2019
3 months agolimtf8 LIM-transcription factor 8: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.similar to GATA type zinc finger transcription factor family protein of A. thaliana
 
   Yilmaz, A et al. 2009. Plant Physiol 149:171-180     Reference: May 12th, 2011
Gene Product: December 16th, 2019
3 months agolimtf9 LIM-transcription factor 9: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Yilmaz, A et al. 2009. Plant Physiol 149:171-180     Reference: May 12th, 2011
Gene Product: December 16th, 2019
3 months agovp10 viviparous10: yellow endosperm, colored aleurone, green seedlings, adherent
10.07
   Ahmad, RM et al. 2019. Int J Mol Sci 20:E6202     Reference: December 16th, 2019
Gene Product: February 22nd, 2007
Variation: June 23rd, 2012
3 months agoraf1 Rubisco Assembly Factor 1: Rubisco Accumulation Factor1; promotes Rubisco assembly. (A. Barkan, 2015)Encodes a previously unstudied protein that is conserved in the green lineage and localizes to bundle sheath chloroplasts
 
GRMZM2G457621
Salesse-Smith, CE et al. 2019. Plant Biotechnol J pp.doi: 10.1111/pbi.13306     Reference: December 16th, 2019
Gene Product: October 4th, 2014
Variation: October 4th, 2014
Gene Model: October 4th, 2014
3 months agonced5 nine-cis-epoxycarotenoid dioxygenase5:
 
GRMZM2G417954
Ahmad, RM et al. 2019. Int J Mol Sci 20:E6202     Reference: December 16th, 2019
Gene Product: September 20th, 2012
Variation: September 1st, 2011
Gene Model: September 20th, 2012
3 months agolimtf1 LIM-transcription factor 1: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
1.03
GRMZM2G128206
Yilmaz, A et al. 2009. Plant Physiol 149:171-180     Reference: May 12th, 2011
Gene Product: December 16th, 2019
Variation: March 31st, 2005
Gene Model: February 12th, 2019
3 months agoIDP1988  :
6.01
GRMZM2G050705
    Variation: March 31st, 2005
Gene Model: December 16th, 2019
3 months agolimtf10 LIM-transcription factor 10: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
6.01
GRMZM2G004959
Yilmaz, A et al. 2009. Plant Physiol 149:171-180     Reference: May 12th, 2011
Gene Product: December 16th, 2019
Gene Model: December 16th, 2019
3 months agoao1 aldehyde oxidase1: functionally cloned (Sekimoto et al 1997)
1.11
GRMZM2G141535
Ahmad, RM et al. 2019. Int J Mol Sci 20:E6202     Reference: December 16th, 2019
Gene Product: May 2nd, 2012
Variation: May 30th, 2012
Gene Model: October 4th, 2014
3 months agolimtf4 LIM-transcription factor 4: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
1.05
GRMZM2G099328
Xie, GN et al. 2017. Plant Biotechnol J pp.doi: 10.1111/pbi.12763   AT4G36860 (TAIR) Reference: May 31st, 2017
Gene Product: December 16th, 2019
Variation: May 31st, 2017
Gene Model: May 31st, 2017
3 months agoals2 acetolactate synthase2: sensitive to imidazolinone herbicides; acetohydroxyacid synthase has altered herbicide inhibition kineticsSecond band mapped to this site. Acetolactate pyruvate-lyase from tobacco used as the dup(als2) probe
5.04
GRMZM2G143008
Li, YM et al. 2019. Crop J .doi: 10.1016/j.cj.2019.10.001     Reference: December 14th, 2019
Gene Product: September 1st, 2003
Variation: September 18th, 2013
Gene Model: July 27th, 2016
3 months agoals1 acetolactate synthase1: sensitive to imidazolinone herbicides; acetohydroxyacid synthase has altered herbicide inhibition kinetics
4.05
   Li, YM et al. 2019. Crop J .doi: 10.1016/j.cj.2019.10.001     Reference: December 14th, 2019
Gene Product: September 1st, 2003
Variation: September 18th, 2013
3 months agoeno1 enolase1: cDNA clone pZm245 complements enolase mutant in E. coli; leaf cDNA csu158 probes same site
9.02
   Ma, LL et al. 2019. Crop J doi: 10.1016/j.cj.2019.11.004     Reference: December 14th, 2019
Gene Product: September 1st, 2003
Variation: September 25th, 2007
3 months agocsu70  : partially sequenced leaf cDNA; single map site
6.01
GRMZM2G080546
Simcox, KD; McMullen, MD; Louie, R. 1995. Theor Appl Genet 90:341-346     Reference: September 1st, 2003
Variation: September 1st, 2003
Gene Model: December 14th, 2019
3 months agoost1 oligosaccharide transferase1: vegetative meristem cDNA 7C02F04 similar to an integral endoplasmic reticulum protein
7.02
GRMZM2G462325
Ma, LL et al. 2019. Crop J doi: 10.1016/j.cj.2019.11.004     Reference: December 14th, 2019
Gene Product: September 1st, 2003
Variation: September 1st, 2003
Gene Model: December 28th, 2016
3 months agocdpk3 calcium dependent protein kinase3: full-length cDNA, kinase function confirmed by direct assay of enzyme raised in E. coli (Saijo 1997)
2.07
GRMZM2G168706
Bin Khalid, MH et al. 2019. Int J Mol Sci 20:E6173     Reference: December 13th, 2019
Gene Product: December 3rd, 2013
Variation: September 1st, 2003
Gene Model: December 3rd, 2013
3 months agocdpk6 calcium dependent protein kinase6:
4.09
GRMZM2G035843
Bin Khalid, MH et al. 2019. Int J Mol Sci 20:E6173     Reference: December 13th, 2019
Gene Product: December 3rd, 2013
Variation: September 1st, 2003
Gene Model: December 19th, 2017
3 months agocdpk8 calcium dependent protein kinase8:
7.03
GRMZM2G154489
Bin Khalid, MH et al. 2019. Int J Mol Sci 20:E6173     Reference: December 13th, 2019
Gene Product: December 3rd, 2013
Variation: July 22nd, 2015
Gene Model: March 31st, 2015
3 months agooy1 oil yellow1: seedling oily greenish-yellow; viable; fails to convert protoporphyrin IX to Mg-protoporphyrin; oy1-t tinged green; oy1-1039, oy1-1040 lethal; Oy1-700 dominant yellow-green; gene product confirmed by transgenic expression and genetic mapping.
10.02
   Khangura, RS et al. 2019. G3 pp.doi: 10.1534/g3.119.400838     Reference: December 13th, 2019
Gene Product: June 8th, 2007
Variation: March 17th, 2011
3 months agompk1 MAP kinase1: cDNA sequence; single copy
9.06
GRMZM2G053987
Bin Khalid, MH et al. 2019. Int J Mol Sci 20:E6173     Reference: December 13th, 2019
Gene Product: July 12th, 2013
Variation: January 16th, 2013
Gene Model: July 9th, 2013
3 months agompk2 MAP kinase2: functions in brassinosteroid signaling in antioxidant defense (Zhang et al 2010) cDNA sequence; single copy (Berberich et al 1999)
9.02
GRMZM2G020216
Bin Khalid, MH et al. 2019. Int J Mol Sci 20:E6173     Reference: December 13th, 2019
Gene Product: July 12th, 2013
Variation: January 18th, 2013
Gene Model: July 9th, 2013
3 months agosimk1 salt-induced MAP kinase1:
 
GRMZM2G127141
Bin Khalid, MH et al. 2019. Int J Mol Sci 20:E6173     Reference: December 13th, 2019
Gene Product: July 12th, 2013
Gene Model: July 12th, 2013
3 months agocdpk33 calcium dependent protein kinase33:
2.06
GRMZM2G365035
Bin Khalid, MH et al. 2019. Int J Mol Sci 20:E6173     Reference: December 13th, 2019
Gene Product: December 3rd, 2013
Gene Model: December 13th, 2019
3 months agompk7 MAP kinase7:
 
GRMZM2G002100
Bin Khalid, MH et al. 2019. Int J Mol Sci 20:E6173     Reference: December 13th, 2019
Gene Product: July 12th, 2013
Variation: January 18th, 2013
Gene Model: July 9th, 2013
3 months agocdpk11 calcium dependent protein kinase11: encodes a protein that functions in abscisic acid signaling upstream of the MAP kinase encoded by mpk2, aka MPK5 (Ding et al 2012)
 
GRMZM2G047486
Bin Khalid, MH et al. 2019. Int J Mol Sci 20:E6173     Reference: December 13th, 2019
Gene Product: July 9th, 2013
Variation: April 3rd, 2015
Gene Model: July 9th, 2013
3 months agosnrkII1 SnRK2 serine threonine protein kinase1:
 
GRMZM2G035809
Bin Khalid, MH et al. 2019. Int J Mol Sci 20:E6173     Reference: December 13th, 2019
Gene Product: April 14th, 2018
Gene Model: February 11th, 2015
3 months agoprh3 protein phosphatase homolog3:
 
GRMZM2G059453
Bin Khalid, MH et al. 2019. Int J Mol Sci 20:E6173     Reference: December 13th, 2019
Gene Product: September 1st, 2003
Gene Model: October 18th, 2016
3 months agoprh8 protein phosphatase homolog8:
 
GRMZM2G122228
Bin Khalid, MH et al. 2019. Int J Mol Sci 20:E6173     Reference: December 13th, 2019
Gene Product: September 1st, 2003
Gene Model: October 18th, 2016
3 months agoprh10 protein phosphatase homolog10:
 
GRMZM2G019819
Bin Khalid, MH et al. 2019. Int J Mol Sci 20:E6173     Reference: December 13th, 2019
Gene Product: September 1st, 2003
Gene Model: October 18th, 2016
3 months agoprh14 protein phosphatase homolog14:
 
GRMZM2G102255
Bin Khalid, MH et al. 2019. Int J Mol Sci 20:E6173     Reference: December 13th, 2019
Gene Product: September 1st, 2003
Gene Model: October 18th, 2016
3 months agoprh15 protein phosphatase homolog15:
 
GRMZM2G383807
Bin Khalid, MH et al. 2019. Int J Mol Sci 20:E6173     Reference: December 13th, 2019
Gene Product: September 1st, 2003
Gene Model: October 18th, 2016
3 months agompk17 MAP kinase17:
 
GRMZM2G374088
Bin Khalid, MH et al. 2019. Int J Mol Sci 20:E6173     Reference: December 13th, 2019
Gene Product: July 12th, 2013
Gene Model: October 2nd, 2017
3 months agocdpk19 calcium dependent protein kinase19:
 
GRMZM2G028086
Bin Khalid, MH et al. 2019. Int J Mol Sci 20:E6173     Reference: December 13th, 2019
Gene Product: December 3rd, 2013
Gene Model: January 10th, 2018
3 months agocdpk23 calcium dependent protein kinase23:
 
GRMZM2G058305
Bin Khalid, MH et al. 2019. Int J Mol Sci 20:E6173     Reference: December 13th, 2019
Gene Product: December 3rd, 2013
Gene Model: January 10th, 2018
3 months agoprh18 protein phosphatase homolog18:
 
GRMZM2G437575
Bin Khalid, MH et al. 2019. Int J Mol Sci 20:E6173     Reference: December 13th, 2019
Gene Product: September 1st, 2003
Gene Model: January 19th, 2018
3 months agoprh19 protein phosphatase homolog19:
 
GRMZM2G001243
Bin Khalid, MH et al. 2019. Int J Mol Sci 20:E6173     Reference: December 13th, 2019
Gene Product: September 1st, 2003
Gene Model: January 19th, 2018
3 months agocdpk31 calcium dependent protein kinase31:
 
GRMZM2G463464
Bin Khalid, MH et al. 2019. Int J Mol Sci 20:E6173     Reference: December 13th, 2019
Gene Product: December 3rd, 2013
Gene Model: December 13th, 2019
3 months agompk4 MAP kinase4:
 
GRMZM2G123886
Bin Khalid, MH et al. 2019. Int J Mol Sci 20:E6173     Reference: December 13th, 2019
Gene Product: July 12th, 2013
Gene Model: December 13th, 2019
3 months agompk11 MAP kinase11:
 
GRMZM2G375975
Bin Khalid, MH et al. 2019. Int J Mol Sci 20:E6173     Reference: December 13th, 2019
Gene Product: July 12th, 2013
Gene Model: December 13th, 2019
3 months agompk13 MAP kinase13:
 
GRMZM2G163861
Bin Khalid, MH et al. 2019. Int J Mol Sci 20:E6173     Reference: December 13th, 2019
Gene Product: July 12th, 2013
Gene Model: December 13th, 2019
3 months agompk8 MAP kinase8:
 
GRMZM2G131334
Bin Khalid, MH et al. 2019. Int J Mol Sci 20:E6173     Reference: December 13th, 2019
Gene Product: July 12th, 2013
Gene Model: December 13th, 2019
3 months agompk16 MAP kinase16:
 
GRMZM2G034052
Bin Khalid, MH et al. 2019. Int J Mol Sci 20:E6173     Reference: December 13th, 2019
Gene Product: July 12th, 2013
Gene Model: December 13th, 2019
3 months agompk18 MAP kinase18:
 
GRMZM2G122335
Bin Khalid, MH et al. 2019. Int J Mol Sci 20:E6173     Reference: December 13th, 2019
Gene Product: July 12th, 2013
Gene Model: December 13th, 2019
3 months agompk19 MAP kinase19:
 
GRMZM2G007848
Bin Khalid, MH et al. 2019. Int J Mol Sci 20:E6173     Reference: December 13th, 2019
Gene Product: July 12th, 2013
Gene Model: December 13th, 2019
3 months agompk14 MAP kinase14:
5.03
GRMZM2G062914
Bin Khalid, MH et al. 2019. Int J Mol Sci 20:E6173     Reference: December 13th, 2019
Gene Product: July 12th, 2013
Gene Model: July 12th, 2013
3 months agompk5 MAP kinase5:
5.03
GRMZM2G048455
Bin Khalid, MH et al. 2019. Int J Mol Sci 20:E6173     Reference: December 13th, 2019
Gene Product: July 12th, 2013
Gene Model: December 13th, 2019
3 months agompk12 MAP kinase12:
6.07
GRMZM2G062761
Bin Khalid, MH et al. 2019. Int J Mol Sci 20:E6173     Reference: December 13th, 2019
Gene Product: July 12th, 2013
Gene Model: December 13th, 2019
3 months agoprh12 protein phosphatase homolog12:
6.07
   Bin Khalid, MH et al. 2019. Int J Mol Sci 20:E6173     Reference: December 13th, 2019
Gene Product: September 1st, 2003
Variation: October 18th, 2016
3 months agosnrkII11 SnRK2 serine threonine protein kinase 11:
6.05
GRMZM2G063961
Bin Khalid, MH et al. 2019. Int J Mol Sci 20:E6173     Reference: December 13th, 2019
Gene Product: April 14th, 2018
Gene Model: February 11th, 2015
3 months agosnrkII2 SnRK2 serine threonine protein kinase2: induced by cold, salt and ABA
7.04
GRMZM2G056732
Bin Khalid, MH et al. 2019. Int J Mol Sci 20:E6173     Reference: December 13th, 2019
Gene Product: April 14th, 2018
Gene Model: February 11th, 2015
3 months agosnrkII5 SnRK2 serine threonine kinase5:
10.07
GRMZM2G110908
Bin Khalid, MH et al. 2019. Int J Mol Sci 20:E6173     Reference: December 13th, 2019
Gene Product: April 14th, 2018
Gene Model: February 11th, 2015
3 months agosnrkII7 SnRK2 serine threonine protein kinase7:
2.04
GRMZM2G155593
Bin Khalid, MH et al. 2019. Int J Mol Sci 20:E6173     Reference: December 13th, 2019
Gene Product: April 14th, 2018
Gene Model: February 11th, 2015
3 months agompk3 MAP kinase3: transcript and protein activity upregulated by ABA and H2O2
1.03
GRMZM2G017792
Bin Khalid, MH et al. 2019. Int J Mol Sci 20:E6173     Reference: December 13th, 2019
Gene Product: July 9th, 2013
Variation: July 12th, 2013
Gene Model: July 9th, 2013
3 months agompk15 MAP kinase15:
6.01
GRMZM2G306028
Bin Khalid, MH et al. 2019. Int J Mol Sci 20:E6173     Reference: December 13th, 2019
Gene Product: July 12th, 2013
Gene Model: December 13th, 2019
3 months agompk9 MAP kinase9:
5.03
GRMZM2G135904
Bin Khalid, MH et al. 2019. Int J Mol Sci 20:E6173     Reference: December 13th, 2019
Gene Product: July 12th, 2013
Gene Model: December 13th, 2019
3 months agogz50 50kD gamma zein: endosperm-specific protein cDNA
7.02
GRMZM2G138689
Liu, HJ et al. 2019. Comm Biol 2:460     Reference: December 10th, 2019
Gene Product: September 22nd, 2010
Variation: September 16th, 2010
Gene Model: November 21st, 2014
3 months agonc1 Na+ content1: loss-of-function allele confers increased accumulation of Na+ in leaves, and salt hypersensitivity.
 
GRMZM2G047616
Zhang, M et al. 2019. Nature Plants 5:1297-1308     Reference: December 10th, 2019
Gene Product: November 15th, 2017
Variation: November 15th, 2017
Gene Model: November 15th, 2017
3 months agonc2 Na+ content2:
 
GRMZM2G135674
Zhang, M et al. 2019. Nature Plants 5:1297-1308     Reference: December 10th, 2019
Gene Product: November 15th, 2017
Gene Model: November 15th, 2017
3 months agosksc1 silk scar color1:
 
   Stinard, PS. 2017. MNL 91     Reference: March 21st, 2018
Variation: December 10th, 2019
3 months agocopt1 copper transporter1:
 
GRMZM2G003179
Liu, HJ et al. 2019. Comm Biol 2:460     Reference: December 10th, 2019
Gene Product: July 24th, 2018
Gene Model: July 24th, 2018
3 months agosmc2 structural maintenance of chromosomes2: essential for proper chromosome segregation and for H3 phosphorylation at Serine 10 (H3S10ph) at pericentromeres during mitotic division.
 
GRMZM2G006452
Wang, HF et al. 2019. Plant J pp.doi: 10.1111/tpj.14639   AT3G47460 (TAIR) Reference: December 10th, 2019
Gene Product: December 10th, 2019
Gene Model: December 10th, 2019
3 months agosmc4 structural maintenance of chromosomes4: essential for proper chromosome segregation and for H3 phosphorylation at Serine 10 (H3S10ph) at pericentromeres during mitotic division.
6.06
GRMZM2G383623
Wang, HF et al. 2019. Plant J pp.doi: 10.1111/tpj.14639   AT5G48600 (TAIR) Reference: December 10th, 2019
Gene Product: December 10th, 2019
Gene Model: December 10th, 2019
3 months agobap2 basal layer antifungal protein2: cDNA, multiple copies; antifungal activity; basal endosperm cell specific
4.05
   Zhang, XX et al. 2019. Mol Genet Genomics pp.doi: 10.1007/s00438-019-01631-2     Reference: December 9th, 2019
Gene Product: September 1st, 2003
Variation: September 1st, 2003
3 months agotcrr1 transfer cell response regulator1: basal endosperm transfer cell specific transcript; encoded protein is found other cells, the conducting cells above the transfer layer, and immature cells adjacent to the transfer layer
4.05
GRMZM2G016145
Zhang, XX et al. 2019. Mol Genet Genomics pp.doi: 10.1007/s00438-019-01631-2     Reference: December 9th, 2019
Variation: December 31st, 2015
Gene Model: December 31st, 2015
3 months agosweet4c sugars will eventually be exported transporter4c: Mutants are defective in seed filling
5.04
GRMZM2G137954
Zhang, XX et al. 2019. Mol Genet Genomics pp.doi: 10.1007/s00438-019-01631-2   LOC_Os02g19820 (MSU/TIGR) Reference: December 9th, 2019
Gene Product: November 4th, 2015
Variation: November 3rd, 2015
Gene Model: November 3rd, 2015
3 months agode18 defective18: Defective kernel: seed weight less than half of normal (B37) (Torti et al. 1984)
10.03
GRMZM2G091819
Zhang, XX et al. 2019. Mol Genet Genomics pp.doi: 10.1007/s00438-019-01631-2     Reference: December 9th, 2019
Gene Product: June 18th, 2018
Variation: January 21st, 2016
Gene Model: September 11th, 2012
3 months agodek36 defective kernel36: mutant kernels have a small and collapsed appearance at maturity, with a drastic size reduction in both embryo and endosperm; encodes an E+ subgroup PPR protein
 
GRMZM5G892151
Zhang, XX et al. 2019. Mol Genet Genomics pp.doi: 10.1007/s00438-019-01631-2   At4g21300 (TAIR) Reference: December 9th, 2019
Gene Product: December 27th, 2016
Variation: March 13th, 2017
Gene Model: March 13th, 2017
3 months agomlks2 Maize LINC KASH AtSINE-like2: required for normal male meiosis and pollen development and normal stomatal complex development
 
GRMZM2G000608
Gumber, HK, et al. 2019. Nucleus. 10:144-166     Reference: June 27th, 2019
Gene Product: December 7th, 2019
Variation: June 22nd, 2019
Gene Model: June 7th, 2018
3 months agoarm4 armadillo domain protein4: Mutant kernels are smaller and less plump; encodes an armadillo domain protein
4.10
GRMZM2G019284
Kong, MS et al. 2019. Plant Breed pp.doi: 10.1111/pbr.12786   At1G32260 (TAIR) Reference: December 7th, 2019
Gene Product: December 7th, 2019
Variation: December 7th, 2019
Gene Model: December 7th, 2019
3 months agocchh1 Cys2His2 Zinc Finger1: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
8.05
   Yilmaz, A et al. 2009. Plant Physiol 149:171-180     Reference: May 12th, 2011
Gene Product: December 6th, 2019
3 months agocchh35 Cys2His2 Zinc Finger35: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
10.02
GRMZM2G068710
Yilmaz, A et al. 2009. Plant Physiol 149:171-180     Reference: May 12th, 2011
Gene Product: December 6th, 2019
Gene Model: January 23rd, 2018
3 months agozfp30 putative zinc finger protein30:
4.09
GRMZM2G116079
    Gene Product: December 6th, 2019
Variation: May 19th, 2015
Gene Model: May 19th, 2015
3 months agocchh133 Cys2His2 Zinc Finger133: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Yilmaz, A et al. 2009. Plant Physiol 149:171-180     Reference: May 12th, 2011
Gene Product: December 6th, 2019
3 months agocchh2 Cys2His2 Zinc Finger2: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Yilmaz, A et al. 2009. Plant Physiol 149:171-180     Reference: May 12th, 2011
Gene Product: December 6th, 2019
3 months agocchh25 Cys2His2 Zinc Finger25: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Yilmaz, A et al. 2009. Plant Physiol 149:171-180     Reference: May 12th, 2011
Gene Product: December 6th, 2019
3 months agocchh26 Cys2His2 Zinc Finger26: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Yilmaz, A et al. 2009. Plant Physiol 149:171-180     Reference: May 12th, 2011
Gene Product: December 6th, 2019
3 months agocchh4 Cys2His2 Zinc Finger4: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Yilmaz, A et al. 2009. Plant Physiol 149:171-180     Reference: May 12th, 2011
Gene Product: December 6th, 2019
3 months agocchh46 Cys2His2 Zinc Finger46: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Yilmaz, A et al. 2009. Plant Physiol 149:171-180     Reference: May 12th, 2011
Gene Product: December 6th, 2019
3 months agocchh5 Cys2His2 Zinc Finger5: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Yilmaz, A et al. 2009. Plant Physiol 149:171-180     Reference: May 12th, 2011
Gene Product: December 6th, 2019
3 months agoznf2 Zinc finger nuclease2: located between sh1 and bz1 (Hawkins et al., 2014)
9.01
GRMZM2G478553
Hawkins, JS et al. 2014. Plant J 79:375-384     Reference: September 25th, 2015
Gene Product: December 6th, 2019
Variation: September 25th, 2015
Gene Model: September 25th, 2015
3 months agoocl4 outer cell layer4:
1.05 - 1.06
   van der Linde, K; Walbot, V. 2019. Current Topics in Developmental Biology 131:239-256     Reference: January 8th, 2019
Gene Product: September 1st, 2003
Variation: December 6th, 2019
3 months agorzfl1 RING zinc finger protein-like1:
9.06
   Alexandrov, NN, et al. 2009. Plant Mol Biol. 69:179-194     Reference: January 11th, 2009
Gene Product: December 6th, 2019
Variation: September 25th, 2007
3 months agotsh1 tassel sheath1: leaves develop at base of tassel branches and spikelet pairstsh1 was positionally cloned by Whipple et al, 2010. It was initially mapped between umc2059 and bnlg1740. The position was narrowed using a larger population, synteny with rice provided two candidate genes, one was selected based on sequencing differences from progenitors for three independent EMS alleles.
6.07
   Xu, GH, et al. 2017. New Phytol. 0:doi: 10.1111/nph.14400     Reference: February 3rd, 2017
Gene Product: December 6th, 2019
Variation: October 6th, 2011
3 months agorhcp1 ring hc protein1: expressed during brace root initiation and regulated by abiotic stresses.
 
GRMZM2G024690
Li, W-L et al. 2017. J Integrative Agric 16: 60345-60347     Reference: April 3rd, 2017
Gene Product: December 6th, 2019
Variation: April 3rd, 2017
Gene Model: April 3rd, 2017
3 months agoznfn1 zinc finger protein1:
 
GRMZM2G086277
  At5g52010 (TAIR)
LOC_Os06g07020 (MSU/TIGR)
Gene Product: December 6th, 2019
Gene Model: May 21st, 2017
3 months agoznf3 zinc finger protein3:
 
AC206217.2_FG006
Xu, JH et al. 2017. Plant Physiol Biochem 117:51-60     Reference: June 5th, 2017
Gene Product: December 6th, 2019
Gene Model: July 5th, 2019
3 months agoznf4 zinc finger protein4:
 
GRMZM2G048154
Xu, JH et al. 2017. Plant Physiol Biochem 117:51-60     Reference: June 5th, 2017
Gene Product: December 6th, 2019
Gene Model: June 5th, 2017
3 months agoznf5 zinc finger protein5:
 
GRMZM2G001205
Xu, JH et al. 2017. Plant Physiol Biochem 117:51-60     Reference: June 5th, 2017
Gene Product: December 6th, 2019
Gene Model: June 5th, 2017
3 months agoznf6 zinc finger protein6:
 
GRMZM5G804618
Xu, JH et al. 2017. Plant Physiol Biochem 117:51-60     Reference: June 5th, 2017
Gene Product: December 6th, 2019
Gene Model: June 5th, 2017
3 months agocchh6 Cys2His2 Zinc Finger6:
 
AC205250.3_FG004
Su, HH et al. 2018. J Exp Bot pp.doi: 10.1093/jxb/ery299     Reference: August 23rd, 2018
Gene Product: December 6th, 2019
Gene Model: August 23rd, 2018
3 months agocchh3 Cys2His2 Zinc Finger3: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
5.05
GRMZM2G023988
Yilmaz, A et al. 2009. Plant Physiol 149:171-180     Reference: May 12th, 2011
Gene Product: December 6th, 2019
Gene Model: January 23rd, 2018
3 months agocchh7 Cys2His2 Zinc Finger7:
7.01
GRMZM2G144645
Li, CB et al. 2018. Plant Cell pp.doi: 10.1105/tpc.18.00422     Reference: September 24th, 2018
Gene Product: December 6th, 2019
Gene Model: September 24th, 2018
4 months agocsu173  : single copy, novel leaf cDNA sequence
5.05
   Watkins, KP et al. 2019. Plant J pp.doi: 10.1111/tpj.14629     Reference: December 4th, 2019
Variation: September 1st, 2003
4 months agopsbA (cp)  :
 
   Watkins, KP et al. 2019. Plant J pp.doi: 10.1111/tpj.14629     Reference: December 4th, 2019
Gene Product: September 1st, 2003
4 months agopdrp1 PDK regulatory protein1: encodes a bifunctional protein with two activities; phosphotransferase and protein kinase
2.07
GRMZM2G131286
Watkins, KP et al. 2019. Plant J pp.doi: 10.1111/tpj.14629     Reference: December 4th, 2019
Gene Product: July 28th, 2014
Gene Model: July 28th, 2014
4 months agoatp4 ATP synthase4: Chloroplast PPR-SMR protein. Activates atpB translation. Binds atpB 5'UTR. (A. Barkan, 2015)required for normal accumulation of the chloroplast ATP synthase
 
GRMZM2G128665
Watkins, KP et al. 2019. Plant J pp.doi: 10.1111/tpj.14629     Reference: December 4th, 2019
Gene Product: December 30th, 2015
Variation: June 15th, 2013
Gene Model: June 15th, 2013
4 months agoemb17 embryo defective17: in mutants, embryogenesis is arrested at or before transition stage; encodes plastid initiation factor 3
 
GRMZM2G119691
Watkins, KP et al. 2019. Plant J pp.doi: 10.1111/tpj.14629     Reference: December 4th, 2019
Gene Product: March 8th, 2013
Variation: August 15th, 2013
Gene Model: March 8th, 2013
4 months agoatpc2 ATP synthase chloroplast subunit2: chloroplast ATP synthase (ATPC); gamma subunit based on similarity to Arabidopsis atpc1 (Belcher et al 2015)
 
GRMZM2G048907
Watkins, KP et al. 2019. Plant J pp.doi: 10.1111/tpj.14629     Reference: December 4th, 2019
Gene Product: July 17th, 2006
Variation: December 30th, 2015
Gene Model: February 17th, 2015
4 months agocp33b chloroplast RNA-binding protein33b: plastid-specific 30S ribosomal protein
 
GRMZM2G090271
Watkins, KP et al. 2019. Plant J pp.doi: 10.1111/tpj.14629   AT2G35410 (TAIR) Reference: December 4th, 2019
Variation: December 4th, 2019
Gene Model: December 4th, 2019
4 months agoriba3 monofunctional riboflavin biosynthesis proteinA3: riboflavin biosynthesis protein ribAB
 
GRMZM2G336908
Watkins, KP et al. 2019. Plant J pp.doi: 10.1111/tpj.14629   AT5G59750 (TAIR) Reference: December 4th, 2019
Variation: December 4th, 2019
Gene Model: December 4th, 2019
4 months agoIDP644  :
1.07
GRMZM2G025855
Watkins, KP et al. 2019. Plant J pp.doi: 10.1111/tpj.14629     Reference: December 4th, 2019
Variation: March 31st, 2005
Gene Model: February 14th, 2019
4 months agoIDP447  :
6.00
GRMZM5G871143
    Variation: March 31st, 2005
Gene Model: December 4th, 2019
4 months agoos1 opaque-endosperm, small germ1: opaque crown; kernel larger, lighter color; viable; reduced oil content
2.00 - 2.04
   Song, WB et al. 2018. J Integr Plant Biol pp.doi: 10.1111/jipb.12755     Reference: December 7th, 2018
Gene Product: December 3rd, 2019
Variation: December 6th, 2018
4 months agonlp1 NLP-transcription factor 1: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Yilmaz, A et al. 2009. Plant Physiol 149:171-180     Reference: May 12th, 2011
Gene Product: December 3rd, 2019
4 months agonlp10 NLP-transcription factor 10: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Yilmaz, A et al. 2009. Plant Physiol 149:171-180     Reference: May 12th, 2011
Gene Product: December 3rd, 2019
4 months agonlp11 NLP-transcription factor 11: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Yilmaz, A et al. 2009. Plant Physiol 149:171-180     Reference: May 12th, 2011
Gene Product: December 3rd, 2019
4 months agonlp12 NLP-transcription factor 12: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Yilmaz, A et al. 2009. Plant Physiol 149:171-180     Reference: May 12th, 2011
Gene Product: December 3rd, 2019
4 months agonlp13 NLP-transcription factor 13: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Ge, M et al. 2018. Plant Growth Regulation 84:95-105     Reference: December 3rd, 2019
Gene Product: December 3rd, 2019
4 months agonlp14 NLP-transcription factor 14: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Yilmaz, A et al. 2009. Plant Physiol 149:171-180     Reference: May 12th, 2011
Gene Product: December 3rd, 2019
4 months agonlp16 NLP-transcription factor 16: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Wang, YL et al. 2019. Mol Genet Genomics pp.doi: 10.1007/s00438-019-01586-4     Reference: July 10th, 2019
Gene Product: December 3rd, 2019
4 months agonlp17 NLP-transcription factor 17: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Ge, M et al. 2018. Plant Growth Regulation 84:95-105     Reference: December 3rd, 2019
Gene Product: December 3rd, 2019
4 months agoshai1 shohai1: loss of function mutants cause variable morphological defects in the embryo including small scutellum, shoot axis bifurcation and arrest during early organogenesis
 
   Mimura, M et al. 2018. Plant J pp.doi: 10.1111/tpj.13996     Reference: June 15th, 2018
Gene Product: December 3rd, 2019
Variation: June 15th, 2018
4 months agonlp3 NLP-transcription factor 3: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Ge, M et al. 2018. Plant Growth Regulation 84:95-105     Reference: December 3rd, 2019
Gene Product: December 3rd, 2019
4 months agonlp4 NLP-transcription factor 4: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Ge, M et al. 2018. Plant Growth Regulation 84:95-105     Reference: December 3rd, 2019
Gene Product: December 3rd, 2019
4 months agonlp5 NLP-transcription factor 5: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Yilmaz, A et al. 2009. Plant Physiol 149:171-180     Reference: May 12th, 2011
Gene Product: December 3rd, 2019
4 months agonlp6 NLP-transcription factor 6: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Ge, M et al. 2018. Plant Growth Regulation 84:95-105     Reference: December 3rd, 2019
Gene Product: December 3rd, 2019
4 months agonlp8 NLP-transcription factor 8: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Ge, M et al. 2018. Plant Growth Regulation 84:95-105     Reference: December 3rd, 2019
Gene Product: December 3rd, 2019
4 months agonlp9 NLP-transcription factor 9: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
10.04
GRMZM2G105004
Ge, M et al. 2018. Plant Growth Regulation 84:95-105     Reference: December 3rd, 2019
Gene Product: December 3rd, 2019
Variation: July 29th, 2004
Gene Model: October 21st, 2018
4 months agonlp7 NLP-transcription factor 7: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
1.01
GRMZM2G109509
Ge, M et al. 2018. Plant Growth Regulation 84:95-105     Reference: December 3rd, 2019
Gene Product: December 3rd, 2019
Gene Model: October 7th, 2017
4 months agonrt1 nitrate transport1:
 
GRMZM2G010251
Ge, M et al. 2018. Plant Growth Regulation 84:95-105     Reference: December 3rd, 2019
Gene Product: September 1st, 2003
Gene Model: September 10th, 2014
4 months agonlp15 NLP-transcription factor 15: involved in modulating the nitrogen responseLocus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
5.03
GRMZM2G042278
Ge, M et al. 2019. Plant J pp.doi: 10.1111/tpj.14628     Reference: December 3rd, 2019
Gene Product: December 3rd, 2019
Variation: December 3rd, 2019
Gene Model: October 7th, 2017
4 months agoumc1378  :
7.00
GRMZM2G333337
    Variation: September 1st, 2003
Gene Model: December 1st, 2019
4 months agorpl5a 60S ribosomal protein L5-1 homolog a: endosperm cDNA 5C05D11 (uaz189), similar to ribosomal protein
3.05
GRMZM5G815894
Helentjaris, T et al. 1994. MNL 68:101-104     Reference: September 1st, 2003
Gene Product: December 1st, 2019
Variation: April 9th, 2011
Gene Model: December 28th, 2016
4 months agorpl5b 60S ribosomal protein L5-1 homolog b:
 
GRMZM2G163081
    Gene Product: December 1st, 2019
Variation: April 9th, 2011
Gene Model: July 28th, 2016
4 months agorpl5c 60S ribosomal protein L5, mitochondrial-like homolog c:
 
GRMZM5G831780
    Gene Product: December 1st, 2019
Gene Model: December 1st, 2019
4 months agoupl1 ubiquitin-protein ligase1: encodes a HECT (homologous to the E6AP carboxyl terminus) domain E3 ubiquitin ligase
2.07
GRMZM2G080439
Li, YF et al. 2019. Genetica pp.doi: 10.1007/s10709-019-00080-4     Reference: November 19th, 2019
Gene Product: November 26th, 2019
Gene Model: February 14th, 2018
4 months agopco090876  :
4.08
GRMZM2G111818
    Gene Product: November 26th, 2019
Gene Model: November 26th, 2019
4 months agoupl2 ubiquitin-protein ligase2: encodes a HECT (homologous to the E6AP carboxyl terminus) domain E3 ubiquitin ligase
 
GRMZM2G049141
Li, YF et al. 2019. Genetica pp.doi: 10.1007/s10709-019-00080-4     Reference: November 19th, 2019
Gene Product: November 26th, 2019
Gene Model: November 19th, 2019
4 months agoupl3 ubiquitin-protein ligase3: encodes a HECT (homologous to the E6AP carboxyl terminus) domain E3 ubiquitin ligase
 
GRMZM2G411536
Li, YF et al. 2019. Genetica pp.doi: 10.1007/s10709-019-00080-4     Reference: November 19th, 2019
Gene Product: November 26th, 2019
Gene Model: November 19th, 2019
4 months agoupl4 ubiquitin-protein ligase4: encodes a HECT (homologous to the E6AP carboxyl terminus) domain E3 ubiquitin ligase
 
GRMZM2G461948
Li, YF et al. 2019. Genetica pp.doi: 10.1007/s10709-019-00080-4     Reference: November 19th, 2019
Gene Product: November 26th, 2019
Gene Model: November 19th, 2019
4 months agoupl5 ubiquitin-protein ligase5: encodes a HECT (homologous to the E6AP carboxyl terminus) domain E3 ubiquitin ligase
 
GRMZM2G034622
Li, YF et al. 2019. Genetica pp.doi: 10.1007/s10709-019-00080-4     Reference: November 19th, 2019
Gene Product: November 26th, 2019
Gene Model: November 19th, 2019
4 months agoupl6 ubiquitin-protein ligase6: encodes a HECT (homologous to the E6AP carboxyl terminus) domain E3 ubiquitin ligase
 
GRMZM2G124297
Li, YF et al. 2019. Genetica pp.doi: 10.1007/s10709-019-00080-4     Reference: November 19th, 2019
Gene Product: November 26th, 2019
Gene Model: November 19th, 2019
4 months agoupl7 ubiquitin-protein ligase7: encodes a HECT (homologous to the E6AP carboxyl terminus) domain E3 ubiquitin ligase
 
GRMZM2G380619
Li, YF et al. 2019. Genetica pp.doi: 10.1007/s10709-019-00080-4     Reference: November 19th, 2019
Gene Product: November 26th, 2019
Gene Model: November 19th, 2019
4 months agoupl8 ubiquitin-protein ligase8: encodes a HECT (homologous to the E6AP carboxyl terminus) domain E3 ubiquitin ligase
 
   Li, YF et al. 2019. Genetica pp.doi: 10.1007/s10709-019-00080-4     Reference: November 19th, 2019
Gene Product: November 26th, 2019
4 months agoupl9 ubiquitin-protein ligase9: encodes a HECT (homologous to the E6AP carboxyl terminus) domain E3 ubiquitin ligase
 
GRMZM2G021299
Li, YF et al. 2019. Genetica pp.doi: 10.1007/s10709-019-00080-4     Reference: November 19th, 2019
Gene Product: November 26th, 2019
Gene Model: November 19th, 2019
4 months agoupl10 ubiquitin-protein ligase10: encodes a HECT (homologous to the E6AP carboxyl terminus) domain E3 ubiquitin ligase
 
GRMZM2G328988
Li, YF et al. 2019. Genetica pp.doi: 10.1007/s10709-019-00080-4     Reference: November 19th, 2019
Gene Product: November 26th, 2019
Gene Model: November 19th, 2019
4 months agoupl11 ubiquitin-protein ligase11: encodes a HECT (homologous to the E6AP carboxyl terminus) domain E3 ubiquitin ligase
 
GRMZM2G101098
Li, YF et al. 2019. Genetica pp.doi: 10.1007/s10709-019-00080-4     Reference: November 19th, 2019
Gene Product: November 26th, 2019
Gene Model: November 19th, 2019
4 months agoupl12 ubiquitin-protein ligase12: encodes a HECT (homologous to the E6AP carboxyl terminus) domain E3 ubiquitin ligase
 
GRMZM2G331368
Li, YF et al. 2019. Genetica pp.doi: 10.1007/s10709-019-00080-4     Reference: November 19th, 2019
Gene Product: November 26th, 2019
Gene Model: November 19th, 2019
4 months agovpp2 vacuolar proton pump2: etiolated leaf cDNA, 5' sequence similar to plant vacuolar ATPase, subunit B
9.03
GRMZM2G094497
Dong, ZB et al. 2018. Nucl Acid Res 46:5012-5028     Reference: November 22nd, 2019
Gene Product: September 1st, 2003
Variation: May 15th, 2015
Gene Model: May 15th, 2015
4 months agorf2 restorer of fertility2: see rf1; cDNA prf2a complements E. coli mutant deficient in aldehyde dehydrogenase; mitochondrial
9.03
   Dong, ZB et al. 2018. Nucl Acid Res 46:5012-5028     Reference: November 22nd, 2019
Gene Product: September 1st, 2003
Variation: December 18th, 2006
4 months agocdo202a(mcf)  : similar to Arabidopsis adenine nucleotide transporter 1
6.07
GRMZM2G067877
Dong, ZB et al. 2018. Nucl Acid Res 46:5012-5028     Reference: November 22nd, 2019
Variation: August 30th, 2018
Gene Model: August 30th, 2018
4 months agoumc1170  :
9.02
GRMZM2G016323
Dong, ZB et al. 2018. Nucl Acid Res 46:5012-5028     Reference: November 22nd, 2019
Variation: September 1st, 2003
Gene Model: March 7th, 2018
4 months agopdk1 pyruvate, orthophosphate dikinase1: cDNA, genomic and peptide sequences; microsatellite mapped (SSRs phi025, phi078, phi081; nc012 ); cytosolic or plastidic, dependent on transcript processingmutant seedlings are pale green and lethal once kernel reserves are exhaused, even when plants were grown under 2% CO2
6.05
GRMZM2G306345
Dong, ZB et al. 2018. Nucl Acid Res 46:5012-5028     Reference: November 22nd, 2019
Gene Product: July 28th, 2014
Variation: April 18th, 2018
Gene Model: November 21st, 2012
4 months agomate1 multidrug and toxic compound extrusion1: confers aluminum tolerance in lines that carry 3 adjacent identical copies of the mate1 gene (Maron et al 2013)
 
GRMZM5G870170
Dong, ZB et al. 2018. Nucl Acid Res 46:5012-5028     Reference: November 22nd, 2019
Gene Product: August 17th, 2015
Variation: March 19th, 2013
Gene Model: March 19th, 2013
4 months agome2 NADP-dependent malic enzyme2: cDNA in roots, preprotein contains chloroplast transit peptide sequences and is imported and processed; C3-like enzyme
6.05
GRMZM2G122479
Dong, ZB et al. 2018. Nucl Acid Res 46:5012-5028     Reference: November 22nd, 2019
Gene Product: June 27th, 2019
Variation: August 24th, 2014
Gene Model: August 21st, 2014
4 months agosut7 sucrose transporter7: single copy cDNA; transcripts observed in mature leaf blades of young plants, and at reproductive stage in various tissues including leaf sheaths, culms, husks, pedicels, with little transcript detected in silks and developing kernels.
9.07
GRMZM2G087901
Dong, ZB et al. 2018. Nucl Acid Res 46:5012-5028     Reference: November 22nd, 2019
Gene Product: September 14th, 2013
Variation: April 13th, 2017
Gene Model: April 17th, 2013
4 months agoAY110260  :
6.05
GRMZM2G319109
Dong, ZB et al. 2018. Nucl Acid Res 46:5012-5028     Reference: November 22nd, 2019
Variation: September 25th, 2007
Gene Model: August 27th, 2018
4 months agomstr4 monosaccharide transporter4:
9.04
GRMZM2G034061
Dong, ZB et al. 2018. Nucl Acid Res 46:5012-5028     Reference: November 22nd, 2019
Variation: July 14th, 2008
Gene Model: September 17th, 2015
4 months agoels5 early leaf senescence5: mutant has an early leaf senescence phenotype
 
   Chai, M et al. 2019. Genes 10: 944     Reference: November 22nd, 2019
Variation: November 22nd, 2019
4 months agopco093173  :
6.06
GRMZM2G044137
Dong, ZB et al. 2018. Nucl Acid Res 46:5012-5028     Reference: November 22nd, 2019
Variation: September 25th, 2007
Gene Model: November 22nd, 2019
4 months agoAY107496  :
9.01
   Dong, ZB et al. 2018. Nucl Acid Res 46:5012-5028     Reference: November 22nd, 2019
Variation: September 25th, 2007
4 months agoglb1 globulin1: was prot1; electrophoretic mobility, null allele is known; embryo protein; SSRs phi011, 055, 094
1.09
   Zheng, XX, et al. 2019. Plant Cell. 0:doi: 10.1105/tpc.19.00444     Reference: November 21st, 2019
Gene Product: September 1st, 2003
Variation: January 29th, 2015
4 months agoglb2 globulin2: presence-absence
1.11
   Zheng, XX, et al. 2019. Plant Cell. 0:doi: 10.1105/tpc.19.00444     Reference: November 21st, 2019
Gene Product: September 1st, 2003
Variation: March 30th, 2009
4 months agovp1 viviparous1: embryo fails to become dormant, viable if transplanted; some alleles dormant; chlorophyll and carotenoids unaffected; anthocyanins in aleurone suppressed (aka vp4); cDNA
3.05
   Zheng, XX, et al. 2019. Plant Cell. 0:doi: 10.1105/tpc.19.00444     Reference: November 21st, 2019
Gene Product: July 29th, 2015
Variation: August 22nd, 2013
4 months agoy9 pale yellow9: pale endosperm, slightly viviparous; green to pale green seedlings and plants; accumulates 9,15,9'-tri-cis-zeta carotene in dark
10.03 - 10.03
GRMZM2G011746
Wurtzel, E; Beltran, J. 2020. Methods in Molecular Biology 2083:53-61     Reference: November 21st, 2019
Gene Product: December 10th, 2011
Variation: September 28th, 2011
Gene Model: September 22nd, 2011
4 months agoesp5 embryo specific protein5: (was Emb5); cDNA clone, embryo specific, ABA responsive, deduced amino acid sequence very hydrophilic and gly/glu-rich (aka emb5)
6.05
GRMZM2G162659
Zheng, XX, et al. 2019. Plant Cell. 0:doi: 10.1105/tpc.19.00444     Reference: November 21st, 2019
Variation: September 1st, 2003
Gene Model: July 27th, 2016
4 months agopyl3 pyrabactin resistance-like protein3: plays role in plant drought resistance (He et al., 2018)
 
GRMZM2G154987
Zheng, XX, et al. 2019. Plant Cell. 0:doi: 10.1105/tpc.19.00444     Reference: November 21st, 2019
Gene Product: April 21st, 2018
Gene Model: April 21st, 2018
4 months agostk5 serine/threonine-protein kinase5:
 
GRMZM2G334791
Zheng, XX, et al. 2019. Plant Cell. 0:doi: 10.1105/tpc.19.00444     Reference: November 21st, 2019
Gene Product: May 13th, 2014
Gene Model: September 19th, 2019
4 months agostiff1 stiff stalk1: mutants have strong stalks
 
GRMZM2G360081
Zhang, ZH, et al. 2019. Plant Cell. 0:doi: 10.1105/tpc.19.00486     Reference: November 21st, 2019
Gene Product: July 25th, 2017
Variation: November 5th, 2019
Gene Model: November 5th, 2019
4 months agozim32 ZIM-transcription factor 32: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Fu, JY et al. 2019. Plant Cell Rep pp.doi: 10.1007/s00299-019-02490-2     Reference: November 20th, 2019
Variation: February 17th, 2019
4 months agocdpk13 calcium dependent protein kinase13: E. coli expressed fusion protein does not appear to require calcium
 
GRMZM2G173928
Zheng, ZH et al. 2019. Plant Physiol pp.doi: 10.1104/pp.19.00752     Reference: November 19th, 2019
Gene Product: December 3rd, 2013
Variation: November 15th, 2013
Gene Model: March 31st, 2015
4 months agowc1 white cap1: dominant Wc1 kernels have pale yellow endosperm if Y1 (pearly white with y1); whiteness is emphasized in soft-starch crowns
9.07
   Zheng, ZH et al. 2019. Plant Physiol pp.doi: 10.1104/pp.19.00752     Reference: November 19th, 2019
Gene Product: September 20th, 2012
Variation: October 5th, 2012
4 months agocitt1 citrate transporter1:
1.01
GRMZM2G028521
Zheng, ZH et al. 2019. Plant Physiol pp.doi: 10.1104/pp.19.00752     Reference: November 19th, 2019
Variation: April 26th, 2016
Gene Model: April 26th, 2016
4 months agoumc15a  :
4.08
GRMZM2G013128
Zheng, ZH et al. 2019. Plant Physiol pp.doi: 10.1104/pp.19.00752     Reference: November 19th, 2019
Variation: September 1st, 2003
Gene Model: June 7th, 2018
4 months agostp1 sugar transport1: leaf cDNA csu142 similar to yeast plasma membrane sugar transport protein, single copy
8.03
   Zheng, ZH et al. 2019. Plant Physiol pp.doi: 10.1104/pp.19.00752     Reference: November 19th, 2019
Gene Product: September 1st, 2003
Variation: August 26th, 2015
4 months agorfa1 replication factor A homolog1: endosperm cDNA 5C09D05, similar to yeast DNA binding protein
 
   Zheng, ZH et al. 2019. Plant Physiol pp.doi: 10.1104/pp.19.00752     Reference: November 19th, 2019
Gene Product: September 1st, 2003
Variation: December 30th, 2010
4 months agosrph1 SGT1 disease resistance protein homolog1: interacts with RACK1 protein involved in disease resistance (Wang et al 2014)
3.09
GRMZM2G105019
Zheng, ZH et al. 2019. Plant Physiol pp.doi: 10.1104/pp.19.00752     Reference: November 19th, 2019
Variation: March 31st, 2005
Gene Model: March 23rd, 2015
4 months agogt1 grassy tillers1: numerous basal branches; vegetatively totipotent in combination with id1 and factors for perennialismputative transcription factor that reduces branching, and is induced by shade
1.04
GRMZM2G005624
Liu, L et al. 2019. Mol Breed 39:157     Reference: November 18th, 2019
Gene Product: March 5th, 2012
Variation: August 18th, 2011
Gene Model: March 5th, 2012
4 months agolg1 liguleless1: In the liguleless1 mutant, ligule and auricle are missing; leaves are upright
2.01
   Liu, L et al. 2019. Mol Breed 39:157     Reference: November 18th, 2019
Gene Product: December 18th, 2014
Variation: November 8th, 2007
4 months agozhd21 ZF-HD-transcription factor 21: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
3.05
GRMZM5G821755
Liu, L et al. 2019. Mol Breed 39:157     Reference: November 18th, 2019
Variation: March 21st, 2018
Gene Model: March 21st, 2018
4 months agowox3a WUSCHEL homeobox 3A: embryonic transcription factor; expression in embryonic leaf similar to wox3b, but distinct from ns1/ns2 also in the wox3 gene family (Nardmann et al 2007)
6.01
GRMZM2G122537
Liu, L et al. 2019. Mol Breed 39:157     Reference: November 18th, 2019
Gene Product: August 25th, 2017
Variation: August 19th, 2018
Gene Model: August 18th, 2018
4 months agoyab1 C2C2-YABBY-transcription factor 1: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Liu, L et al. 2019. Mol Breed 39:157     Reference: November 18th, 2019
Gene Product: October 16th, 2015
4 months agotcptf21 TCP-transcription factor 21: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Liu, L et al. 2019. Mol Breed 39:157     Reference: November 18th, 2019
Gene Product: September 27th, 2019
4 months agoaco1 aconitase1: electrophoretic mobility; monomeric
4.04
GRMZM2G020801
Eprintsev, AT et al. 2015. J Plant Physiol 181:14-19     Reference: November 15th, 2019
Gene Product: September 1st, 2003
Variation: March 28th, 2015
Gene Model: March 28th, 2015
4 months agoaco3 aconitase3: electrophoretic mobility
9.07
GRMZM2G009808
Eprintsev, AT et al. 2015. J Plant Physiol 181:14-19     Reference: November 15th, 2019
Gene Product: September 1st, 2003
Gene Model: March 29th, 2015
4 months agokrp15 kinesin-related protein15:
10.04
GRMZM2G054418
Zhang, J et al. 2019. Physiol Plant pp.doi: 10.1111/ppl.13048     Reference: November 15th, 2019
Gene Product: November 10th, 2017
Variation: January 3rd, 2013
Gene Model: March 3rd, 2016
4 months agoAI668346  :
2.08
GRMZM2G464000
Zhang, J et al. 2019. Physiol Plant pp.doi: 10.1111/ppl.13048     Reference: November 15th, 2019
Variation: July 29th, 2004
Gene Model: January 30th, 2018
4 months agoaco6 aconitase6:
 
GRMZM2G364988
Eprintsev, AT et al. 2019. Plant Physiol Biochem pp.doi: 10.1016/j.plaphy.2019.11.018     Reference: November 15th, 2019
Gene Product: September 1st, 2003
Gene Model: November 15th, 2019
4 months agoaco7 aconitase7:
 
GRMZM2G036131
    Gene Product: September 1st, 2003
Gene Model: November 15th, 2019
4 months agoaco8 aconitase8:
 
GRMZM2G467338
    Gene Product: September 1st, 2003
Gene Model: November 15th, 2019
4 months agoaco9 aconitase9:
 
GRMZM2G029204
    Gene Product: September 1st, 2003
Gene Model: November 15th, 2019
4 months agoaco10 aconitase10:
 
GRMZM2G127429
    Gene Product: September 1st, 2003
Gene Model: November 15th, 2019
4 months agoaco11 aconitase11:
 
GRMZM2G311024
    Gene Product: September 1st, 2003
Gene Model: November 15th, 2019
4 months agoaco2 aconitase2: electrophoretic mobility
10.04
GRMZM5G858454
Eprintsev, AT et al. 2019. Plant Physiol Biochem pp.doi: 10.1016/j.plaphy.2019.11.018     Reference: November 15th, 2019
Gene Product: September 1st, 2003
Variation: September 3rd, 2013
Gene Model: March 29th, 2015
4 months agops1 pink scutellum1: (aka vp7, lyc1, lycB) some alleles viviparous; endosperm and scutellum pink, seedling white with pink flush
5.04 - 5.04
   He, WW et al. 2019. Food Chemistry pp.doi: 10.1016/j.foodchem.2019.125779.     Reference: November 11th, 2019
Gene Product: December 10th, 2011
Variation: March 30th, 2011
4 months agovp5 viviparous5: like vp2cDNA, strongest hybridization to this site; other sites are near o2, bnl17.25 and dup103; encodes a 2-step phytoene desaturase; SSR umc1070
1.02 - 1.02
   He, WW et al. 2019. Food Chemistry pp.doi: 10.1016/j.foodchem.2019.125779.     Reference: November 11th, 2019
Gene Product: December 13th, 2011
Variation: March 4th, 2014
4 months agovp9 viviparous9: (was y7, z1, zds1) like vp2; vp9-4889 dormant, pale aleurone, pale green seedling
7.02
GRMZM2G454952
He, WW et al. 2019. Food Chemistry pp.doi: 10.1016/j.foodchem.2019.125779.     Reference: November 11th, 2019
Gene Product: December 13th, 2011
Variation: March 25th, 2017
Gene Model: March 24th, 2017
4 months agohyd4 hydroxylase4: beta-carotene hydroxylase
 
GRMZM2G164318
He, WW et al. 2019. Food Chemistry pp.doi: 10.1016/j.foodchem.2019.125779.     Reference: November 11th, 2019
Gene Product: December 13th, 2011
Variation: September 3rd, 2011
Gene Model: April 9th, 2013
4 months agocyp14 cytochrome P450 14: encodes CYP97C
 
GRMZM2G143202
He, WW et al. 2019. Food Chemistry pp.doi: 10.1016/j.foodchem.2019.125779.     Reference: November 11th, 2019
Gene Product: June 3rd, 2015
Variation: June 3rd, 2015
Gene Model: April 8th, 2013
4 months agotipd1 tip growth defective1: contributes to root hair elongation and drought tolerance
 
GRMZM2G087806
Zhang, XM et al. 2019. Plant Biotechnol J pp.doi: 10.1111/pbi.13290   AT5G20350 (TAIR) Reference: November 8th, 2019
Gene Product: November 8th, 2019
Variation: November 8th, 2019
Gene Model: November 8th, 2019
4 months agocdpk30 calcium dependent protein kinase30: encodes a calcium-dependent protein kinase
 
GRMZM2G112057
Zhang, XM et al. 2019. Plant Biotechnol J pp.doi: 10.1111/pbi.13290     Reference: November 8th, 2019
Gene Product: December 3rd, 2013
Gene Model: November 8th, 2019
4 months agovp16 viviparous16: novel vivipary mutation found in cross of W22::Mu and Z31
 
   Liu, ST et al. 2019. Int J Mol Sci 20:5586     Reference: November 8th, 2019
Variation: November 8th, 2019
4 months agoadh1 alcohol dehydrogenase1: electrophoretic mobility; null alleles are known; dimeric; intra/interlocus hybrid bands occur); SSR umc1726
1.10
   Chaengsakul, C et al. 2019. J Integr Agric 18:2435-2445     Reference: November 7th, 2019
Gene Product: July 8th, 2009
Variation: March 22nd, 2006
4 months agoaox1 alternative oxidase1 : primers give PCR product closely similar to alternative oxidase in other species
2.02
AC233960.1_FG002
Chaengsakul, C et al. 2019. J Integr Agric 18:2435-2445     Reference: November 7th, 2019
Gene Product: February 22nd, 2012
Variation: February 22nd, 2012
Gene Model: February 17th, 2012
4 months agoatp11 ATPase11:
 
GRMZM2G115372
Chaengsakul, C et al. 2019. J Integr Agric 18:2435-2445     Reference: November 7th, 2019
Gene Product: November 7th, 2019
Gene Model: November 7th, 2019
4 months agocox11 cytochrome c oxidase11:
 
GRMZM2G338696
Chaengsakul, C et al. 2019. J Integr Agric 18:2435-2445     Reference: November 7th, 2019
Gene Product: September 1st, 2003
Gene Model: November 7th, 2019
4 months agordph1 reducing plant height1: over-expression leads to plants with significantly shorter and wider mesocotyls with parenchyma cells showing reduced length but increased width
 
GRMZM2G114190
Li, W et al. 2019. Plant Biotechnol J pp.doi: 10.1111/pbi.13292     Reference: November 7th, 2019
Gene Product: November 7th, 2019
Gene Model: November 7th, 2019
5 months agorad51c recombination protein51 gene c: mutant is both male and female sterile
 
GRMZM2G123089
Jing, JL et al. 2019. Int J Mol Sci 20:5513     Reference: November 5th, 2019
Gene Product: August 12th, 2016
Variation: November 5th, 2019
Gene Model: June 19th, 2014
5 months agomads67 MADS-transcription factor 67: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
7.04
GRMZM2G147716
Wu, JR et al. 2019. Proc Natl Acad Sci, USA pp.doi; 10.1073/pnas.1902593116     Reference: November 5th, 2019
Gene Product: September 1st, 2003
Gene Model: February 7th, 2019
5 months agotlc14 TRAM/LAG/CRN8 14: encodes a TLC (TRAM/LAG/CRN8) domain protein
8.01
GRMZM2G020148
Si, WN et al. 2019. Int J Mol Sci 20:5484     Reference: November 4th, 2019
Gene Product: November 4th, 2019
Variation: September 1st, 2003
Gene Model: September 14th, 2018
5 months agotlc17 TRAM/LAG/CRN8 17: encodes a TLC (TRAM/LAG/CRN8) domain protein
8.08
GRMZM5G825226
Si, WN et al. 2019. Int J Mol Sci 20:5484     Reference: November 4th, 2019
Gene Product: November 4th, 2019
Gene Model: September 2nd, 2018
5 months agotlc6 TRAM/LAG/CRN8 6: encodes a TLC (TRAM/LAG/CRN8) domain protein
3.06
GRMZM2G077279
Si, WN et al. 2019. Int J Mol Sci 20:5484     Reference: November 4th, 2019
Gene Product: November 4th, 2019
Gene Model: November 4th, 2019
5 months agotlc7 TRAM/LAG/CRN8 7: encodes a TLC (TRAM/LAG/CRN8) domain protein
3.06
GRMZM2G021589
Si, WN et al. 2019. Int J Mol Sci 20:5484     Reference: November 4th, 2019
Gene Product: November 4th, 2019
Gene Model: November 4th, 2019
5 months agotlc1 TRAM/LAG/CRN8 1: encodes a TLC (TRAM/LAG/CRN8) domain protein
 
GRMZM2G151521
Si, WN et al. 2019. Int J Mol Sci 20:5484     Reference: November 4th, 2019
Gene Product: November 4th, 2019
Gene Model: November 4th, 2019
5 months agotlc2 TRAM/LAG/CRN8 2: encodes a TLC (TRAM/LAG/CRN8) domain protein
 
GRMZM2G429128
Si, WN et al. 2019. Int J Mol Sci 20:5484     Reference: November 4th, 2019
Gene Product: November 4th, 2019
Gene Model: November 4th, 2019
5 months agotlc3 TRAM/LAG/CRN8 3: encodes a TLC (TRAM/LAG/CRN8) domain protein
 
GRMZM2G138330
Si, WN et al. 2019. Int J Mol Sci 20:5484     Reference: November 4th, 2019
Gene Product: November 4th, 2019
Gene Model: November 4th, 2019
5 months agotlc4 TRAM/LAG/CRN8 4: encodes a TLC (TRAM/LAG/CRN8) domain protein
 
GRMZM2G132084
Si, WN et al. 2019. Int J Mol Sci 20:5484     Reference: November 4th, 2019
Gene Product: November 4th, 2019
Gene Model: November 4th, 2019
5 months agotlc5 TRAM/LAG/CRN8 5: encodes a TLC (TRAM/LAG/CRN8) domain protein
 
GRMZM2G163426
Si, WN et al. 2019. Int J Mol Sci 20:5484     Reference: November 4th, 2019
Gene Product: November 4th, 2019
Gene Model: November 4th, 2019
5 months agotlc8 TRAM/LAG/CRN8 8: encodes a TLC (TRAM/LAG/CRN8) domain protein
 
GRMZM2G170868
Si, WN et al. 2019. Int J Mol Sci 20:5484     Reference: November 4th, 2019
Gene Product: November 4th, 2019
Gene Model: November 4th, 2019
5 months agotlc9 TRAM/LAG/CRN8 9: encodes a TLC (TRAM/LAG/CRN8) domain protein
 
AC210013.4_FG012
Si, WN et al. 2019. Int J Mol Sci 20:5484     Reference: November 4th, 2019
Gene Product: November 4th, 2019
Gene Model: November 4th, 2019
5 months agotlc11 TRAM/LAG/CRN8 11: encodes a TLC (TRAM/LAG/CRN8) domain protein
 
GRMZM2G444643
Si, WN et al. 2019. Int J Mol Sci 20:5484     Reference: November 4th, 2019
Gene Product: November 4th, 2019
Gene Model: November 4th, 2019
5 months agotlc12 TRAM/LAG/CRN8 12: encodes a TLC (TRAM/LAG/CRN8) domain protein
 
GRMZM2G315726
Si, WN et al. 2019. Int J Mol Sci 20:5484     Reference: November 4th, 2019
Gene Product: November 4th, 2019
Gene Model: November 4th, 2019
5 months agotlc13 TRAM/LAG/CRN8 13: encodes a TLC (TRAM/LAG/CRN8) domain protein
 
GRMZM2G016551
Si, WN et al. 2019. Int J Mol Sci 20:5484     Reference: November 4th, 2019
Gene Product: November 4th, 2019
Gene Model: November 4th, 2019
5 months agotlc15 TRAM/LAG/CRN8 15: encodes a TLC (TRAM/LAG/CRN8) domain protein
 
   Si, WN et al. 2019. Int J Mol Sci 20:5484     Reference: November 4th, 2019
Gene Product: November 4th, 2019
5 months agotlc16 TRAM/LAG/CRN8 16: encodes a TLC (TRAM/LAG/CRN8) domain protein
 
GRMZM2G075023
Si, WN et al. 2019. Int J Mol Sci 20:5484     Reference: November 4th, 2019
Gene Product: November 4th, 2019
Gene Model: November 4th, 2019
5 months agotlc18 TRAM/LAG/CRN8 18: encodes a TLC (TRAM/LAG/CRN8) domain protein
 
GRMZM2G083427
Si, WN et al. 2019. Int J Mol Sci 20:5484     Reference: November 4th, 2019
Gene Product: November 4th, 2019
Gene Model: November 4th, 2019
5 months agotlc10 TRAM/LAG/CRN8 10: encodes a TLC (TRAM/LAG/CRN8) domain protein
5.02
GRMZM2G016184
Si, WN et al. 2019. Int J Mol Sci 20:5484     Reference: November 4th, 2019
Gene Product: November 4th, 2019
Gene Model: November 4th, 2019
5 months agomterf10 mTERF domain protein10: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Yang, Y-Z et al. 2019. Plant Cell Physiol pp.doi: 10.1093/pcp/pcz204     Reference: November 2nd, 2019
Gene Product: February 19th, 2015
Variation: June 14th, 2019
5 months agoppr20 pentatricopeptide repeat 20: mutants arrest maize seed development; display slow embryo and endosperm development
 
GRMZM5G818978
Yang, Y-Z et al. 2019. Plant Cell Physiol pp.doi: 10.1093/pcp/pcz204     Reference: November 2nd, 2019
Gene Product: December 27th, 2016
Variation: November 2nd, 2019
Gene Model: November 2nd, 2019
5 months agobd1 branched silkless1: ear silkless with indeterminate branches at base; tassel proliferated, bushy
7.05
GRMZM2G307119
Leiboff, S; Hake, S. 2019. Curr Biol. 0:doi: 10.1016/j.cub.2019.08.044   At5g18560 (TAIR)
LOC_Os01g21820 (MSU/TIGR)
Os07g0669500 (Gramene)
Reference: October 30th, 2019
Gene Product: July 27th, 2009
Variation: August 13th, 2011
Gene Model: July 14th, 2011
5 months agora1 ramosa1: ear and tassel many-branched; tassel branches taper to tip
7.02
   Leiboff, S; Hake, S. 2019. Curr Biol. 0:doi: 10.1016/j.cub.2019.08.044     Reference: October 30th, 2019
Gene Product: April 11th, 2007
Variation: August 20th, 2010
5 months agose1 sugary-enhancer1: high sugar content with su1; light yellow endosperm; freely wrinkled in Ill677a
2.10 - 2.10
AC217415.3_FG004
Zhang, X, et al. 2019. Proc Natl Acad Sci, USA. 0:doi: 10.1073/pnas.1902747116     Reference: October 30th, 2019
Gene Product: September 24th, 2019
Variation: May 4th, 2015
Gene Model: May 2nd, 2015
5 months agobde1 bearded-ear1: floral development MADS box transcription factor; recessive mutant has silky-polytypic-like ear
5.06
   Leiboff, S; Hake, S. 2019. Curr Biol. 0:doi: 10.1016/j.cub.2019.08.044   AT2G45650 (TAIR) Reference: October 30th, 2019
Gene Product: April 1st, 2011
Variation: October 5th, 2009
5 months agozag1 Zea AGAMOUS homolog1: amino acid sequence, deduced from cDNA to inflorescence mRNA, 61% identical to Arabidopsis floral homeotic gene protein AG1; expression strong in female inflorescence; possibly pt1; SSR umc1187
6.05
   Leiboff, S; Hake, S. 2019. Curr Biol. 0:doi: 10.1016/j.cub.2019.08.044     Reference: October 30th, 2019
Gene Product: September 1st, 2003
Variation: January 2nd, 2015
5 months agowrky67 WRKY-transcription factor 67: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Bo, C et al. 2019. Plant Cell Rep pp.doi: 10.1007/s00299-019-02481-3     Reference: October 29th, 2019
Gene Product: July 24th, 2017
5 months agorafs1 raffinose synthase1: mutants have significantly reduced seed vigor
3.03
GRMZM2G150906
Han, QH et al. 2019. Plant Cell Physiol pp.doi: 10.1093/pcp/pcz200     Reference: October 23rd, 2019
Gene Product: October 25th, 2019
Variation: March 23rd, 2018
Gene Model: March 23rd, 2018
5 months agorafs2 raffinose synthase2:
 
GRMZM2G050177
Li, T et al. 2017. Molecular Plant 10:1540-1555     Reference: March 1st, 2018
Gene Product: October 25th, 2019
Gene Model: March 1st, 2018
5 months agorafs3 raffinose synthase3:
 
   Li, T et al. 2017. Molecular Plant 10:1540-1555     Reference: March 1st, 2018
Gene Product: October 25th, 2019
5 months agommt1 methionine S-methyltransferase1:
8.05
GRMZM2G098031
Bourgis, F. 1999. Plant Cell. 11:1485-1498     Reference: July 19th, 2004
Gene Product: October 25th, 2019
Variation: September 20th, 2018
Gene Model: September 20th, 2018
5 months agocyc10 cyclin10: Associates to cyclin dependent kinase proteins during germination and the complexes formed develop kinase activity.
 
GRMZM2G107377
Qiao, P et al. 2019. G3 pp.doi: 10.1534/g3.119.400757     Reference: October 24th, 2019
Gene Product: June 26th, 2009
Variation: December 21st, 2016
Gene Model: December 21st, 2016
5 months agoaasr5 abscisic acid stress ripening5:
10.04
GRMZM2G052100
Han, QH et al. 2019. Plant Cell Physiol pp.doi: 10.1093/pcp/pcz200     Reference: October 23rd, 2019
Gene Product: November 4th, 2011
Variation: April 14th, 2007
Gene Model: November 1st, 2011
5 months agoga2ox12 gibberellin 2-oxidase12:
 
GRMZM2G177104
Zhang, Y et al. 2019. Plants doi: 10.3390/plants8100432     Reference: October 23rd, 2019
Gene Product: October 27th, 2014
Gene Model: October 30th, 2014
5 months agohma6 heavy metal ATPase6:
4.08
GRMZM2G315931
Cao, YH et al. 2019. PeerJ doi: 10.7717/peerj.7877     Reference: October 23rd, 2019
Gene Product: October 23rd, 2019
Gene Model: October 23rd, 2019
5 months agohma4 heavy metal ATPase4:
 
GRMZM2G455491
Cao, YH et al. 2019. PeerJ doi: 10.7717/peerj.7877     Reference: October 23rd, 2019
Gene Product: October 23rd, 2019
Gene Model: January 27th, 2018
5 months agohma2 heavy metal ATPase2: associated with leaf Cd concentration under low Cd condition at the seedling stage
 
GRMZM2G099191
Cao, YH et al. 2019. PeerJ doi: 10.7717/peerj.7877     Reference: October 23rd, 2019
Gene Product: October 23rd, 2019
Gene Model: October 23rd, 2019
5 months agohma1 heavy metal ATPase1:
 
GRMZM2G067853
Cao, YH et al. 2019. PeerJ doi: 10.7717/peerj.7877     Reference: October 23rd, 2019
Gene Product: October 23rd, 2019
Gene Model: October 23rd, 2019
5 months agohma5 heavy metal ATPase5:
 
GRMZM2G144083
Cao, YH et al. 2019. PeerJ doi: 10.7717/peerj.7877     Reference: October 23rd, 2019
Gene Product: October 23rd, 2019
Gene Model: October 23rd, 2019
5 months agohma7 heavy metal ATPase7:
 
GRMZM2G029951
Cao, YH et al. 2019. PeerJ doi: 10.7717/peerj.7877     Reference: October 23rd, 2019
Gene Product: October 23rd, 2019
Gene Model: October 23rd, 2019
5 months agohma8 heavy metal ATPase8:
 
GRMZM5G855347
Cao, YH et al. 2019. PeerJ doi: 10.7717/peerj.7877     Reference: October 23rd, 2019
Gene Product: October 23rd, 2019
Gene Model: October 23rd, 2019
5 months agohma9 heavy metal ATPase9:
 
GRMZM2G151406
Cao, YH et al. 2019. PeerJ doi: 10.7717/peerj.7877     Reference: October 23rd, 2019
Gene Product: October 23rd, 2019
Gene Model: October 23rd, 2019
5 months agohma10 heavy metal ATPase10:
 
GRMZM2G143512
Cao, YH et al. 2019. PeerJ doi: 10.7717/peerj.7877     Reference: October 23rd, 2019
Gene Product: October 23rd, 2019
Gene Model: October 23rd, 2019
5 months agohma11 heavy metal ATPase11:
 
GRMZM2G010152
Cao, YH et al. 2019. PeerJ doi: 10.7717/peerj.7877     Reference: October 23rd, 2019
Gene Product: October 23rd, 2019
Gene Model: October 23rd, 2019
5 months agodbf3 DRE-binding protein3: regulates rafs1 expression and raffinose biosynthesis and plant chilling stress tolerance
2.07
   Han, QH et al. 2019. Plant Cell Physiol pp.doi: 10.1093/pcp/pcz200     Reference: October 23rd, 2019
Gene Product: April 10th, 2013
Variation: October 23rd, 2019
5 months agopin9 PIN-formed protein9: similar to Arabidopsis PIN9 (Forestan et al 2012)
3.06
GRMZM5G859099
Wang, X et al. 2019. Ann Bot pp.doi: 10.1093/aob/mcz154     Reference: October 21st, 2019
Gene Product: April 21st, 2014
Gene Model: January 24th, 2013
5 months agocyc3 cyclin3: classIII; sense RNA functions in Xenopus oocytes; SSR umc1186
6.02
   Wang, X et al. 2019. Ann Bot pp.doi: 10.1093/aob/mcz154     Reference: October 21st, 2019
Gene Product: June 26th, 2009
Variation: January 17th, 2014
5 months agocyc7 cyclin7: Class I; sense RNA functions in Xenopus oocytes
3.06
GRMZM2G073003
Wang, X et al. 2019. Ann Bot pp.doi: 10.1093/aob/mcz154     Reference: October 21st, 2019
Gene Product: June 26th, 2009
Variation: October 23rd, 2012
Gene Model: August 16th, 2019
5 months agotir1 transport inhibitor response1: encodes a member of a class of F-BOX proteins shown to bind auxin and facilitate degradation of the transcriptional repressor Aux/IAA proteins
 
GRMZM2G135978
Wang, X et al. 2019. Ann Bot pp.doi: 10.1093/aob/mcz154   LOC_Os05g05800 (MSU/TIGR)
Os05g0150500 (Gramene)
Reference: October 21st, 2019
Gene Product: July 25th, 2017
Gene Model: December 28th, 2018
5 months agoaas8 auxin amido synthetase8: encodes an auxin-responsive indole-3-acetic acid-amido synthetase (GH3)
 
GRMZM2G053338
Feng, SG et al. 2014. J Integr Plant Biol 57:783-795     Reference: October 21st, 2019
Gene Product: October 21st, 2019
Gene Model: October 21st, 2019
5 months agoaas1 auxin amido synthetase1: encodes an auxin-responsive indole-3-acetic acid-amido synthetase (GH3)
 
GRMZM2G068701
Feng, SG et al. 2014. J Integr Plant Biol 57:783-795     Reference: October 21st, 2019
Gene Product: October 21st, 2019
Gene Model: October 21st, 2019
5 months agoaas2 auxin amido synthetase2: encodes an auxin-responsive indole-3-acetic acid-amido synthetase (GH3)
 
GRMZM2G378106
Wang, X et al. 2019. Ann Bot pp.doi: 10.1093/aob/mcz154     Reference: October 21st, 2019
Gene Product: October 21st, 2019
Gene Model: October 21st, 2019
5 months agoaas3 auxin amido synthetase3: encodes an auxin-responsive indole-3-acetic acid-amido synthetase (GH3)
 
GRMZM2G410567
Feng, SG et al. 2014. J Integr Plant Biol 57:783-795   AT1G28130 (TAIR) Reference: October 21st, 2019
Gene Product: October 21st, 2019
Gene Model: October 21st, 2019
5 months agoaas4 auxin amido synthetase4: encodes an auxin-responsive indole-3-acetic acid-amido synthetase (GH3)
 
GRMZM2G061005
Feng, SG et al. 2014. J Integr Plant Biol 57:783-795     Reference: October 21st, 2019
Gene Product: October 21st, 2019
Gene Model: October 21st, 2019
5 months agoaas5 auxin amido synthetase5: encodes an auxin-responsive indole-3-acetic acid-amido synthetase (GH3)
 
GRMZM2G060991
Feng, SG et al. 2014. J Integr Plant Biol 57:783-795     Reference: October 21st, 2019
Gene Product: October 21st, 2019
Gene Model: October 21st, 2019
5 months agoaas6 auxin amido synthetase6: encodes an auxin-responsive indole-3-acetic acid-amido synthetase (GH3)
 
GRMZM2G061515
Feng, SG et al. 2014. J Integr Plant Biol 57:783-795     Reference: October 21st, 2019
Gene Product: October 21st, 2019
Gene Model: October 21st, 2019
5 months agoaas7 auxin amido synthetase7: encodes an auxin-responsive indole-3-acetic acid-amido synthetase (GH3)
 
GRMZM2G033359
Feng, SG et al. 2014. J Integr Plant Biol 57:783-795     Reference: October 21st, 2019
Gene Product: October 21st, 2019
Gene Model: October 21st, 2019
5 months agoaas9 auxin amido synthetase9: encodes an auxin-responsive indole-3-acetic acid-amido synthetase (GH3)
 
GRMZM2G414460
Feng, SG et al. 2014. J Integr Plant Biol 57:783-795   AT2G47750 (TAIR) Reference: October 21st, 2019
Gene Product: October 21st, 2019
Gene Model: October 21st, 2019
5 months agoaas11 auxin amido synthetase11: encodes an auxin-responsive indole-3-acetic acid-amido synthetase (GH3)
 
GRMZM2G162413
Feng, SG et al. 2014. J Integr Plant Biol 57:783-795     Reference: October 21st, 2019
Gene Product: October 21st, 2019
Gene Model: October 21st, 2019
5 months agoaas12 auxin amido synthetase12: encodes an auxin-responsive indole-3-acetic acid-amido synthetase (GH3)
 
GRMZM2G366873
Feng, SG et al. 2014. J Integr Plant Biol 57:783-795     Reference: October 21st, 2019
Gene Product: October 21st, 2019
Gene Model: October 21st, 2019
5 months agoaas13 auxin amido synthetase13: encodes an auxin-responsive indole-3-acetic acid-amido synthetase (GH3)
 
GRMZM2G091276
Feng, SG et al. 2014. J Integr Plant Biol 57:783-795     Reference: October 21st, 2019
Gene Product: October 21st, 2019
Gene Model: October 21st, 2019
5 months agoaas10 auxin amido synthetase10: encodes an auxin-responsive indole-3-acetic acid-amido synthetase (GH3)
8.03
GRMZM2G001421
Feng, SG et al. 2014. J Integr Plant Biol 57:783-795     Reference: October 21st, 2019
Gene Product: October 21st, 2019
Gene Model: October 21st, 2019
5 months agopin1 PIN-formed protein1: gene product cross-reacts with anti-AtPIN1 antibody and in tassel and ear, the PIN proteins are localized to a group of cells in subepidermal meristematic layers.
9.01
GRMZM2G398650
Wang, X et al. 2019. Ann Bot pp.doi: 10.1093/aob/mcz154     Reference: October 21st, 2019
Gene Product: April 21st, 2014
Variation: January 20th, 2015
Gene Model: June 7th, 2012
5 months agovpp10 vacuolar proton pump10: encodes a vacuolar H+-ATPase subunit
 
GRMZM2G163233
Kang, C et al. 2019. Int J Mol Sci 20:E5125     Reference: October 19th, 2019
Gene Product: September 1st, 2003
Gene Model: October 19th, 2019
5 months agonactf87 NAC-transcription factor 87: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Jimenez-Galindo, JC et al. 2019. BMC Plant Biology pp.doi: 10.1186/s12870-019-2052-z     Reference: October 17th, 2019
Gene Product: July 8th, 2019
5 months agoclt1 clumped tassel1: dominant Clt1 plants have variable dwarfing, developmental anomalies
8.06 - 8.06
GRMZM2G017305
Lau, KH. 2016. Co-orthologs of KATANIN1 impact plant morphology and show differential evolution in maize. Ph.D. dissertation, Purdue University, 145pp     Reference: October 15th, 2019
Gene Product: October 15th, 2019
Variation: October 16th, 2019
Gene Model: October 15th, 2019
5 months agoufg25  : Candidate for kernel row number trait (qKRN5b)
5.01
GRMZM2G094900
Shen, XM et al. 2019. Theor Appl Genet pp.doi: 10.1007/s00122-019-03436-8     Reference: October 15th, 2019
Variation: October 15th, 2019
Gene Model: June 16th, 2018
5 months agoktn2 katanin2: paralog of clt1
 
GRMZM2G054663
Lau, KH. 2016. Co-orthologs of KATANIN1 impact plant morphology and show differential evolution in maize. Ph.D. dissertation, Purdue University, 145pp     Reference: October 15th, 2019
Gene Product: October 15th, 2019
Variation: October 15th, 2019
Gene Model: October 15th, 2019
5 months agotcptf39 TCP-transcription factor 39: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Gyawali, A et al. 2019. BMC Plant Biology 19:412     Reference: October 8th, 2019
Gene Product: September 27th, 2019
5 months agostk2 serine-threonine kinase2: Sequence orthologous to rice stk2, in maize BAC contig overlapping b0178I03 and b0004G18 (Alleman 2006)
2.04
GRMZM2G179268
Javeed, A et al. 2019. Applied Ecology and Environmental Research 17:1789-11802     Reference: October 7th, 2019
Gene Product: May 13th, 2014
Gene Model: January 9th, 2017
Recommended by Ed Coe:
May 1st, 2007
5 months agoafd1 absence of first division1: male and female sterility; early meiosis
6.07
GRMZM2G059037
Dukowic-Schulze, S et al. 2014. BMC Plant Biology 14:118   AT5G05490 (TAIR)
LOC_Os05g50410 (MSU/TIGR)
Os05g0580500 (Gramene)
Reference: October 7th, 2019
Gene Product: July 30th, 2009
Variation: August 11th, 2011
Gene Model: July 14th, 2011
5 months agomus1 MutS homolog1: cDNA similar to E. coli mutS
7.04
GRMZM2G056075
Dukowic-Schulze, S et al. 2014. BMC Plant Biology 14:118     Reference: October 7th, 2019
Gene Product: August 15th, 2005
Variation: January 28th, 2013
Gene Model: August 5th, 2015
5 months agozyp1 synaptonemal complex protein ZIPPER1: Homlogous to Yeast ZIPPER1 (ZIP1), Arabidopsis ZYP1 and rice ZEP1.
 
GRMZM2G143590
Dukowic-Schulze, S et al. 2014. BMC Plant Biology 14:118     Reference: October 7th, 2019
Gene Product: March 2nd, 2011
Variation: March 2nd, 2011
Gene Model: June 19th, 2014
5 months agozip5 zinc-regulated, iron-regulated transporter-like protein5:
6.04
GRMZM2G064382
Dukowic-Schulze, S et al. 2014. BMC Plant Biology 14:118     Reference: October 7th, 2019
Gene Product: June 5th, 2019
Variation: September 1st, 2003
Gene Model: August 25th, 2018
5 months agosweet11a sugars will eventually be exported transporter11:
1.06
GRMZM2G368827
Lopez-Coria, M et al. 2019. Genes doi: 10.3390/genes10100780     Reference: October 7th, 2019
Gene Product: November 4th, 2015
Gene Model: November 3rd, 2015
5 months agohp3 histidine-containing phosphotransfer protein3:
4.08
GRMZM2G451604
Dukowic-Schulze, S et al. 2014. BMC Plant Biology 14:118     Reference: October 7th, 2019
Variation: April 4th, 2015
Gene Model: April 4th, 2015
5 months agosweet6b sugars will eventually be exported transporter6b:
 
GRMZM2G416965
Lopez-Coria, M et al. 2019. Genes doi: 10.3390/genes10100780     Reference: October 7th, 2019
Gene Product: November 4th, 2015
Gene Model: November 3rd, 2015
5 months agosweet13b sugars will eventually be exported transporter13b:
 
GRMZM2G021706
Lopez-Coria, M et al. 2019. Genes doi: 10.3390/genes10100780     Reference: October 7th, 2019
Gene Product: November 4th, 2015
Variation: February 17th, 2018
Gene Model: November 3rd, 2015
5 months agosweet14b sugars will eventually be exported transporter14b:
 
GRMZM2G015976
Lopez-Coria, M et al. 2019. Genes doi: 10.3390/genes10100780     Reference: October 7th, 2019
Gene Product: November 4th, 2015
Gene Model: November 3rd, 2015
5 months agodmc1 disrupted meiotic cDNA homolog1:
 
GRMZM2G109618
Dukowic-Schulze, S et al. 2014. BMC Plant Biology 14:118     Reference: October 7th, 2019
Variation: May 12th, 2017
Gene Model: January 27th, 2017
5 months agomre11a meiotic recombination protein 11 homolog A: transgenic expression has positive role in plant salt tolerance (Luo et al., 2019)
 
GRMZM2G106056
Dukowic-Schulze, S et al. 2014. BMC Plant Biology 14:118     Reference: October 7th, 2019
Variation: May 10th, 2017
Gene Model: January 27th, 2017
5 months agosweet13a sugars will eventually be exported transporter13a:
10.03
GRMZM2G173669
Lopez-Coria, M et al. 2019. Genes doi: 10.3390/genes10100780     Reference: October 7th, 2019
Gene Product: November 4th, 2015
Variation: February 17th, 2018
Gene Model: December 28th, 2017
5 months agostk1 serine threonine kinase1: mutants have reduced pollen transmission
9.02
   Javeed, A et al. 2019. Applied Ecology and Environmental Research 17:1789-11802     Reference: October 7th, 2019
Gene Product: May 13th, 2014
Variation: October 10th, 2018
5 months agobub3 budding inhibited by benzimidazoles homolog3: encodes WD40 repeat-like superfamily protein that is a mitotic checkpoint
9.02
GRMZM5G899300
Dukowic-Schulze, S et al. 2014. BMC Plant Biology 14:118     Reference: October 7th, 2019
Variation: January 16th, 2017
Gene Model: January 15th, 2017
6 months agoasg75  : NCBI: similar to Arabidopsis lipase class 3 family protein
1.04
GRMZM5G882821
de O Buanafina, MM et al. 2019. Planta pp.doi: 10.1007/s00425-019-03288-y     Reference: October 3rd, 2019
Variation: September 19th, 2009
Gene Model: June 30th, 2017
6 months agoaldh22 aldehyde dehydrogenase22: NCBI: similar to Arabidopsis aldehyde dehydrogenase 22A1
7.06
GRMZM2G135341
Zhou, ML et al. 2012. Funct Integr Genomics 12:683-691     Reference: October 2nd, 2019
Gene Product: September 1st, 2003
Variation: April 11th, 2017
Gene Model: April 11th, 2017
6 months agogpn1 glyceraldehyde-3-phosphate deHaseN1: cDNA sequence
4.05
GRMZM2G035268
Zhou, ML et al. 2012. Funct Integr Genomics 12:683-691     Reference: October 2nd, 2019
Gene Product: September 1st, 2003
Variation: June 8th, 2010
Gene Model: July 27th, 2016
6 months agoaldh5 aldehyde dehydrogenase5: cDNA similar to rf2 (prf2d-exprA7); complements E. coli
3.09
GRMZM2G097706
Zhou, ML et al. 2012. Funct Integr Genomics 12:683-691     Reference: October 2nd, 2019
Gene Product: June 28th, 2005
Variation: June 20th, 2012
Gene Model: September 30th, 2015
6 months agomis1 putative aldehyde dehydrogenase MIS1:
 
GRMZM2G090087
Zhou, ML et al. 2012. Funct Integr Genomics 12:683-691     Reference: October 2nd, 2019
Gene Product: September 1st, 2003
Variation: January 15th, 2011
Gene Model: January 22nd, 2016
6 months agoaldh7 aldehyde dehydrogenase7:
 
GRMZM2G365483
Zhou, ML et al. 2012. Funct Integr Genomics 12:683-691     Reference: October 2nd, 2019
Gene Product: September 1st, 2003
Gene Model: October 2nd, 2019
6 months agoaldh8 aldehyde dehydrogenase8:
 
GRMZM2G325115
Zhou, ML et al. 2012. Funct Integr Genomics 12:683-691     Reference: October 2nd, 2019
Gene Product: September 1st, 2003
Gene Model: October 2nd, 2019
6 months agoaldh14 aldehyde dehydrogenase14:
 
GRMZM2G060800
Zhou, ML et al. 2012. Funct Integr Genomics 12:683-691     Reference: October 2nd, 2019
Gene Product: September 1st, 2003
Gene Model: October 2nd, 2019
6 months agoaldh11 aldehyde dehydrogenase11:
 
GRMZM2G013214
Zhou, ML et al. 2012. Funct Integr Genomics 12:683-691     Reference: October 2nd, 2019
Gene Product: September 1st, 2003
Gene Model: October 2nd, 2019
6 months agoaldh15 aldehyde dehydrogenase15:
 
GRMZM2G119482
Zhou, ML et al. 2012. Funct Integr Genomics 12:683-691     Reference: October 2nd, 2019
Gene Product: September 1st, 2003
Gene Model: October 2nd, 2019
6 months agoaldh16 aldehyde dehydrogenase16:
 
GRMZM2G128114
Zhou, ML et al. 2012. Funct Integr Genomics 12:683-691     Reference: October 2nd, 2019
Gene Product: September 1st, 2003
Gene Model: October 2nd, 2019
6 months agoaldh18 aldehyde dehydrogenase18:
 
GRMZM2G122172
Zhou, ML et al. 2012. Funct Integr Genomics 12:683-691     Reference: October 2nd, 2019
Gene Product: September 1st, 2003
Gene Model: October 2nd, 2019
6 months agoaldh19 aldehyde dehydrogenase19:
 
GRMZM2G365440
Zhou, ML et al. 2012. Funct Integr Genomics 12:683-691     Reference: October 2nd, 2019
Gene Product: September 1st, 2003
Gene Model: October 2nd, 2019
6 months agoaldh23 aldehyde dehydrogenase23:
 
GRMZM2G407949
Zhou, ML et al. 2012. Funct Integr Genomics 12:683-691     Reference: October 2nd, 2019
Gene Product: September 1st, 2003
Gene Model: October 2nd, 2019
6 months agoaldh25 aldehyde dehydrogenase25:
 
GRMZM2G103546
Zhou, ML et al. 2012. Funct Integr Genomics 12:683-691     Reference: October 2nd, 2019
Gene Product: September 1st, 2003
Gene Model: October 2nd, 2019
6 months agoaldh26 aldehyde dehydrogenase26:
 
GRMZM2G135470
Zhou, ML et al. 2012. Funct Integr Genomics 12:683-691     Reference: October 2nd, 2019
Gene Product: September 1st, 2003
Gene Model: October 2nd, 2019
6 months agoaldh27 aldehyde dehydrogenase27:
 
GRMZM2G155502
Zhou, ML et al. 2012. Funct Integr Genomics 12:683-691     Reference: October 2nd, 2019
Gene Product: September 1st, 2003
Gene Model: October 2nd, 2019
6 months agoaldh28 aldehyde dehydrogenase28:
 
GRMZM2G354187
Zhou, ML et al. 2012. Funct Integr Genomics 12:683-691     Reference: October 2nd, 2019
Gene Product: September 1st, 2003
Gene Model: October 2nd, 2019
6 months agoaldh9 aldehyde dehydrogenase9:
 
GRMZM2G016189
Zhou, ML et al. 2012. Funct Integr Genomics 12:683-691     Reference: October 2nd, 2019
Gene Product: September 1st, 2003
Gene Model: October 2nd, 2019
6 months agoaldh10 aldehyde dehydrogenase10:
 
GRMZM5G811837
Zhou, ML et al. 2012. Funct Integr Genomics 12:683-691     Reference: October 2nd, 2019
Gene Product: September 1st, 2003
Gene Model: October 2nd, 2019
6 months agoaldh12 aldehyde dehydrogenase12:
 
GRMZM5G820733
Zhou, ML et al. 2012. Funct Integr Genomics 12:683-691     Reference: October 2nd, 2019
Gene Product: September 1st, 2003
Gene Model: October 2nd, 2019
6 months agoaldh13 aldehyde dehydrogenase13:
 
GRMZM2G118800
Zhou, ML et al. 2012. Funct Integr Genomics 12:683-691     Reference: October 2nd, 2019
Gene Product: September 1st, 2003
Gene Model: October 2nd, 2019
6 months agoaldh20 aldehyde dehydrogenase20:
 
GRMZM2G130440
Zhou, ML et al. 2012. Funct Integr Genomics 12:683-691     Reference: October 2nd, 2019
Gene Product: September 1st, 2003
Gene Model: October 2nd, 2019
6 months agoaldh24 aldehyde dehydrogenase24:
 
GRMZM2G398633
Zhou, ML et al. 2012. Funct Integr Genomics 12:683-691     Reference: October 2nd, 2019
Gene Product: September 1st, 2003
Gene Model: October 2nd, 2019
6 months agoaldh21 aldehyde dehydrogenase21:
7.02
GRMZM2G001898
Zhou, ML et al. 2012. Funct Integr Genomics 12:683-691     Reference: October 2nd, 2019
Gene Product: September 1st, 2003
Gene Model: October 2nd, 2019
6 months agoaldh2 aldehyde dehydrogenase2: cDNA similar to rf2; transgene in E. coli shows aldehyde dehydrogenase activity, but unable to complement the ALDH deficient E. coli mutant; mitochondrial location inferred from presence of leader sequence
4.06
GRMZM2G125268
Zhou, ML et al. 2012. Funct Integr Genomics 12:683-691     Reference: October 2nd, 2019
Gene Product: September 1st, 2003
Variation: May 13th, 2009
Gene Model: September 30th, 2015
6 months agoaldh3 aldehyde dehydrogenase3: cDNA sequence similar to rf2; complements E. coli JA111 with defective ALDH
3.09
GRMZM2G071021
Zhou, ML et al. 2012. Funct Integr Genomics 12:683-691     Reference: October 2nd, 2019
Gene Product: June 28th, 2005
Variation: May 20th, 2009
Gene Model: October 6th, 2015
6 months agoznf1 zinc finger protein1: glucose starved, root tip cDNA
9.03
GRMZM5G836222
Marques, TL et al. 2020. Acta Scientiarum Agronomy 42: e43479     Reference: September 30th, 2019
Gene Product: September 1st, 2003
Variation: January 14th, 2019
Gene Model: January 13th, 2019
6 months agofbl41 F-box protein41: mutants have greater resistance to Rhizoctonia solani; rice overexpressing ZmFBL41 showed elevated susceptibility to R. solani.
 
GRMZM2G109140
Li, N et al. 2019. Nature Genetics pp.doi: 10.1038/s41588-019-0503-y     Reference: September 30th, 2019
Gene Product: July 25th, 2017
Variation: September 30th, 2019
Gene Model: September 30th, 2019
6 months agoscro1 scarecrow1: mRNA expressed in endodermis and quiescent center of root, influencing radial pattern
4.08
GRMZM2G131516
Hughes, TE et al. 2019. Development pp.doi: 10.1242/dev.177543     Reference: September 28th, 2019
Gene Product: June 24th, 2019
Variation: June 24th, 2019
Gene Model: November 11th, 2012
Recommended by Ed Coe:
January 25th, 2007
6 months agogras37 GRAS-transcription factor 37: In double mutants with scro1, most leaf veins are separated by one rather than two mesophyll cells Hughes et al., 2019)
 
   Hughes, TE et al. 2019. Development pp.doi: 10.1242/dev.177543     Reference: September 28th, 2019
Gene Product: June 24th, 2019
Variation: June 24th, 2019
6 months agowab1 Wavy auricles in blades1: dominant confers auricle tissue in blade portion of leafrecessive mutants showed extremely acute tassel branch angles accompanied by a significant reduction in the size of the pulvinus compared with normal plants
2.06 - 2.07
GRMZM2G110242
Pecher, P et al. 2019. PloS Pathogens 15: e1008035   LOC_Os09g24480 (MSU/TIGR)
Os09g0410500 (Gramene)
Reference: September 27th, 2019
Gene Product: September 14th, 2016
Variation: November 2nd, 2014
Gene Model: November 2nd, 2014
6 months agotcptf10 TCP-transcription factor 10: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Pecher, P et al. 2019. PloS Pathogens 15: e1008035     Reference: September 27th, 2019
Gene Product: September 27th, 2019
6 months agotcptf11 TCP-transcription factor 11: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Pecher, P et al. 2019. PloS Pathogens 15: e1008035     Reference: September 27th, 2019
Gene Product: September 27th, 2019
6 months agotcptf12 TCP-transcription factor 12: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Pecher, P et al. 2019. PloS Pathogens 15: e1008035     Reference: September 27th, 2019
Gene Product: September 27th, 2019
6 months agotcptf13 TCP-transcription factor 13: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Pecher, P et al. 2019. PloS Pathogens 15: e1008035     Reference: September 27th, 2019
Gene Product: September 27th, 2019
6 months agotcptf14 TCP-transcription factor 14: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Pecher, P et al. 2019. PloS Pathogens 15: e1008035     Reference: September 27th, 2019
Gene Product: September